RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 MSX2P35548 267 aaPredicted RBP8.17□□□□□ -1.1
SF3A1-206ENST00000471037 CRISP3P54108 245 aa8.17□□□□□ -1.1
SF3A1-206ENST00000471037 CLDN18P56856 261 aa8.17□□□□□ -1.1
SF3A1-206ENST00000471037 CORO7P57737 925 aa8.17□□□□□ -1.1
SF3A1-206ENST00000471037 POU6F2P78424 691 aaPredicted RBP8.17□□□□□ -1.1
SF3A1-206ENST00000471037 HPCAP84074 193 aa8.17□□□□□ -1.1
SF3A1-206ENST00000471037 PSG6Q00889 435 aa8.17□□□□□ -1.1
SF3A1-206ENST00000471037 SRYQ05066 204 aa8.17□□□□□ -1.1
SF3A1-206ENST00000471037 FLOT2Q14254 428 aa8.17□□□□□ -1.1
SF3A1-206ENST00000471037 NNATQ16517 81 aa8.17□□□□□ -1.1
SF3A1-206ENST00000471037 ARHGAP11BQ3KRB8 267 aa8.17□□□□□ -1.1
SF3A1-206ENST00000471037 CYP27C1Q4G0S4 372 aa8.17□□□□□ -1.1
SF3A1-206ENST00000471037 CT45A2Q5DJT8 189 aa8.17□□□□□ -1.1
SF3A1-206ENST00000471037 MTX3Q5HYI7 312 aa8.17□□□□□ -1.1
SF3A1-206ENST00000471037 LCN8Q6JVE9 175 aa8.17□□□□□ -1.1
SF3A1-206ENST00000471037 REEP3Q6NUK4 255 aa8.17□□□□□ -1.1
SF3A1-206ENST00000471037 AAGABQ6PD74 315 aa8.17□□□□□ -1.1
SF3A1-206ENST00000471037 CCDC80Q76M96 950 aa8.17□□□□□ -1.1
SF3A1-206ENST00000471037 PATL1Q86TB9 770 aaKnown RBP8.17□□□□□ -1.1
SF3A1-206ENST00000471037 DHFR2Q86XF0 187 aa8.17□□□□□ -1.1
SF3A1-206ENST00000471037 PLCZ1Q86YW0 608 aa8.17□□□□□ -1.1
SF3A1-206ENST00000471037 CIARTQ8N365 385 aaPredicted RBP8.17□□□□□ -1.1
SF3A1-206ENST00000471037 OR52E4Q8NGH9 312 aa8.17□□□□□ -1.1
SF3A1-206ENST00000471037 NFKBIDQ8NI38 313 aa8.17□□□□□ -1.1
SF3A1-206ENST00000471037 BBS10Q8TAM1 723 aa8.17□□□□□ -1.1
SF3A1-206ENST00000471037 FBXO30Q8TB52 745 aa8.17□□□□□ -1.1
SF3A1-206ENST00000471037 GPR151Q8TDV0 419 aa8.17□□□□□ -1.1
SF3A1-206ENST00000471037 SLC38A5Q8WUX1 472 aa8.17□□□□□ -1.1
SF3A1-206ENST00000471037 CDS1Q92903 461 aa8.17□□□□□ -1.1
SF3A1-206ENST00000471037 MAL2Q969L2 176 aa8.17□□□□□ -1.1
SF3A1-206ENST00000471037 SLC35A4Q96G79 324 aa8.17□□□□□ -1.1
SF3A1-206ENST00000471037 TMEM19Q96HH6 336 aa8.17□□□□□ -1.1
SF3A1-206ENST00000471037 LRGUKQ96M69 825 aa8.17□□□□□ -1.1
SF3A1-206ENST00000471037 NSMCE2Q96MF7 247 aa8.17□□□□□ -1.1
SF3A1-206ENST00000471037 TRNT1Q96Q11 434 aaKnown RBP8.17□□□□□ -1.1
SF3A1-206ENST00000471037 BDH2Q9BUT1 245 aa8.17□□□□□ -1.1
SF3A1-206ENST00000471037 PCDHAC1Q9H158 963 aa8.17□□□□□ -1.1
SF3A1-206ENST00000471037 GORASP2Q9H8Y8 452 aa8.17□□□□□ -1.1
SF3A1-206ENST00000471037 BCL2L10Q9HD36 194 aa8.17□□□□□ -1.1
SF3A1-206ENST00000471037 POLE3Q9NRF9 147 aa8.17□□□□□ -1.1
SF3A1-206ENST00000471037 TAS2R10Q9NYW0 307 aa8.17□□□□□ -1.1
SF3A1-206ENST00000471037 GMPR2Q9P2T1 348 aaKnown RBP8.17□□□□□ -1.1
SF3A1-206ENST00000471037 EGFL7Q9UHF1 273 aa8.17□□□□□ -1.1
SF3A1-206ENST00000471037 MRTO4Q9UKD2 239 aaKnown RBP8.17□□□□□ -1.1
SF3A1-206ENST00000471037 USP22Q9UPT9 525 aa8.17□□□□□ -1.1
SF3A1-206ENST00000471037 MRPS18CQ9Y3D5 142 aaKnown RBP8.17□□□□□ -1.1
SF3A1-206ENST00000471037 C2orf72A6NCS6 295 aa8.16□□□□□ -1.1
SF3A1-206ENST00000471037 OR6C70A6NIJ9 312 aa8.16□□□□□ -1.1
SF3A1-206ENST00000471037 AQP12BA6NM10 295 aa8.16□□□□□ -1.1
SF3A1-206ENST00000471037 KIAA1324LA8MWY0 1029 aaPredicted RBP8.16□□□□□ -1.1
SF3A1-206ENST00000471037 H0YHG0 523 aa8.16□□□□□ -1.1
SF3A1-206ENST00000471037 H7C1Q1 480 aa8.16□□□□□ -1.1
SF3A1-206ENST00000471037 NME6O75414 186 aaPredicted RBP8.16□□□□□ -1.1
SF3A1-206ENST00000471037 STX11O75558 287 aa8.16□□□□□ -1.1
SF3A1-206ENST00000471037 PGM3O95394 542 aa8.16□□□□□ -1.1
SF3A1-206ENST00000471037 TGM6O95932 706 aa8.16□□□□□ -1.1
SF3A1-206ENST00000471037 IFNA14P01570 189 aa8.16□□□□□ -1.1
SF3A1-206ENST00000471037 CRYGSP22914 178 aa8.16□□□□□ -1.1
SF3A1-206ENST00000471037 CCKARP32238 428 aa8.16□□□□□ -1.1
SF3A1-206ENST00000471037 CD79BP40259 229 aa8.16□□□□□ -1.1
SF3A1-206ENST00000471037 STARP49675 285 aa8.16□□□□□ -1.1
SF3A1-206ENST00000471037 PCBP3P57721 371 aaKnown RBP8.16□□□□□ -1.1
SF3A1-206ENST00000471037 MRPS22P82650 360 aaKnown RBP8.16□□□□□ -1.1
SF3A1-206ENST00000471037 MS4A2Q01362 244 aa8.16□□□□□ -1.1
SF3A1-206ENST00000471037 FUT5Q11128 374 aa8.16□□□□□ -1.1
SF3A1-206ENST00000471037 BCL2A1Q16548 175 aa8.16□□□□□ -1.1
SF3A1-206ENST00000471037 SYPL1Q16563 259 aa8.16□□□□□ -1.1
SF3A1-206ENST00000471037 ACKR1Q16570 336 aa8.16□□□□□ -1.1
SF3A1-206ENST00000471037 GPAT3Q53EU6 434 aa8.16□□□□□ -1.1
SF3A1-206ENST00000471037 DCST2Q5T1A1 773 aa8.16□□□□□ -1.1
SF3A1-206ENST00000471037 GLYATQ6IB77 296 aa8.16□□□□□ -1.1
SF3A1-206ENST00000471037 OR2A2Q6IF42 318 aa8.16□□□□□ -1.1
SF3A1-206ENST00000471037 PLXDC2Q6UX71 529 aa8.16□□□□□ -1.1
SF3A1-206ENST00000471037 NPSR1Q6W5P4 371 aa8.16□□□□□ -1.1
SF3A1-206ENST00000471037 C20orf204Q6ZNR8 217 aa8.16□□□□□ -1.1
SF3A1-206ENST00000471037 LRRC74BQ6ZQY2 392 aa8.16□□□□□ -1.1
SF3A1-206ENST00000471037 KRT73Q86Y46 540 aa8.16□□□□□ -1.1
SF3A1-206ENST00000471037 GRAMD2AQ8IUY3 354 aa8.16□□□□□ -1.1
SF3A1-206ENST00000471037 SLC44A2Q8IWA5 706 aaPredicted RBP8.16□□□□□ -1.1
SF3A1-206ENST00000471037 AQP12AQ8IXF9 295 aa8.16□□□□□ -1.1
SF3A1-206ENST00000471037 C10orf67Q8IYJ2 551 aa8.16□□□□□ -1.1
SF3A1-206ENST00000471037 ANKFN1Q8N957 763 aa8.16□□□□□ -1.1
SF3A1-206ENST00000471037 RNF138Q8WVD3 245 aa8.16□□□□□ -1.1
SF3A1-206ENST00000471037 FIG4Q92562 907 aa8.16□□□□□ -1.1
SF3A1-206ENST00000471037 PIK3R3Q92569 461 aa8.16□□□□□ -1.1
SF3A1-206ENST00000471037 PMM1Q92871 262 aa8.16□□□□□ -1.1
SF3A1-206ENST00000471037 FAM162AQ96A26 154 aa8.16□□□□□ -1.1
SF3A1-206ENST00000471037 TMCO6Q96DC7 493 aa8.16□□□□□ -1.1
SF3A1-206ENST00000471037 STARD4Q96DR4 205 aa8.16□□□□□ -1.1
SF3A1-206ENST00000471037 OTUB1Q96FW1 271 aaPredicted RBP8.16□□□□□ -1.1
SF3A1-206ENST00000471037 Q96MF0 132 aa8.16□□□□□ -1.1
SF3A1-206ENST00000471037 RNF145Q96MT1 663 aa8.16□□□□□ -1.1
SF3A1-206ENST00000471037 SFXN2Q96NB2 322 aa8.16□□□□□ -1.1
SF3A1-206ENST00000471037 WFIKKN1Q96NZ8 548 aa8.16□□□□□ -1.1
SF3A1-206ENST00000471037 ZNF607Q96SK3 696 aa8.16□□□□□ -1.1
SF3A1-206ENST00000471037 SDF2Q99470 211 aa8.16□□□□□ -1.1
SF3A1-206ENST00000471037 MDFIQ99750 246 aa8.16□□□□□ -1.1
SF3A1-206ENST00000471037 ZNF350Q9GZX5 532 aa8.16□□□□□ -1.1
SF3A1-206ENST00000471037 ZNF226Q9NYT6 803 aa8.16□□□□□ -1.1
SF3A1-206ENST00000471037 C6orf203Q9P0P8 240 aaPredicted RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms