RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 CHST2Q9Y4C5 530 aa17.83■□□□□ 0.44
COL9A3-204ENST00000463487 FAM215AQ9Y5M1 114 aa17.83■□□□□ 0.44
COL9A3-204ENST00000463487 HIVEP3Q5T1R4 2406 aa17.82■□□□□ 0.44
COL9A3-204ENST00000463487 CLEC18AA5D8T8 446 aa17.82■□□□□ 0.44
COL9A3-204ENST00000463487 ADAMDEC1O15204 470 aa17.82■□□□□ 0.44
COL9A3-204ENST00000463487 TPST1O60507 370 aa17.82■□□□□ 0.44
COL9A3-204ENST00000463487 ADAM11O75078 769 aa17.82■□□□□ 0.44
COL9A3-204ENST00000463487 GCM2O75603 506 aaPredicted RBP17.82■□□□□ 0.44
COL9A3-204ENST00000463487 SYNGR4O95473 234 aa17.82■□□□□ 0.44
COL9A3-204ENST00000463487 LDLRP01130 860 aa17.82■□□□□ 0.44
COL9A3-204ENST00000463487 IL2RAP01589 272 aa17.82■□□□□ 0.44
COL9A3-204ENST00000463487 TFPIP10646 304 aa17.82■□□□□ 0.44
COL9A3-204ENST00000463487 AGAP20933 346 aa17.82■□□□□ 0.44
COL9A3-204ENST00000463487 CXCR1P25024 350 aa17.82■□□□□ 0.44
COL9A3-204ENST00000463487 HTR1EP28566 365 aa17.82■□□□□ 0.44
COL9A3-204ENST00000463487 TACR3P29371 465 aa17.82■□□□□ 0.44
COL9A3-204ENST00000463487 TIMP3P35625 211 aa17.82■□□□□ 0.44
COL9A3-204ENST00000463487 CLK1P49759 484 aaKnown RBP17.82■□□□□ 0.44
COL9A3-204ENST00000463487 CLDN15P56746 228 aa17.82■□□□□ 0.44
COL9A3-204ENST00000463487 DUSP7Q16829 419 aa17.82■□□□□ 0.44
COL9A3-204ENST00000463487 RIPPLY2Q5TAB7 128 aa17.82■□□□□ 0.44
COL9A3-204ENST00000463487 XKRXQ6PP77 449 aa17.82■□□□□ 0.44
COL9A3-204ENST00000463487 CLEC18BQ6UXF7 455 aa17.82■□□□□ 0.44
COL9A3-204ENST00000463487 GGNQ86UU5 652 aa17.82■□□□□ 0.44
COL9A3-204ENST00000463487 CLEC18CQ8NCF0 446 aa17.82■□□□□ 0.44
COL9A3-204ENST00000463487 ASB5Q8WWX0 329 aa17.82■□□□□ 0.44
COL9A3-204ENST00000463487 WNT2BQ93097 391 aa17.82■□□□□ 0.44
COL9A3-204ENST00000463487 FAM162AQ96A26 154 aa17.82■□□□□ 0.44
COL9A3-204ENST00000463487 DDIT4LQ96D03 193 aa17.82■□□□□ 0.44
COL9A3-204ENST00000463487 ZFP3Q96NJ6 502 aa17.82■□□□□ 0.44
COL9A3-204ENST00000463487 UCN2Q96RP3 112 aa17.82■□□□□ 0.44
COL9A3-204ENST00000463487 CDRT15Q96T59 188 aa17.82■□□□□ 0.44
COL9A3-204ENST00000463487 NPAS1Q99742 590 aa17.82■□□□□ 0.44
COL9A3-204ENST00000463487 PRRG4Q9BZD6 226 aa17.82■□□□□ 0.44
COL9A3-204ENST00000463487 TMEM27Q9HBJ8 222 aa17.82■□□□□ 0.44
COL9A3-204ENST00000463487 CTPS2Q9NRF8 586 aa17.82■□□□□ 0.44
COL9A3-204ENST00000463487 USP22Q9UPT9 525 aa17.82■□□□□ 0.44
COL9A3-204ENST00000463487 FASNP49327 2511 aaKnown RBP17.81■□□□□ 0.44
COL9A3-204ENST00000463487 TMED7-TICAM2A0A0A6YYA0 188 aa17.81■□□□□ 0.44
COL9A3-204ENST00000463487 SLC22A20A6NK97 555 aa17.81■□□□□ 0.44
COL9A3-204ENST00000463487 HSPB2A8KAH6 182 aa17.81■□□□□ 0.44
COL9A3-204ENST00000463487 TNFSF11O14788 317 aa17.81■□□□□ 0.44
COL9A3-204ENST00000463487 FRS3O43559 492 aa17.81■□□□□ 0.44
COL9A3-204ENST00000463487 FMO6PO60774 539 aa17.81■□□□□ 0.44
COL9A3-204ENST00000463487 ZG16O60844 167 aa17.81■□□□□ 0.44
COL9A3-204ENST00000463487 FESP07332 822 aa17.81■□□□□ 0.44
COL9A3-204ENST00000463487 GLI4P10075 376 aa17.81■□□□□ 0.44
COL9A3-204ENST00000463487 PRG2P13727 222 aa17.81■□□□□ 0.44
COL9A3-204ENST00000463487 HSD17B1P14061 328 aa17.81■□□□□ 0.44
COL9A3-204ENST00000463487 CARD18P57730 90 aa17.81■□□□□ 0.44
COL9A3-204ENST00000463487 NUP107P57740 925 aa17.81■□□□□ 0.44
COL9A3-204ENST00000463487 HSPB2Q16082 182 aa17.81■□□□□ 0.44
COL9A3-204ENST00000463487 TMEM176BQ3YBM2 270 aaPredicted RBP17.81■□□□□ 0.44
COL9A3-204ENST00000463487 GLIPR1L2Q4G1C9 344 aa17.81■□□□□ 0.44
COL9A3-204ENST00000463487 CYBRD1Q53TN4 286 aa17.81■□□□□ 0.44
COL9A3-204ENST00000463487 SYT14P1Q58G82 188 aa17.81■□□□□ 0.44
COL9A3-204ENST00000463487 RTL6Q6ICC9 239 aa17.81■□□□□ 0.44
COL9A3-204ENST00000463487 OR2A2Q6IF42 318 aa17.81■□□□□ 0.44
COL9A3-204ENST00000463487 ZNF808Q8N4W9 903 aaPredicted RBP17.81■□□□□ 0.44
COL9A3-204ENST00000463487 LSMEM1Q8N8F7 131 aa17.81■□□□□ 0.44
COL9A3-204ENST00000463487 RBM15BQ8NDT2 890 aaKnown RBP17.81■□□□□ 0.44
COL9A3-204ENST00000463487 OR10D3Q8NH80 312 aa17.81■□□□□ 0.44
COL9A3-204ENST00000463487 DNAJA4Q8WW22 397 aaPredicted RBP17.81■□□□□ 0.44
COL9A3-204ENST00000463487 CPNE4Q96A23 557 aaPredicted RBP17.81■□□□□ 0.44
COL9A3-204ENST00000463487 ADAM19Q9H013 955 aa17.81■□□□□ 0.44
COL9A3-204ENST00000463487 C1orf21Q9H246 121 aa17.81■□□□□ 0.44
COL9A3-204ENST00000463487 TMED7Q9Y3B3 224 aa17.81■□□□□ 0.44
COL9A3-204ENST00000463487 MYO7BQ6PIF6 2116 aa17.81■□□□□ 0.44
COL9A3-204ENST00000463487 MED12Q93074 2177 aa17.8■□□□□ 0.44
COL9A3-204ENST00000463487 MBD3L4A6NDZ8 208 aaPredicted RBP17.8■□□□□ 0.44
COL9A3-204ENST00000463487 MBD3L3A6NE82 208 aaPredicted RBP17.8■□□□□ 0.44
COL9A3-204ENST00000463487 MBD3L5A6NJ08 208 aaPredicted RBP17.8■□□□□ 0.44
COL9A3-204ENST00000463487 ZNF208O43345 1280 aa17.8■□□□□ 0.44
COL9A3-204ENST00000463487 IL11P20809 199 aa17.8■□□□□ 0.44
COL9A3-204ENST00000463487 CD247P20963 164 aa17.8■□□□□ 0.44
COL9A3-204ENST00000463487 CHRNB4P30926 498 aa17.8■□□□□ 0.44
COL9A3-204ENST00000463487 SUCLG1P53597 346 aaKnown RBP17.8■□□□□ 0.44
COL9A3-204ENST00000463487 CSNK2A1P68400 391 aaPredicted RBP17.8■□□□□ 0.44
COL9A3-204ENST00000463487 NRF1Q16656 503 aa17.8■□□□□ 0.44
COL9A3-204ENST00000463487 PPP4R4Q6NUP7 873 aa17.8■□□□□ 0.44
COL9A3-204ENST00000463487 MRGPRGQ86SM5 289 aa17.8■□□□□ 0.44
COL9A3-204ENST00000463487 ADGRE4PQ86SQ3 457 aa17.8■□□□□ 0.44
COL9A3-204ENST00000463487 GPR32P1Q8NGA4 272 aa17.8■□□□□ 0.44
COL9A3-204ENST00000463487 MBD3L2Q8NHZ7 208 aaPredicted RBP17.8■□□□□ 0.44
COL9A3-204ENST00000463487 TPD52L3Q96J77 140 aa17.8■□□□□ 0.44
COL9A3-204ENST00000463487 OR5B2Q96R09 309 aa17.8■□□□□ 0.44
COL9A3-204ENST00000463487 ARHGDIGQ99819 225 aa17.8■□□□□ 0.44
COL9A3-204ENST00000463487 C12orf10Q9HB07 376 aa17.8■□□□□ 0.44
COL9A3-204ENST00000463487 CLCF1Q9UBD9 225 aa17.8■□□□□ 0.44
COL9A3-204ENST00000463487 MAGEL2Q9UJ55 1249 aa17.8■□□□□ 0.44
COL9A3-204ENST00000463487 OSGIN1Q9UJX0 560 aa17.8■□□□□ 0.44
COL9A3-204ENST00000463487 RPS6KA6Q9UK32 745 aa17.8■□□□□ 0.44
COL9A3-204ENST00000463487 SH3GLB1Q9Y371 365 aa17.8■□□□□ 0.44
COL9A3-204ENST00000463487 HDGFL3Q9Y3E1 203 aa17.8■□□□□ 0.44
COL9A3-204ENST00000463487 PHF3Q92576 2039 aaKnown RBP17.8■□□□□ 0.44
COL9A3-204ENST00000463487 UBR5O95071 2799 aaPredicted RBP17.8■□□□□ 0.44
COL9A3-204ENST00000463487 HELZ2Q9BYK8 2649 aaKnown RBP17.79■□□□□ 0.44
COL9A3-204ENST00000463487 ELOA3DA6NLF2 546 aaPredicted RBP17.79■□□□□ 0.44
COL9A3-204ENST00000463487 H0YC42 278 aa17.79■□□□□ 0.44
COL9A3-204ENST00000463487 UBOX5O94941 541 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms