RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 ITGAMP11215 1152 aa13.63□□□□□ -0.23
LMNA-213ENST00000473598 CBLP22681 906 aa13.63□□□□□ -0.23
LMNA-213ENST00000473598 IGFBP5P24593 272 aa13.63□□□□□ -0.23
LMNA-213ENST00000473598 KCNJ5P48544 419 aa13.63□□□□□ -0.23
LMNA-213ENST00000473598 DAPP51397 102 aa13.63□□□□□ -0.23
LMNA-213ENST00000473598 LSM3P62310 102 aaKnown RBP13.63□□□□□ -0.23
LMNA-213ENST00000473598 RIPPLY1Q0D2K3 151 aa13.63□□□□□ -0.23
LMNA-213ENST00000473598 LAPTM4AQ15012 233 aa13.63□□□□□ -0.23
LMNA-213ENST00000473598 NCF4Q15080 339 aa13.63□□□□□ -0.23
LMNA-213ENST00000473598 TMEM164Q5U3C3 297 aa13.63□□□□□ -0.23
LMNA-213ENST00000473598 KDM4DQ6B0I6 523 aa13.63□□□□□ -0.23
LMNA-213ENST00000473598 TYW3Q6IPR3 259 aaKnown RBP13.63□□□□□ -0.23
LMNA-213ENST00000473598 TMEM205Q6UW68 189 aa13.63□□□□□ -0.23
LMNA-213ENST00000473598 ARSKQ6UWY0 536 aa13.63□□□□□ -0.23
LMNA-213ENST00000473598 NPSR1Q6W5P4 371 aa13.63□□□□□ -0.23
LMNA-213ENST00000473598 FRRS1Q6ZNA5 592 aa13.63□□□□□ -0.23
LMNA-213ENST00000473598 PLEKHM3Q6ZWE6 761 aa13.63□□□□□ -0.23
LMNA-213ENST00000473598 OR1N1Q8NGS0 311 aa13.63□□□□□ -0.23
LMNA-213ENST00000473598 DEDD2Q8WXF8 326 aa13.63□□□□□ -0.23
LMNA-213ENST00000473598 SLC46A1Q96NT5 459 aa13.63□□□□□ -0.23
LMNA-213ENST00000473598 OPALINQ96PE5 141 aa13.63□□□□□ -0.23
LMNA-213ENST00000473598 ITPAQ9BY32 194 aa13.63□□□□□ -0.23
LMNA-213ENST00000473598 ZNF350Q9GZX5 532 aa13.63□□□□□ -0.23
LMNA-213ENST00000473598 SAMHD1Q9Y3Z3 626 aaKnown RBP13.63□□□□□ -0.23
LMNA-213ENST00000473598 ZNF175Q9Y473 711 aa13.63□□□□□ -0.23
LMNA-213ENST00000473598 WDR45Q9Y484 360 aa13.63□□□□□ -0.23
LMNA-213ENST00000473598 GXYLT2A0PJZ3 443 aa13.63□□□□□ -0.23
LMNA-213ENST00000473598 BRINP1O60477 761 aa13.63□□□□□ -0.23
LMNA-213ENST00000473598 STX11O75558 287 aa13.63□□□□□ -0.23
LMNA-213ENST00000473598 CT45A8P0DMV1 189 aa13.63□□□□□ -0.23
LMNA-213ENST00000473598 CT45A9P0DMV2 189 aa13.63□□□□□ -0.23
LMNA-213ENST00000473598 BLVRAP53004 296 aa13.63□□□□□ -0.23
LMNA-213ENST00000473598 ISL1P61371 349 aa13.63□□□□□ -0.23
LMNA-213ENST00000473598 IL18R1Q13478 541 aa13.63□□□□□ -0.23
LMNA-213ENST00000473598 CT45A2Q5DJT8 189 aa13.63□□□□□ -0.23
LMNA-213ENST00000473598 ZNF691Q5VV52 312 aa13.63□□□□□ -0.23
LMNA-213ENST00000473598 TMEM65Q6PI78 240 aa13.63□□□□□ -0.23
LMNA-213ENST00000473598 C6orf15Q6UXA7 325 aaPredicted RBP13.63□□□□□ -0.23
LMNA-213ENST00000473598 TSEN54Q7Z6J9 526 aaKnown RBP13.63□□□□□ -0.23
LMNA-213ENST00000473598 AMER2Q8N7J2 671 aa13.63□□□□□ -0.23
LMNA-213ENST00000473598 GPR32P1Q8NGA4 272 aa13.63□□□□□ -0.23
LMNA-213ENST00000473598 SPPL2AQ8TCT8 520 aa13.63□□□□□ -0.23
LMNA-213ENST00000473598 GEMIN6Q8WXD5 167 aaKnown RBP13.63□□□□□ -0.23
LMNA-213ENST00000473598 NUDT9Q9BW91 350 aa13.63□□□□□ -0.23
LMNA-213ENST00000473598 SAP130Q9H0E3 1048 aa13.63□□□□□ -0.23
LMNA-213ENST00000473598 QRSL1Q9H0R6 528 aaKnown RBP13.63□□□□□ -0.23
LMNA-213ENST00000473598 DCSTAMPQ9H295 470 aa13.63□□□□□ -0.23
LMNA-213ENST00000473598 PPA2Q9H2U2 334 aa13.63□□□□□ -0.23
LMNA-213ENST00000473598 REEP1Q9H902 201 aa13.63□□□□□ -0.23
LMNA-213ENST00000473598 MTHFD2LQ9H903 347 aaPredicted RBP13.63□□□□□ -0.23
LMNA-213ENST00000473598 COPS7AQ9UBW8 275 aa13.63□□□□□ -0.23
LMNA-213ENST00000473598 PADI1Q9ULC6 663 aa13.63□□□□□ -0.23
LMNA-213ENST00000473598 TRAPPC4Q9Y296 219 aa13.63□□□□□ -0.23
LMNA-213ENST00000473598 PEX16Q9Y5Y5 336 aa13.63□□□□□ -0.23
LMNA-213ENST00000473598 DMXL2Q8TDJ6 3036 aa13.62□□□□□ -0.23
LMNA-213ENST00000473598 IGHV3-20A0A0C4DH32 117 aa13.62□□□□□ -0.23
LMNA-213ENST00000473598 MEIOCA2RUB1 952 aa13.62□□□□□ -0.23
LMNA-213ENST00000473598 EFCAB9A8MZ26 197 aa13.62□□□□□ -0.23
LMNA-213ENST00000473598 MITFO75030 526 aaPredicted RBP13.62□□□□□ -0.23
LMNA-213ENST00000473598 KLF7O75840 302 aaPredicted RBP13.62□□□□□ -0.23
LMNA-213ENST00000473598 SCO1O75880 301 aa13.62□□□□□ -0.23
LMNA-213ENST00000473598 HMGN1P05114 100 aa13.62□□□□□ -0.23
LMNA-213ENST00000473598 ALPPP05187 535 aa13.62□□□□□ -0.23
LMNA-213ENST00000473598 CCNYL3P0C7X3 344 aa13.62□□□□□ -0.23
LMNA-213ENST00000473598 TNFRSF1BP20333 461 aa13.62□□□□□ -0.23
LMNA-213ENST00000473598 TRHRP34981 398 aaPredicted RBP13.62□□□□□ -0.23
LMNA-213ENST00000473598 SLC15A1P46059 708 aa13.62□□□□□ -0.23
LMNA-213ENST00000473598 OR1E2P47887 323 aa13.62□□□□□ -0.23
LMNA-213ENST00000473598 GPR143P51810 404 aa13.62□□□□□ -0.23
LMNA-213ENST00000473598 CYP27C1Q4G0S4 372 aa13.62□□□□□ -0.23
LMNA-213ENST00000473598 FIGNL1Q6PIW4 674 aa13.62□□□□□ -0.23
LMNA-213ENST00000473598 TIPARPQ7Z3E1 657 aaKnown RBP13.62□□□□□ -0.23
LMNA-213ENST00000473598 OR4M1Q8NGD0 313 aa13.62□□□□□ -0.23
LMNA-213ENST00000473598 ZG16BQ96DA0 208 aa13.62□□□□□ -0.23
LMNA-213ENST00000473598 MESP1Q9BRJ9 268 aa13.62□□□□□ -0.23
LMNA-213ENST00000473598 UCK2Q9BZX2 261 aa13.62□□□□□ -0.23
LMNA-213ENST00000473598 Q9N2J8 555 aa13.62□□□□□ -0.23
LMNA-213ENST00000473598 POLE3Q9NRF9 147 aa13.62□□□□□ -0.23
LMNA-213ENST00000473598 FBXO34Q9NWN3 711 aa13.62□□□□□ -0.23
LMNA-213ENST00000473598 MRPL39Q9NYK5 338 aaKnown RBP13.62□□□□□ -0.23
LMNA-213ENST00000473598 PDP1Q9P0J1 537 aaPredicted RBP13.62□□□□□ -0.23
LMNA-213ENST00000473598 FOXJ2Q9P0K8 574 aa13.62□□□□□ -0.23
LMNA-213ENST00000473598 C19orf25Q9UFG5 118 aaPredicted RBP13.62□□□□□ -0.23
LMNA-213ENST00000473598 KLHL21Q9UJP4 597 aa13.62□□□□□ -0.23
LMNA-213ENST00000473598 GPR55Q9Y2T6 319 aaPredicted RBP13.62□□□□□ -0.23
LMNA-213ENST00000473598 PRAMEF25A6NGN4 478 aa13.61□□□□□ -0.23
LMNA-213ENST00000473598 TRIM3O75382 744 aaPredicted RBP13.61□□□□□ -0.23
LMNA-213ENST00000473598 CD63P08962 238 aa13.61□□□□□ -0.23
LMNA-213ENST00000473598 RYKP34925 604 aa13.61□□□□□ -0.23
LMNA-213ENST00000473598 PPICP45877 212 aa13.61□□□□□ -0.23
LMNA-213ENST00000473598 GZMKP49863 264 aa13.61□□□□□ -0.23
LMNA-213ENST00000473598 CD47Q08722 323 aa13.61□□□□□ -0.23
LMNA-213ENST00000473598 RIN1Q13671 783 aa13.61□□□□□ -0.23
LMNA-213ENST00000473598 EFR3AQ14156 821 aa13.61□□□□□ -0.23
LMNA-213ENST00000473598 GALEQ14376 348 aa13.61□□□□□ -0.23
LMNA-213ENST00000473598 MEP1AQ16819 746 aa13.61□□□□□ -0.23
LMNA-213ENST00000473598 CTU2Q2VPK5 515 aaKnown RBP13.61□□□□□ -0.23
LMNA-213ENST00000473598 CPEB2Q7Z5Q1 589 aaKnown RBP13.61□□□□□ -0.23
LMNA-213ENST00000473598 HMGN2P46Q86SG4 172 aa13.61□□□□□ -0.23
LMNA-213ENST00000473598 ZNF619Q8N2I2 560 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms