RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 TECPR1Q7Z6L1 1165 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 OAFQ86UD1 273 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 CPXCR1Q8N123 301 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 ACVR1CQ8NER5 493 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 OR9Q2Q8NGE9 314 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 OR4K15Q8NH41 348 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 SMAP2Q8WU79 429 aaPredicted RBP4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 TMEM203Q969S6 136 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 FBXO17Q96EF6 278 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 OR4K3Q96R72 315 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 MTERF1Q99551 399 aaKnown RBP4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 ATF6BQ99941 703 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 ADAT1Q9BUB4 502 aaKnown RBP4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 SUCNR1Q9BXA5 334 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 TLNRD1Q9H1K6 362 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 CNTD2Q9H8S5 307 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 ACSS1Q9NUB1 689 aaPredicted RBP4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 CLN6Q9NWW5 311 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 ZSCAN32Q9NX65 697 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 ZNF226Q9NYT6 803 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 NTMQ9P121 344 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 ZDHHC8Q9ULC8 765 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 SLC9A8Q9Y2E8 581 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 CCDC187A0A096LP49 1063 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 ABHD14A-ACY1A0A1B0GW23 586 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 TISP43B9A030 160 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 M0R143 59 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 SCAMP2O15127 329 aaKnown RBP4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 TMEM127O75204 238 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 SPDEFO95238 335 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 GALTP07902 379 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 ITGA5P08648 1049 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 RAB5AP20339 215 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 IGFBP6P24592 240 aaPredicted RBP4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 GIFP27352 417 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 NOVP48745 357 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 SRP9P49458 86 aaKnown RBP4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 CTBP2P56545 445 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 OR2B8PP59922 312 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 CNTN1Q12860 1018 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 LCP2Q13094 533 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 HAGHQ16775 308 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 C14orf28Q4W4Y0 310 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 USP39Q53GS9 565 aaKnown RBP4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 ZNF805Q5CZA5 627 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 ZNF678Q5SXM1 525 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 HIST2H3PS2Q5TEC6 136 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 ATG9BQ674R7 924 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 C22orf42Q6IC83 251 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 APOBEC3HQ6NTF7 200 aaKnown RBP4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 SLC39A4Q6P5W5 647 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 ABHD13Q7L211 337 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 PPP1R3BQ86XI6 285 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 DAW1Q8N136 415 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 C10orf53Q8N6V4 93 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 MFSD9Q8NBP5 474 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 HSD17B11Q8NBQ5 300 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 OR52P1PQ8NH57 321 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 JOSD2Q8TAC2 188 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 MRGPRDQ8TDS7 321 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 HOXB13Q92826 284 aaPredicted RBP4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 PNPLA2Q96AD5 504 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 LENG9Q96B70 501 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 CMTM7Q96FZ5 175 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 SFXN1Q9H9B4 322 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 CYSLTR2Q9NS75 346 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 TAS2R10Q9NYW0 307 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 HACL1Q9UJ83 578 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 LOC285556D6RIA3 1793 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 A0A1W2PR48 441 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 TBC1D3BA6NDS4 549 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 SNRPGP15A8MWD9 76 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 TP53I11O14683 189 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 EIF4E2O60573 245 aaKnown RBP4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 SH3BGRLO75368 114 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 CSO75390 466 aaKnown RBP4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 SLC25A27O95847 323 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 FABP3P05413 133 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 NPSP0C0P6 89 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 THEGLP0DJG4 465 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 SAT1P21673 171 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 AVPR1BP47901 424 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 PPM1FP49593 454 aaPredicted RBP4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 JAK3P52333 1124 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 DIO3P55073 304 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 CDC42P60953 191 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 UFM1P61960 85 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 PPIAP62937 165 aaKnown RBP4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 EIF5AP63241 154 aaKnown RBP4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 IL10RBQ08334 325 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 ZSWIM7Q19AV6 140 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 PLK5Q496M5 336 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 ZRANB3Q5FWF4 1079 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 TBC1D3GQ6DHY5 549 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 SLC30A6Q6NXT4 461 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 ZNF549Q6P9A3 640 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 RNF165Q6ZSG1 346 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 OTOP2Q7RTS6 562 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 P4HA3Q7Z4N8 544 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 CCDC117Q8IWD4 279 aaPredicted RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms