RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 C15orf54Q8N8G6 183 aa3.89□□□□□ -1.79
PTCD3-205ENST00000464541 OR52K1Q8NGK4 314 aa3.89□□□□□ -1.79
PTCD3-205ENST00000464541 C7orf33Q8WU49 177 aa3.89□□□□□ -1.79
PTCD3-205ENST00000464541 FAHD2AQ96GK7 314 aa3.89□□□□□ -1.79
PTCD3-205ENST00000464541 TTC25Q96NG3 672 aa3.89□□□□□ -1.79
PTCD3-205ENST00000464541 OR5B2Q96R09 309 aa3.89□□□□□ -1.79
PTCD3-205ENST00000464541 TESK2Q96S53 571 aa3.89□□□□□ -1.79
PTCD3-205ENST00000464541 MCHR1Q99705 422 aa3.89□□□□□ -1.79
PTCD3-205ENST00000464541 PAIP2Q9BPZ3 127 aaKnown RBP3.89□□□□□ -1.79
PTCD3-205ENST00000464541 DUSP16Q9BY84 665 aa3.89□□□□□ -1.79
PTCD3-205ENST00000464541 SRXN1Q9BYN0 137 aa3.89□□□□□ -1.79
PTCD3-205ENST00000464541 RMND5AQ9H871 391 aa3.89□□□□□ -1.79
PTCD3-205ENST00000464541 GORASP2Q9H8Y8 452 aa3.89□□□□□ -1.79
PTCD3-205ENST00000464541 FANCEQ9HB96 536 aa3.89□□□□□ -1.79
PTCD3-205ENST00000464541 PALMDQ9NP74 551 aa3.89□□□□□ -1.79
PTCD3-205ENST00000464541 WRAP73Q9P2S5 460 aaPredicted RBP3.89□□□□□ -1.79
PTCD3-205ENST00000464541 LCMT1Q9UIC8 334 aa3.89□□□□□ -1.79
PTCD3-205ENST00000464541 MAB21L2Q9Y586 359 aa3.89□□□□□ -1.79
PTCD3-205ENST00000464541 A0A0U1RQV5 110 aa3.88□□□□□ -1.79
PTCD3-205ENST00000464541 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.88□□□□□ -1.79
PTCD3-205ENST00000464541 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.88□□□□□ -1.79
PTCD3-205ENST00000464541 MAPK13O15264 365 aa3.88□□□□□ -1.79
PTCD3-205ENST00000464541 ERLIN1O75477 346 aa3.88□□□□□ -1.79
PTCD3-205ENST00000464541 TPM1P09493 284 aa3.88□□□□□ -1.79
PTCD3-205ENST00000464541 GALP22466 123 aa3.88□□□□□ -1.79
PTCD3-205ENST00000464541 CALB2P22676 271 aa3.88□□□□□ -1.79
PTCD3-205ENST00000464541 TLE4Q04727 773 aa3.88□□□□□ -1.79
PTCD3-205ENST00000464541 ST3GAL3Q11203 375 aa3.88□□□□□ -1.79
PTCD3-205ENST00000464541 LINC01620Q4KN68 170 aa3.88□□□□□ -1.79
PTCD3-205ENST00000464541 IL34Q6ZMJ4 242 aa3.88□□□□□ -1.79
PTCD3-205ENST00000464541 MKXQ8IYA7 352 aa3.88□□□□□ -1.79
PTCD3-205ENST00000464541 GCNT2Q8N0V5 402 aa3.88□□□□□ -1.79
PTCD3-205ENST00000464541 OR6C4Q8NGE1 309 aa3.88□□□□□ -1.79
PTCD3-205ENST00000464541 AGR3Q8TD06 166 aa3.88□□□□□ -1.79
PTCD3-205ENST00000464541 ZNF285Q96NJ3 590 aa3.88□□□□□ -1.79
PTCD3-205ENST00000464541 CHIAQ9BZP6 476 aa3.88□□□□□ -1.79
PTCD3-205ENST00000464541 CRLF2Q9HC73 371 aa3.88□□□□□ -1.79
PTCD3-205ENST00000464541 PAK1IP1Q9NWT1 392 aaPredicted RBP3.88□□□□□ -1.79
PTCD3-205ENST00000464541 ZMAT5Q9UDW3 170 aaKnown RBP3.88□□□□□ -1.79
PTCD3-205ENST00000464541 ANAPC7Q9UJX3 599 aa3.88□□□□□ -1.79
PTCD3-205ENST00000464541 RAI1Q7Z5J4 1906 aaPredicted RBP3.87□□□□□ -1.79
PTCD3-205ENST00000464541 PP2D1A8MPX8 630 aa3.87□□□□□ -1.79
PTCD3-205ENST00000464541 POLR3GO15318 223 aaPredicted RBP3.87□□□□□ -1.79
PTCD3-205ENST00000464541 JAK2O60674 1132 aa3.87□□□□□ -1.79
PTCD3-205ENST00000464541 SLITRK3O94933 977 aa3.87□□□□□ -1.79
PTCD3-205ENST00000464541 MFN2O95140 757 aa3.87□□□□□ -1.79
PTCD3-205ENST00000464541 ASGR1P07306 291 aa3.87□□□□□ -1.79
PTCD3-205ENST00000464541 EPB41P11171 864 aaKnown RBP3.87□□□□□ -1.79
PTCD3-205ENST00000464541 CCDC130P13994 396 aa3.87□□□□□ -1.79
PTCD3-205ENST00000464541 TNNI3P19429 210 aa3.87□□□□□ -1.79
PTCD3-205ENST00000464541 OTX2P32243 289 aa3.87□□□□□ -1.79
PTCD3-205ENST00000464541 RFC4P35249 363 aa3.87□□□□□ -1.79
PTCD3-205ENST00000464541 ADRA1AP35348 466 aa3.87□□□□□ -1.79
PTCD3-205ENST00000464541 DEKP35659 375 aaKnown RBP3.87□□□□□ -1.79
PTCD3-205ENST00000464541 EIF4EBP2Q13542 120 aaPredicted RBP3.87□□□□□ -1.79
PTCD3-205ENST00000464541 IDI1Q13907 227 aa3.87□□□□□ -1.79
PTCD3-205ENST00000464541 RCN1Q15293 331 aa3.87□□□□□ -1.79
PTCD3-205ENST00000464541 TMEM52BQ4KMG9 183 aa3.87□□□□□ -1.79
PTCD3-205ENST00000464541 LCE3AQ5TA76 89 aa3.87□□□□□ -1.79
PTCD3-205ENST00000464541 NANOGNBQ7Z5D8 188 aa3.87□□□□□ -1.79
PTCD3-205ENST00000464541 TMEM17Q86X19 198 aa3.87□□□□□ -1.79
PTCD3-205ENST00000464541 ZNF679Q8IYX0 411 aa3.87□□□□□ -1.79
PTCD3-205ENST00000464541 EIF1ADQ8N9N8 165 aaKnown RBP3.87□□□□□ -1.79
PTCD3-205ENST00000464541 OR10T2Q8NGX3 314 aa3.87□□□□□ -1.79
PTCD3-205ENST00000464541 AENQ8WTP8 325 aaKnown RBP3.87□□□□□ -1.79
PTCD3-205ENST00000464541 DNAJA4Q8WW22 397 aaPredicted RBP3.87□□□□□ -1.79
PTCD3-205ENST00000464541 SELENOMQ8WWX9 145 aa3.87□□□□□ -1.79
PTCD3-205ENST00000464541 AKR1E2Q96JD6 320 aa3.87□□□□□ -1.79
PTCD3-205ENST00000464541 GPA33Q99795 319 aa3.87□□□□□ -1.79
PTCD3-205ENST00000464541 CRNKL1Q9BZJ0 848 aaKnown RBP3.87□□□□□ -1.79
PTCD3-205ENST00000464541 RAB33BQ9H082 229 aa3.87□□□□□ -1.79
PTCD3-205ENST00000464541 SH2D2AQ9NP31 389 aa3.87□□□□□ -1.79
PTCD3-205ENST00000464541 RAB20Q9NX57 234 aa3.87□□□□□ -1.79
PTCD3-205ENST00000464541 PSME2Q9UL46 239 aa3.87□□□□□ -1.79
PTCD3-205ENST00000464541 B9D1Q9UPM9 204 aa3.87□□□□□ -1.79
PTCD3-205ENST00000464541 CHTOPQ9Y3Y2 248 aaKnown RBP3.87□□□□□ -1.79
PTCD3-205ENST00000464541 ZNF705EA8MWA4 302 aaPredicted RBP3.86□□□□□ -1.79
PTCD3-205ENST00000464541 ABCD4O14678 606 aa3.86□□□□□ -1.79
PTCD3-205ENST00000464541 SPOPO43791 374 aa3.86□□□□□ -1.79
PTCD3-205ENST00000464541 PRB2P02812 416 aaPredicted RBP3.86□□□□□ -1.79
PTCD3-205ENST00000464541 PSMA2P25787 234 aa3.86□□□□□ -1.79
PTCD3-205ENST00000464541 RDXP35241 583 aaKnown RBP3.86□□□□□ -1.79
PTCD3-205ENST00000464541 UGT1A5P35504 534 aa3.86□□□□□ -1.79
PTCD3-205ENST00000464541 CD151P48509 253 aa3.86□□□□□ -1.79
PTCD3-205ENST00000464541 ETV1P50549 477 aa3.86□□□□□ -1.79
PTCD3-205ENST00000464541 CAV2P51636 162 aa3.86□□□□□ -1.79
PTCD3-205ENST00000464541 UCNP55089 124 aa3.86□□□□□ -1.79
PTCD3-205ENST00000464541 SLC10A7Q0GE19 358 aa3.86□□□□□ -1.79
PTCD3-205ENST00000464541 LAGE3Q14657 143 aa3.86□□□□□ -1.79
PTCD3-205ENST00000464541 SYCP1Q15431 976 aa3.86□□□□□ -1.79
PTCD3-205ENST00000464541 TRIP10Q15642 601 aa3.86□□□□□ -1.79
PTCD3-205ENST00000464541 CHI3L2Q15782 390 aa3.86□□□□□ -1.79
PTCD3-205ENST00000464541 SLC36A3Q495N2 470 aa3.86□□□□□ -1.79
PTCD3-205ENST00000464541 NADK2Q4G0N4 442 aa3.86□□□□□ -1.79
PTCD3-205ENST00000464541 LIPNQ5VXI9 398 aa3.86□□□□□ -1.79
PTCD3-205ENST00000464541 METAP1DQ6UB28 335 aaPredicted RBP3.86□□□□□ -1.79
PTCD3-205ENST00000464541 SYT10Q6XYQ8 523 aa3.86□□□□□ -1.79
PTCD3-205ENST00000464541 APTXQ7Z2E3 356 aaKnown RBP3.86□□□□□ -1.79
PTCD3-205ENST00000464541 CENPLQ8N0S6 344 aaPredicted RBP3.86□□□□□ -1.79
PTCD3-205ENST00000464541 M1APQ8TC57 530 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms