RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 DPRXA6NFQ7 191 aa8.58□□□□□ -1.04
USP39-212ENST00000465514 TMEM114B3SHH9 223 aa8.58□□□□□ -1.04
USP39-212ENST00000465514 FAM157AC9JC47 383 aa8.58□□□□□ -1.04
USP39-212ENST00000465514 C9JVG2 144 aa8.58□□□□□ -1.04
USP39-212ENST00000465514 RAMP1O60894 148 aa8.58□□□□□ -1.04
USP39-212ENST00000465514 PEX11AO75192 247 aa8.58□□□□□ -1.04
USP39-212ENST00000465514 TGFAP01135 160 aa8.58□□□□□ -1.04
USP39-212ENST00000465514 FESP07332 822 aa8.58□□□□□ -1.04
USP39-212ENST00000465514 CHRNGP07510 517 aa8.58□□□□□ -1.04
USP39-212ENST00000465514 MAPK1P28482 360 aa8.58□□□□□ -1.04
USP39-212ENST00000465514 SLC7A1P30825 629 aa8.58□□□□□ -1.04
USP39-212ENST00000465514 RPL3P39023 403 aaKnown RBP8.58□□□□□ -1.04
USP39-212ENST00000465514 ATP12AP54707 1039 aa8.58□□□□□ -1.04
USP39-212ENST00000465514 CDH11P55287 796 aa8.58□□□□□ -1.04
USP39-212ENST00000465514 PRSS12P56730 875 aa8.58□□□□□ -1.04
USP39-212ENST00000465514 ITGADQ13349 1161 aa8.58□□□□□ -1.04
USP39-212ENST00000465514 TP53BP2Q13625 1128 aa8.58□□□□□ -1.04
USP39-212ENST00000465514 SPDYE7PQ495Y7 208 aa8.58□□□□□ -1.04
USP39-212ENST00000465514 SEZ6L2Q6UXD5 910 aa8.58□□□□□ -1.04
USP39-212ENST00000465514 BHLHA15Q7RTS1 189 aaPredicted RBP8.58□□□□□ -1.04
USP39-212ENST00000465514 SLC43A2Q8N370 569 aa8.58□□□□□ -1.04
USP39-212ENST00000465514 ZNF614Q8N883 585 aa8.58□□□□□ -1.04
USP39-212ENST00000465514 OR56A1Q8NGH5 318 aa8.58□□□□□ -1.04
USP39-212ENST00000465514 KIF18AQ8NI77 898 aa8.58□□□□□ -1.04
USP39-212ENST00000465514 PSMA8Q8TAA3 256 aa8.58□□□□□ -1.04
USP39-212ENST00000465514 EPS8L3Q8TE67 593 aaKnown RBP8.58□□□□□ -1.04
USP39-212ENST00000465514 UBLCP1Q8WVY7 318 aaPredicted RBP8.58□□□□□ -1.04
USP39-212ENST00000465514 OR5P2Q8WZ92 322 aa8.58□□□□□ -1.04
USP39-212ENST00000465514 C3orf49Q96BT1 292 aa8.58□□□□□ -1.04
USP39-212ENST00000465514 ZNF775Q96BV0 537 aaPredicted RBP8.58□□□□□ -1.04
USP39-212ENST00000465514 MRGPRX4Q96LA9 322 aa8.58□□□□□ -1.04
USP39-212ENST00000465514 PPP3R2Q96LZ3 170 aa8.58□□□□□ -1.04
USP39-212ENST00000465514 USB1Q9BQ65 265 aaKnown RBP8.58□□□□□ -1.04
USP39-212ENST00000465514 POTEKPQ9BYX7 375 aa8.58□□□□□ -1.04
USP39-212ENST00000465514 CXorf36Q9H7Y0 433 aa8.58□□□□□ -1.04
USP39-212ENST00000465514 GPATCH2Q9NW75 528 aa8.58□□□□□ -1.04
USP39-212ENST00000465514 PRSS50Q9UI38 385 aa8.58□□□□□ -1.04
USP39-212ENST00000465514 MID2Q9UJV3 735 aa8.58□□□□□ -1.04
USP39-212ENST00000465514 ING1Q9UK53 422 aaPredicted RBP8.58□□□□□ -1.04
USP39-212ENST00000465514 FAF1Q9UNN5 650 aaPredicted RBP8.58□□□□□ -1.04
USP39-212ENST00000465514 DTNAQ9Y4J8 743 aa8.58□□□□□ -1.04
USP39-212ENST00000465514 NPIPB9F8W1W9 429 aa8.57□□□□□ -1.04
USP39-212ENST00000465514 KIF2AO00139 706 aaPredicted RBP8.57□□□□□ -1.04
USP39-212ENST00000465514 ZNF264O43296 627 aa8.57□□□□□ -1.04
USP39-212ENST00000465514 NPHS1O60500 1241 aa8.57□□□□□ -1.04
USP39-212ENST00000465514 EIF4E2O60573 245 aaKnown RBP8.57□□□□□ -1.04
USP39-212ENST00000465514 LYZL6O75951 148 aa8.57□□□□□ -1.04
USP39-212ENST00000465514 C6orf47O95873 294 aa8.57□□□□□ -1.04
USP39-212ENST00000465514 KRT16P08779 473 aa8.57□□□□□ -1.04
USP39-212ENST00000465514 APEHP13798 732 aaKnown RBP8.57□□□□□ -1.04
USP39-212ENST00000465514 ALDH3A1P30838 453 aa8.57□□□□□ -1.04
USP39-212ENST00000465514 OR3A2P47893 321 aa8.57□□□□□ -1.04
USP39-212ENST00000465514 C21orf58P58505 322 aa8.57□□□□□ -1.04
USP39-212ENST00000465514 RAC3P60763 192 aa8.57□□□□□ -1.04
USP39-212ENST00000465514 RASGEF1BQ0VAM2 473 aa8.57□□□□□ -1.04
USP39-212ENST00000465514 SELENBP1Q13228 472 aa8.57□□□□□ -1.04
USP39-212ENST00000465514 PTGR1Q14914 329 aa8.57□□□□□ -1.04
USP39-212ENST00000465514 PPA1Q15181 289 aa8.57□□□□□ -1.04
USP39-212ENST00000465514 QPRTQ15274 297 aa8.57□□□□□ -1.04
USP39-212ENST00000465514 RAB35Q15286 201 aa8.57□□□□□ -1.04
USP39-212ENST00000465514 STK11Q15831 433 aa8.57□□□□□ -1.04
USP39-212ENST00000465514 LSM12Q3MHD2 195 aaKnown RBP8.57□□□□□ -1.04
USP39-212ENST00000465514 ARL13AQ5H913 290 aaPredicted RBP8.57□□□□□ -1.04
USP39-212ENST00000465514 SLC25A53Q5H9E4 307 aa8.57□□□□□ -1.04
USP39-212ENST00000465514 AGAP6Q5VW22 663 aa8.57□□□□□ -1.04
USP39-212ENST00000465514 C11orf71Q6IPW1 123 aa8.57□□□□□ -1.04
USP39-212ENST00000465514 Q6ZT83 130 aa8.57□□□□□ -1.04
USP39-212ENST00000465514 HOMEZQ8IX15 550 aa8.57□□□□□ -1.04
USP39-212ENST00000465514 KRTCAP2Q8N6L1 136 aa8.57□□□□□ -1.04
USP39-212ENST00000465514 TMCO5AQ8N6Q1 288 aa8.57□□□□□ -1.04
USP39-212ENST00000465514 LRRC17Q8N6Y2 441 aa8.57□□□□□ -1.04
USP39-212ENST00000465514 TOR1AIP2Q8NFQ8 470 aa8.57□□□□□ -1.04
USP39-212ENST00000465514 OR5W2Q8NH69 310 aa8.57□□□□□ -1.04
USP39-212ENST00000465514 AGR3Q8TD06 166 aa8.57□□□□□ -1.04
USP39-212ENST00000465514 SFXN5Q8TD22 340 aa8.57□□□□□ -1.04
USP39-212ENST00000465514 COQ8BQ96D53 544 aa8.57□□□□□ -1.04
USP39-212ENST00000465514 C3orf30Q96M34 536 aa8.57□□□□□ -1.04
USP39-212ENST00000465514 OR7D2Q96RA2 312 aa8.57□□□□□ -1.04
USP39-212ENST00000465514 SDF2Q99470 211 aa8.57□□□□□ -1.04
USP39-212ENST00000465514 PSD2Q9BQI7 771 aa8.57□□□□□ -1.04
USP39-212ENST00000465514 C1orf50Q9BV19 199 aa8.57□□□□□ -1.04
USP39-212ENST00000465514 PPCSQ9HAB8 311 aa8.57□□□□□ -1.04
USP39-212ENST00000465514 BCO1Q9HAY6 547 aa8.57□□□□□ -1.04
USP39-212ENST00000465514 ATAD3AQ9NVI7 634 aa8.57□□□□□ -1.04
USP39-212ENST00000465514 KLHL9Q9P2J3 617 aa8.57□□□□□ -1.04
USP39-212ENST00000465514 A0A0A6YYJ9 748 aa8.56□□□□□ -1.04
USP39-212ENST00000465514 ESPNB1AK53 854 aa8.56□□□□□ -1.04
USP39-212ENST00000465514 SHISA9B4DS77 424 aa8.56□□□□□ -1.04
USP39-212ENST00000465514 SLCO1B7G3V0H7 640 aa8.56□□□□□ -1.04
USP39-212ENST00000465514 ETV2O00321 342 aaPredicted RBP8.56□□□□□ -1.04
USP39-212ENST00000465514 SMAD9O15198 467 aaKnown RBP8.56□□□□□ -1.04
USP39-212ENST00000465514 CFLARO15519 480 aa8.56□□□□□ -1.04
USP39-212ENST00000465514 CYTIPO60759 359 aa8.56□□□□□ -1.04
USP39-212ENST00000465514 LYPLA1O75608 230 aaPredicted RBP8.56□□□□□ -1.04
USP39-212ENST00000465514 RGS9O75916 674 aaPredicted RBP8.56□□□□□ -1.04
USP39-212ENST00000465514 LY6HO94772 140 aa8.56□□□□□ -1.04
USP39-212ENST00000465514 SLU7O95391 586 aaKnown RBP8.56□□□□□ -1.04
USP39-212ENST00000465514 H6PDO95479 791 aa8.56□□□□□ -1.04
USP39-212ENST00000465514 CSF3P09919 207 aa8.56□□□□□ -1.04
USP39-212ENST00000465514 UBL4AP11441 157 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms