RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 NTRK2Q16620 822 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 NRF1Q16656 503 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 DECR1Q16698 335 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 GFOD2Q3B7J2 385 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 FLYWCH1Q4VC44 716 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 PDZK1Q5T2W1 519 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 PRAMEF8Q5VWM4 474 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 PRAMEF7Q5VXH5 474 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 JMJD6Q6NYC1 403 aaPredicted RBP4.31□□□□□ -1.72
SF3B1-208ENST00000470268 ENPP6Q6UWR7 440 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 IL20RBQ6UXL0 311 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 LINC00696Q6ZRV3 163 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 MDGA2Q7Z553 956 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 TSEN54Q7Z6J9 526 aaKnown RBP4.31□□□□□ -1.72
SF3B1-208ENST00000470268 LACC1Q8IV20 430 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 APLFQ8IW19 511 aaPredicted RBP4.31□□□□□ -1.72
SF3B1-208ENST00000470268 SLC34A3Q8N130 599 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 ZNF619Q8N2I2 560 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 PQLC1Q8N2U9 271 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 CLIP4Q8N3C7 705 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 SLC5A8Q8N695 610 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 METTL25Q8N6Q8 603 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 OR10G3Q8NGC4 313 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 OR4D11Q8NGI4 311 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 BBS10Q8TAM1 723 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 GRHL3Q8TE85 626 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 RNF138Q8WVD3 245 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 APOBEC4Q8WW27 367 aaKnown RBP4.31□□□□□ -1.72
SF3B1-208ENST00000470268 ZCCHC14Q8WYQ9 949 aaKnown RBP4.31□□□□□ -1.72
SF3B1-208ENST00000470268 HGDQ93099 445 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 SPACA9Q96E40 222 aaPredicted RBP4.31□□□□□ -1.72
SF3B1-208ENST00000470268 RSRC1Q96IZ7 334 aaKnown RBP4.31□□□□□ -1.72
SF3B1-208ENST00000470268 VPS50Q96JG6 964 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 ZNF184Q99676 751 aaPredicted RBP4.31□□□□□ -1.72
SF3B1-208ENST00000470268 SLC29A1Q99808 456 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 MTHFD2LQ9H903 347 aaPredicted RBP4.31□□□□□ -1.72
SF3B1-208ENST00000470268 PROK2Q9HC23 129 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 GALNT9Q9HCQ5 603 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 SH2D2AQ9NP31 389 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 DCAF13Q9NV06 445 aaKnown RBP4.31□□□□□ -1.72
SF3B1-208ENST00000470268 ETAA1Q9NY74 926 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 GPR83Q9NYM4 423 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 STMN3Q9NZ72 180 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 Q9UFV3 132 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 MAGEL2Q9UJ55 1249 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 TUBD1Q9UJT1 453 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 AURKCQ9UQB9 309 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 ANGPT4Q9Y264 503 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 YARS2Q9Y2Z4 477 aaKnown RBP4.31□□□□□ -1.72
SF3B1-208ENST00000470268 CSAG2Q9Y5P2 127 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 CHCHD2Q9Y6H1 151 aaPredicted RBP4.31□□□□□ -1.72
SF3B1-208ENST00000470268 APC2O95996 2303 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 TCRBV3S1A0A5B6 114 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 OR6C70A6NIJ9 312 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 PDLIM1O00151 329 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 FRS3O43559 492 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 FADS1O60427 444 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 TPST2O60704 377 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 CEACAM4O75871 244 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 NEURL1O76050 574 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 UTS2O95399 124 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 WDPCPO95876 746 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 GUSBP08236 651 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 PABPC4LP0CB38 370 aaKnown RBP4.31□□□□□ -1.72
SF3B1-208ENST00000470268 CCL3P10147 92 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 ATP6V1C1P21283 382 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 IL12BP29460 328 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 OR1E2P47887 323 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 KCNJ5P48544 419 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 ATP12AP54707 1039 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 GAS1P54826 345 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 RRADP55042 308 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 POLE2P56282 527 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 NRG3P56975 720 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 SELENOWP63302 87 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 EEF1A1P68104 462 aaKnown RBP4.31□□□□□ -1.72
SF3B1-208ENST00000470268 PPP1R8Q12972 351 aaKnown RBP4.31□□□□□ -1.72
SF3B1-208ENST00000470268 ZNF141Q15928 474 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 MEP1AQ16819 746 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 NDUFAF6Q330K2 333 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 IQCCQ4KMZ1 466 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 KLHL26Q53HC5 615 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 CYBRD1Q53TN4 286 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 INTS11Q5TA45 600 aaKnown RBP4.31□□□□□ -1.72
SF3B1-208ENST00000470268 FNDC7Q5VTL7 733 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 SPINK14Q6IE38 97 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 AAGABQ6PD74 315 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 EIF3MQ7L2H7 374 aaKnown RBP4.31□□□□□ -1.72
SF3B1-208ENST00000470268 RBM45Q8IUH3 476 aaKnown RBP4.31□□□□□ -1.72
SF3B1-208ENST00000470268 GLB1L2Q8IW92 636 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 TAGAPQ8N103 731 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 BCL6BQ8N143 479 aaPredicted RBP4.31□□□□□ -1.72
SF3B1-208ENST00000470268 GATSQ8NAP1 163 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 POGLUT1Q8NBL1 392 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 TNIP2Q8NFZ5 429 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 OR52E4Q8NGH9 312 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 OR52P1PQ8NH57 321 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 SLC22A8Q8TCC7 542 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 FAM162AQ96A26 154 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 ZNF524Q96C55 264 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms