RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 FOXN4Q96NZ1 517 aa8.16□□□□□ -1.1
VCL-204ENST00000472585 TSSK3Q96PN8 268 aa8.16□□□□□ -1.1
VCL-204ENST00000472585 BHLHE41Q9C0J9 482 aaPredicted RBP8.16□□□□□ -1.1
VCL-204ENST00000472585 PIGUQ9H490 435 aa8.16□□□□□ -1.1
VCL-204ENST00000472585 GPATCH2Q9NW75 528 aa8.16□□□□□ -1.1
VCL-204ENST00000472585 SH3BP4Q9P0V3 963 aa8.16□□□□□ -1.1
VCL-204ENST00000472585 KLHL9Q9P2J3 617 aa8.16□□□□□ -1.1
VCL-204ENST00000472585 TMEFF2Q9UIK5 374 aaPredicted RBP8.16□□□□□ -1.1
VCL-204ENST00000472585 NFU1Q9UMS0 254 aa8.16□□□□□ -1.1
VCL-204ENST00000472585 GPC6Q9Y625 555 aaPredicted RBP8.16□□□□□ -1.1
VCL-204ENST00000472585 FKBP7Q9Y680 259 aa8.16□□□□□ -1.1
VCL-204ENST00000472585 IGKV3D-15A0A087WSY6 115 aa8.15□□□□□ -1.1
VCL-204ENST00000472585 A0A1W2PPM1 405 aa8.15□□□□□ -1.1
VCL-204ENST00000472585 SERINC4A6NH21 518 aa8.15□□□□□ -1.1
VCL-204ENST00000472585 M0R1B8 84 aa8.15□□□□□ -1.1
VCL-204ENST00000472585 VENTXO95231 258 aa8.15□□□□□ -1.1
VCL-204ENST00000472585 NUDT14O95848 222 aa8.15□□□□□ -1.1
VCL-204ENST00000472585 HPGDP15428 266 aa8.15□□□□□ -1.1
VCL-204ENST00000472585 PTAFRP25105 342 aa8.15□□□□□ -1.1
VCL-204ENST00000472585 SERPINB4P48594 390 aa8.15□□□□□ -1.1
VCL-204ENST00000472585 DIO1P49895 249 aa8.15□□□□□ -1.1
VCL-204ENST00000472585 LASP1Q14847 261 aaKnown RBP8.15□□□□□ -1.1
VCL-204ENST00000472585 IMPG1Q17R60 797 aa8.15□□□□□ -1.1
VCL-204ENST00000472585 TIGD2Q4W5G0 525 aa8.15□□□□□ -1.1
VCL-204ENST00000472585 CDC73Q6P1J9 531 aa8.15□□□□□ -1.1
VCL-204ENST00000472585 ZCCHC12Q6PEW1 402 aa8.15□□□□□ -1.1
VCL-204ENST00000472585 TMEM108Q6UXF1 575 aa8.15□□□□□ -1.1
VCL-204ENST00000472585 TMPPEQ6ZT21 453 aa8.15□□□□□ -1.1
VCL-204ENST00000472585 FRMD7Q6ZUT3 714 aa8.15□□□□□ -1.1
VCL-204ENST00000472585 SZRD1Q7Z422 152 aa8.15□□□□□ -1.1
VCL-204ENST00000472585 MTERF4Q7Z6M4 381 aaKnown RBP8.15□□□□□ -1.1
VCL-204ENST00000472585 SLC22A9Q8IVM8 553 aa8.15□□□□□ -1.1
VCL-204ENST00000472585 CCDC103Q8IW40 242 aa8.15□□□□□ -1.1
VCL-204ENST00000472585 ZNF100Q8IYN0 542 aa8.15□□□□□ -1.1
VCL-204ENST00000472585 OR7A2PQ8NGA2 310 aa8.15□□□□□ -1.1
VCL-204ENST00000472585 OR52E4Q8NGH9 312 aa8.15□□□□□ -1.1
VCL-204ENST00000472585 RFWD2Q8NHY2 731 aa8.15□□□□□ -1.1
VCL-204ENST00000472585 PPCDCQ96CD2 204 aa8.15□□□□□ -1.1
VCL-204ENST00000472585 ARL5BQ96KC2 179 aa8.15□□□□□ -1.1
VCL-204ENST00000472585 SORCS2Q96PQ0 1159 aa8.15□□□□□ -1.1
VCL-204ENST00000472585 OR5B2Q96R09 309 aa8.15□□□□□ -1.1
VCL-204ENST00000472585 STACQ99469 402 aa8.15□□□□□ -1.1
VCL-204ENST00000472585 INPP5KQ9BT40 448 aa8.15□□□□□ -1.1
VCL-204ENST00000472585 THUMPD3Q9BV44 507 aaKnown RBP8.15□□□□□ -1.1
VCL-204ENST00000472585 SERHL2Q9H4I8 314 aa8.15□□□□□ -1.1
VCL-204ENST00000472585 DUSP22Q9NRW4 184 aa8.15□□□□□ -1.1
VCL-204ENST00000472585 ACSS1Q9NUB1 689 aaPredicted RBP8.15□□□□□ -1.1
VCL-204ENST00000472585 GIMAP2Q9UG22 337 aa8.15□□□□□ -1.1
VCL-204ENST00000472585 ARFGEF3Q5TH69 2177 aa8.15□□□□□ -1.11
VCL-204ENST00000472585 GJE1A6NN92 205 aa8.14□□□□□ -1.11
VCL-204ENST00000472585 KIF2AO00139 706 aaPredicted RBP8.14□□□□□ -1.11
VCL-204ENST00000472585 FCMRO60667 390 aa8.14□□□□□ -1.11
VCL-204ENST00000472585 SLU7O95391 586 aaKnown RBP8.14□□□□□ -1.11
VCL-204ENST00000472585 DHRS4L1P0CG22 281 aa8.14□□□□□ -1.11
VCL-204ENST00000472585 LAMP1P11279 417 aa8.14□□□□□ -1.11
VCL-204ENST00000472585 ZNF23P17027 643 aa8.14□□□□□ -1.11
VCL-204ENST00000472585 CASQ1P31415 396 aa8.14□□□□□ -1.11
VCL-204ENST00000472585 IL2RGP31785 369 aa8.14□□□□□ -1.11
VCL-204ENST00000472585 APOBEC3AP31941 199 aaPredicted RBP8.14□□□□□ -1.11
VCL-204ENST00000472585 ATP12AP54707 1039 aa8.14□□□□□ -1.11
VCL-204ENST00000472585 SESN3P58005 492 aa8.14□□□□□ -1.11
VCL-204ENST00000472585 PLAURQ03405 335 aa8.14□□□□□ -1.11
VCL-204ENST00000472585 SELENBP1Q13228 472 aa8.14□□□□□ -1.11
VCL-204ENST00000472585 SCGB2A2Q13296 93 aa8.14□□□□□ -1.11
VCL-204ENST00000472585 SKP2Q13309 424 aa8.14□□□□□ -1.11
VCL-204ENST00000472585 MAPK14Q16539 360 aa8.14□□□□□ -1.11
VCL-204ENST00000472585 DCST2Q5T1A1 773 aa8.14□□□□□ -1.11
VCL-204ENST00000472585 C9orf135Q5VTT2 229 aa8.14□□□□□ -1.11
VCL-204ENST00000472585 ABLIM2Q6H8Q1 611 aa8.14□□□□□ -1.11
VCL-204ENST00000472585 ZNF544Q6NX49 715 aa8.14□□□□□ -1.11
VCL-204ENST00000472585 KLHL17Q6TDP4 642 aa8.14□□□□□ -1.11
VCL-204ENST00000472585 ZYG11AQ6WRX3 759 aa8.14□□□□□ -1.11
VCL-204ENST00000472585 SYT10Q6XYQ8 523 aa8.14□□□□□ -1.11
VCL-204ENST00000472585 MTDHQ86UE4 582 aaKnown RBP8.14□□□□□ -1.11
VCL-204ENST00000472585 ANKS4BQ8N8V4 417 aa8.14□□□□□ -1.11
VCL-204ENST00000472585 NOA1Q8NC60 698 aaKnown RBP8.14□□□□□ -1.11
VCL-204ENST00000472585 ZNF540Q8NDQ6 660 aa8.14□□□□□ -1.11
VCL-204ENST00000472585 OR5W2Q8NH69 310 aa8.14□□□□□ -1.11
VCL-204ENST00000472585 IFT81Q8WYA0 676 aa8.14□□□□□ -1.11
VCL-204ENST00000472585 JADE3Q92613 823 aa8.14□□□□□ -1.11
VCL-204ENST00000472585 SDF2Q99470 211 aa8.14□□□□□ -1.11
VCL-204ENST00000472585 CCT7Q99832 543 aa8.14□□□□□ -1.11
VCL-204ENST00000472585 TRMOQ9BU70 441 aa8.14□□□□□ -1.11
VCL-204ENST00000472585 GRPEL1Q9HAV7 217 aa8.14□□□□□ -1.11
VCL-204ENST00000472585 RRAGDQ9NQL2 400 aaPredicted RBP8.14□□□□□ -1.11
VCL-204ENST00000472585 C1orf109Q9NX04 203 aa8.14□□□□□ -1.11
VCL-204ENST00000472585 STK38LQ9Y2H1 464 aa8.14□□□□□ -1.11
VCL-204ENST00000472585 DTNAQ9Y4J8 743 aa8.14□□□□□ -1.11
VCL-204ENST00000472585 TRAF6Q9Y4K3 522 aa8.14□□□□□ -1.11
VCL-204ENST00000472585 ATP23Q9Y6H3 246 aa8.14□□□□□ -1.11
VCL-204ENST00000472585 A0A087WUV0 522 aaPredicted RBP8.13□□□□□ -1.11
VCL-204ENST00000472585 LOC390937A0A1W2PQ73 354 aa8.13□□□□□ -1.11
VCL-204ENST00000472585 TMEM89A2RUT3 159 aa8.13□□□□□ -1.11
VCL-204ENST00000472585 LRP5LA4QPB2 252 aa8.13□□□□□ -1.11
VCL-204ENST00000472585 CCDC151A5D8V7 595 aa8.13□□□□□ -1.11
VCL-204ENST00000472585 CCT8L1PA6NM43 557 aa8.13□□□□□ -1.11
VCL-204ENST00000472585 FAM157AC9JC47 383 aa8.13□□□□□ -1.11
VCL-204ENST00000472585 ATP6V1G2-DDX39BF2Z307 99 aa8.13□□□□□ -1.11
VCL-204ENST00000472585 GTPBP1O00178 669 aaKnown RBP8.13□□□□□ -1.11
VCL-204ENST00000472585 LSM1O15116 133 aaKnown RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms