RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 CLPSP04118 112 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 HRGP04196 525 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 COX4I1P13073 169 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 HOXB6P17509 224 aaKnown RBP3.29□□□□□ -1.88
SCFD1-204ENST00000463622 JAK1P23458 1154 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 CPOXP36551 454 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 FEN1P39748 380 aaKnown RBP3.29□□□□□ -1.88
SCFD1-204ENST00000463622 XCR1P46094 333 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 MRPL19P49406 292 aaKnown RBP3.29□□□□□ -1.88
SCFD1-204ENST00000463622 ATP4BP51164 291 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 CASP6P55212 293 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 RAB38P57729 211 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 NCALDP61601 193 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 STXBP1P61764 594 aaKnown RBP3.29□□□□□ -1.88
SCFD1-204ENST00000463622 RHAGQ02094 409 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 FOLH1Q04609 750 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 RBPJQ06330 500 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 TFF3Q07654 80 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 ZNF763Q0D2J5 394 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 FAM53BQ14153 422 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 RCAN2Q14206 197 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 GFOD2Q3B7J2 385 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 TMEM35AQ53FP2 167 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 KRTCAP3Q53RY4 240 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 FAAH2Q6GMR7 532 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 DEF8Q6ZN54 512 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 LINC00696Q6ZRV3 163 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 TRPM8Q7Z2W7 1104 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 GPR180Q86V85 440 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 CHERPQ8IWX8 916 aaKnown RBP3.29□□□□□ -1.88
SCFD1-204ENST00000463622 KIF2BQ8N4N8 673 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 TTC29Q8NA56 475 aaPredicted RBP3.29□□□□□ -1.88
SCFD1-204ENST00000463622 TTLQ8NG68 377 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 OR11G2Q8NGC1 345 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 OR9A2Q8NGT5 310 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 OR51Q1Q8NH59 317 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 OR5AK3PQ8NH89 298 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 THOC3Q96J01 351 aaKnown RBP3.29□□□□□ -1.88
SCFD1-204ENST00000463622 SERINC2Q96SA4 455 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 SIKE1Q9BRV8 207 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 TBCDQ9BTW9 1192 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 RSPO3Q9BXY4 272 aaPredicted RBP3.29□□□□□ -1.88
SCFD1-204ENST00000463622 DPY30Q9C005 99 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 GLIPR2Q9H4G4 154 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 REEP4Q9H6H4 257 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 WDR54Q9H977 334 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 ANKHQ9HCJ1 492 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 TRPC4Q9UBN4 977 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 KCNN3Q9UGI6 736 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 ATP6V1HQ9UI12 483 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 TINAGQ9UJW2 476 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 ATRQ13535 2644 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 IGLV3-12A0A075B6K2 115 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 IGKV2D-30A0A075B6S6 120 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 IGKV3D-11A0A0A0MRZ8 115 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 DYTNA2CJ06 578 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 A8MUA0 341 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 ERAL1O75616 437 aaKnown RBP3.29□□□□□ -1.88
SCFD1-204ENST00000463622 SLC22A3O75751 556 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 HPP00738 406 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 ANXA2P07355 339 aaKnown RBP3.29□□□□□ -1.88
SCFD1-204ENST00000463622 HOXD4P09016 255 aaPredicted RBP3.29□□□□□ -1.88
SCFD1-204ENST00000463622 COX7A2P14406 83 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 IDO1P14902 403 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 CPN2P22792 545 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 GSTM2P28161 218 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 SERPINB1P30740 379 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 IDUAP35475 653 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 FRKP42685 505 aaPredicted RBP3.29□□□□□ -1.88
SCFD1-204ENST00000463622 POLR2JP52435 117 aaKnown RBP3.29□□□□□ -1.88
SCFD1-204ENST00000463622 MVDP53602 400 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 HBA1P69905 142 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 ARG2P78540 354 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 PHEXP78562 749 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 GABPB1Q06547 395 aaPredicted RBP3.29□□□□□ -1.88
SCFD1-204ENST00000463622 ZNF33BQ06732 778 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 BNIP1Q12981 228 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 HERC3Q15034 1050 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 CEBPEQ15744 281 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 MAPK11Q15759 364 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 GSTA3Q16772 222 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 TCTE1Q5JU00 501 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 IRAK1BP1Q5VVH5 260 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 FAM91A1Q658Y4 838 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 SLC48A1Q6P1K1 146 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 C8orf82Q6P1X6 216 aaPredicted RBP3.29□□□□□ -1.88
SCFD1-204ENST00000463622 MZT2AQ6P582 158 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 TLDC1Q6P9B6 456 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 DLEU7Q6UYE1 221 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 C16orf47Q6ZP98 133 aaPredicted RBP3.29□□□□□ -1.88
SCFD1-204ENST00000463622 ABHD13Q7L211 337 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 CAMKMTQ7Z624 323 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 DOLPP1Q86YN1 238 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 OR7G2Q8NG99 324 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 LILRB4Q8NHJ6 448 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 FBXO30Q8TB52 745 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 STT3BQ8TCJ2 826 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 PNPT1Q8TCS8 783 aaKnown RBP3.29□□□□□ -1.88
SCFD1-204ENST00000463622 NRGNQ92686 78 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 GTF2H4Q92759 462 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms