RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 RAD52P43351 418 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 GDI2P50395 445 aaKnown RBP6.75□□□□□ -1.33
USP48-206ENST00000464577 ZNF136P52737 540 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 PSMA6P60900 246 aaKnown RBP6.75□□□□□ -1.33
USP48-206ENST00000464577 ERVK-21P61565 698 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 SEC61A1P61619 476 aaKnown RBP6.75□□□□□ -1.33
USP48-206ENST00000464577 ACTA2P62736 377 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 ACTG2P63267 376 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 IL10RAQ13651 578 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 TMEM255AQ5JRV8 349 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 FAM199XQ6PEV8 388 aaPredicted RBP6.75□□□□□ -1.33
USP48-206ENST00000464577 UNQ9370/PRO34162Q6UXP9 181 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 RPTNQ6XPR3 784 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 ESPNLQ6ZVH7 1005 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 NUDT18Q6ZVK8 323 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 TMPRSS11FQ6ZWK6 438 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 HIST3H2AQ7L7L0 130 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 TMCO2Q7Z6W1 182 aaPredicted RBP6.75□□□□□ -1.33
USP48-206ENST00000464577 AMZ2Q86W34 360 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 CCDC116Q8IYX3 515 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 MEIOBQ8N635 442 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 OR13C5Q8NGS8 318 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 OR52I2Q8NH67 350 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 CYB5D2Q8WUJ1 264 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 C15orf40Q8WUR7 153 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 THEM6Q8WUY1 208 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 MYLIPQ8WY64 445 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 CNOT9Q92600 299 aaKnown RBP6.75□□□□□ -1.33
USP48-206ENST00000464577 HIST1H2ACQ93077 130 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 FBXW5Q969U6 566 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 ZNF558Q96NG5 402 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 SEC22CQ9BRL7 303 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 MRI1Q9BV20 369 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 DPH1Q9BZG8 443 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 CHIAQ9BZP6 476 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 NOX3Q9HBY0 568 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 IFT46Q9NQC8 304 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 SPHK2Q9NRA0 654 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 CA10Q9NS85 328 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 NTMQ9P121 344 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 IRAK3Q9Y616 596 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 GLOD5A6NK44 160 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 ZNF879B4DU55 563 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 NRG2O14511 850 aaPredicted RBP6.75□□□□□ -1.33
USP48-206ENST00000464577 PPM1DO15297 605 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 GPRIN2O60269 458 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 FMO6PO60774 539 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 AQP8O94778 261 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 NDUFB6O95139 128 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 LRG1P02750 347 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 LPLP06858 475 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 MRPL3P09001 348 aaKnown RBP6.75□□□□□ -1.33
USP48-206ENST00000464577 CLTBP09497 229 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 C6P13671 934 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 GABRA1P14867 456 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 IL9P15248 144 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 ELNP15502 786 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 ZNF3P17036 446 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 PRKACAP17612 351 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 ATP5A1P25705 553 aaKnown RBP6.75□□□□□ -1.33
USP48-206ENST00000464577 MAPK3P27361 379 aaPredicted RBP6.75□□□□□ -1.33
USP48-206ENST00000464577 PTGER1P34995 402 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 TSFMP43897 325 aaKnown RBP6.75□□□□□ -1.33
USP48-206ENST00000464577 DLX5P56178 289 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 RPS11P62280 158 aaKnown RBP eCLIP6.75□□□□□ -1.33
USP48-206ENST00000464577 EEF1A1P68104 462 aaKnown RBP6.75□□□□□ -1.33
USP48-206ENST00000464577 ILF3Q12906 894 aaKnown RBP eCLIP6.75□□□□□ -1.334e-7■□□□□ 9.7
USP48-206ENST00000464577 GK2Q14410 553 aaPredicted RBP6.75□□□□□ -1.33
USP48-206ENST00000464577 UBXN2BQ14CS0 331 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 ZNF750Q32MQ0 723 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 POM121L1PQ3SYA9 428 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 CST9Q5W186 159 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 OR5M10Q6IEU7 315 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 SLC25A25Q6KCM7 469 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 RPL22L1Q6P5R6 122 aaKnown RBP6.75□□□□□ -1.33
USP48-206ENST00000464577 ABHD17CQ6PCB6 329 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 ZC3H14Q6PJT7 736 aaKnown RBP6.75□□□□□ -1.33
USP48-206ENST00000464577 TMUB2Q71RG4 321 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 UBE2Q1Q7Z7E8 422 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 IZUMO1Q8IYV9 350 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 RAB42Q8N4Z0 105 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 OR9A2Q8NGT5 310 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 ADAMTS15Q8TE58 950 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 TMEM239Q8WW34 195 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 ASB13Q8WXK3 278 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 PNPLA2Q96AD5 504 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 MS4A6EQ96DS6 147 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 SLC25A38Q96DW6 304 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 SLC35A4Q96G79 324 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 ZNF681Q96N22 645 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 LRFN5Q96NI6 719 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 MS4A4EQ96PG1 132 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 ORAI3Q9BRQ5 295 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 C1QTNF6Q9BXI9 259 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 TTYH1Q9H313 450 aaPredicted RBP6.75□□□□□ -1.33
USP48-206ENST00000464577 EQTNQ9NQ60 294 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 PRDM7Q9NQW5 492 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.75□□□□□ -1.33
USP48-206ENST00000464577 MED11Q9P086 117 aa6.75□□□□□ -1.33
USP48-206ENST00000464577 ZNF69Q9UC07 566 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms