RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 C3orf56Q8N813 242 aa4.84□□□□□ -1.63
PTCD3-207ENST00000467273 FAM83FQ8NEG4 500 aaPredicted RBP4.84□□□□□ -1.63
PTCD3-207ENST00000467273 KIF18AQ8NI77 898 aa4.84□□□□□ -1.63
PTCD3-207ENST00000467273 SMAP2Q8WU79 429 aaPredicted RBP4.84□□□□□ -1.63
PTCD3-207ENST00000467273 ATL1Q8WXF7 558 aa4.84□□□□□ -1.63
PTCD3-207ENST00000467273 FAM162AQ96A26 154 aa4.84□□□□□ -1.63
PTCD3-207ENST00000467273 RHBDF1Q96CC6 855 aa4.84□□□□□ -1.63
PTCD3-207ENST00000467273 PTCD3Q96EY7 689 aaKnown RBP4.84□□□□□ -1.63
PTCD3-207ENST00000467273 PGM2Q96G03 612 aa4.84□□□□□ -1.63
PTCD3-207ENST00000467273 SNF8Q96H20 258 aa4.84□□□□□ -1.63
PTCD3-207ENST00000467273 SENP5Q96HI0 755 aaPredicted RBP4.84□□□□□ -1.63
PTCD3-207ENST00000467273 ATP6V1G3Q96LB4 118 aa4.84□□□□□ -1.63
PTCD3-207ENST00000467273 RILPQ96NA2 401 aa4.84□□□□□ -1.63
PTCD3-207ENST00000467273 NDNQ99608 321 aa4.84□□□□□ -1.63
PTCD3-207ENST00000467273 BCL7BQ9BQE9 202 aa4.84□□□□□ -1.63
PTCD3-207ENST00000467273 AIF1LQ9BQI0 150 aa4.84□□□□□ -1.63
PTCD3-207ENST00000467273 OSBPL8Q9BZF1 889 aa4.84□□□□□ -1.63
PTCD3-207ENST00000467273 IL22Q9GZX6 179 aa4.84□□□□□ -1.63
PTCD3-207ENST00000467273 TOR3AQ9H497 397 aa4.84□□□□□ -1.63
PTCD3-207ENST00000467273 OPA3Q9H6K4 179 aa4.84□□□□□ -1.63
PTCD3-207ENST00000467273 ZNF696Q9H7X3 374 aa4.84□□□□□ -1.63
PTCD3-207ENST00000467273 PELI2Q9HAT8 420 aa4.84□□□□□ -1.63
PTCD3-207ENST00000467273 PARVBQ9HBI1 364 aa4.84□□□□□ -1.63
PTCD3-207ENST00000467273 LYRM4Q9HD34 91 aa4.84□□□□□ -1.63
PTCD3-207ENST00000467273 NGBQ9NPG2 151 aa4.84□□□□□ -1.63
PTCD3-207ENST00000467273 NRIP3Q9NQ35 241 aa4.84□□□□□ -1.63
PTCD3-207ENST00000467273 POLE3Q9NRF9 147 aa4.84□□□□□ -1.63
PTCD3-207ENST00000467273 SNX15Q9NRS6 342 aa4.84□□□□□ -1.63
PTCD3-207ENST00000467273 SLC35D1Q9NTN3 355 aa4.84□□□□□ -1.63
PTCD3-207ENST00000467273 FAIMQ9NVQ4 179 aa4.84□□□□□ -1.63
PTCD3-207ENST00000467273 WWOXQ9NZC7 414 aa4.84□□□□□ -1.63
PTCD3-207ENST00000467273 AMFRQ9UKV5 643 aa4.84□□□□□ -1.63
PTCD3-207ENST00000467273 DAPP1Q9UN19 280 aa4.84□□□□□ -1.63
PTCD3-207ENST00000467273 SH2B3Q9UQQ2 575 aa4.84□□□□□ -1.63
PTCD3-207ENST00000467273 LIPT1Q9Y234 373 aa4.84□□□□□ -1.63
PTCD3-207ENST00000467273 SLC6A5Q9Y345 797 aa4.84□□□□□ -1.63
PTCD3-207ENST00000467273 DHRS7Q9Y394 339 aa4.84□□□□□ -1.63
PTCD3-207ENST00000467273 MRPS18CQ9Y3D5 142 aaKnown RBP4.84□□□□□ -1.63
PTCD3-207ENST00000467273 RNF115Q9Y4L5 304 aa4.84□□□□□ -1.63
PTCD3-207ENST00000467273 MAD1L1Q9Y6D9 718 aa4.84□□□□□ -1.63
PTCD3-207ENST00000467273 NINQ8N4C6 2090 aa4.84□□□□□ -1.64
PTCD3-207ENST00000467273 NBEAL2Q6ZNJ1 2754 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 IGHV4-30-2A0A087WSY4 118 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 A0A1W2PP18 115 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 LRIT2A6NDA9 550 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 FAM90A18PA6NE21 464 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 GOLGA6L9A6NEM1 432 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 FAM90A16PA6NEW6 464 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 FAM90A9PA6NNJ1 464 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 FAM90A5PA8MXJ8 464 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 E7EVH7 732 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 CBR3O75828 277 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 BCAS2O75934 225 aaPredicted RBP4.83□□□□□ -1.64
PTCD3-207ENST00000467273 CGAP01215 116 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 SOD3P08294 240 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 HIST1H2AGP0C0S8 130 aaPredicted RBP4.83□□□□□ -1.64
PTCD3-207ENST00000467273 FAM90A15PP0C7V4 464 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 FAM90A14PP0C7W9 464 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 ZNF708P17019 499 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 ZNF3P17036 446 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 HIST1H2ADP20671 130 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 IGFBP5P24593 272 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 ABCD3P28288 659 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 PTPN6P29350 595 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 CASP3P42574 277 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 RGS4P49798 205 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 LUMP51884 338 aaPredicted RBP4.83□□□□□ -1.64
PTCD3-207ENST00000467273 HNRNPFP52597 415 aaKnown RBP4.83□□□□□ -1.64
PTCD3-207ENST00000467273 LIM2P55344 173 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 EEFSECP57772 596 aaKnown RBP4.83□□□□□ -1.64
PTCD3-207ENST00000467273 BTN3A2P78410 334 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 IGLV3-21P80748 117 aaPredicted RBP4.83□□□□□ -1.64
PTCD3-207ENST00000467273 REEP5Q00765 189 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 SCGB2A2Q13296 93 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 NAE1Q13564 534 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 RUNX2Q13950 521 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 DOC2AQ14183 400 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 ADPRMQ3LIE5 342 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 EIPR1Q53HC9 387 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 TRIM40Q6P9F5 258 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 LRIG3Q6UXM1 1119 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 CHMP1BQ7LBR1 199 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 SSX8Q7RTT4 187 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 MAVSQ7Z434 540 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 P4HA3Q7Z4N8 544 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 CPLX4Q7Z7G2 160 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 IFNEQ86WN2 208 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 TUSC5Q8IXB3 177 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 C9orf40Q8IXQ3 194 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 FAM9CQ8IZT9 166 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 LRRC17Q8N6Y2 441 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 ZNF321PQ8N8H1 164 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 CNEP1R1Q8N9A8 125 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 OR2L5Q8NG80 312 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 OR8K1Q8NGG5 319 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 OR1J4Q8NGS1 313 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 SPPL2AQ8TCT8 520 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 MS4A6EQ96DS6 147 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 RNF125Q96EQ8 232 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 ZC3HAV1LQ96H79 300 aaKnown RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms