RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 NOVA1P51513 510 aaKnown RBP2.45□□□□□ -2.02
HPS3-203ENST00000460822 GTF2A1P52655 376 aaPredicted RBP2.45□□□□□ -2.02
HPS3-203ENST00000460822 RPS6P62753 249 aaKnown RBP2.45□□□□□ -2.02
HPS3-203ENST00000460822 GSTO1P78417 241 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 PLOD1Q02809 727 aaPredicted RBP2.45□□□□□ -2.02
HPS3-203ENST00000460822 RGS1Q08116 209 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 SFT2D3Q587I9 215 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 ACER2Q5QJU3 275 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 RAET1LQ5VY80 246 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 BSPRYQ5W0U4 402 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 TTC19Q6DKK2 380 aaPredicted RBP2.45□□□□□ -2.02
HPS3-203ENST00000460822 FAM71F2Q6NXP2 309 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 FAM173BQ6P4H8 233 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 RNASEKQ6P5S7 137 aaKnown RBP2.45□□□□□ -2.02
HPS3-203ENST00000460822 UQCC3Q6UW78 93 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 GSG1LQ6UXU4 331 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 APOOLQ6UXV4 268 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 DHDDSQ86SQ9 333 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 DCUN1D3Q8IWE4 304 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 KATNAL2Q8IYT4 538 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 CLEC4FQ8N1N0 589 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 ALLCQ8N6M5 410 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 MFSD9Q8NBP5 474 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 AQP11Q8NBQ7 271 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 TBCKQ8TEA7 893 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.45□□□□□ -2.02
HPS3-203ENST00000460822 NTNG2Q96CW9 530 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 MOCOSQ96EN8 888 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 C11orf24Q96F05 449 aaPredicted RBP2.45□□□□□ -2.02
HPS3-203ENST00000460822 SLC38A2Q96QD8 506 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 MTMR9Q96QG7 549 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 FAM173AQ9BQD7 235 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 SYT15Q9BQS2 421 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 CABLES2Q9BTV7 478 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 PARD6BQ9BYG5 372 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 STMN4Q9H169 189 aaPredicted RBP2.45□□□□□ -2.02
HPS3-203ENST00000460822 AUNIPQ9H7T9 357 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 ANKRA2Q9H9E1 313 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 ELL3Q9HB65 397 aaPredicted RBP2.45□□□□□ -2.02
HPS3-203ENST00000460822 ZNF160Q9HCG1 818 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 POLE4Q9NR33 117 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 GCNT4Q9P109 453 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 THAP10Q9P2Z0 257 aaPredicted RBP2.45□□□□□ -2.02
HPS3-203ENST00000460822 CACNG5Q9UF02 275 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 CYTH4Q9UIA0 394 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 TRAF3IP3Q9Y228 551 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 TIMM10BQ9Y5J6 103 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 USP16Q9Y5T5 823 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 NPTNQ9Y639 398 aa2.45□□□□□ -2.02
HPS3-203ENST00000460822 ECM29Q5VYK3 1845 aa2.44□□□□□ -2.02
HPS3-203ENST00000460822 CRB1P82279 1406 aa2.44□□□□□ -2.02
HPS3-203ENST00000460822 POGZQ7Z3K3 1410 aa2.44□□□□□ -2.02
HPS3-203ENST00000460822 ALKQ9UM73 1620 aa2.44□□□□□ -2.02
HPS3-203ENST00000460822 MED1Q15648 1581 aaPredicted RBP2.44□□□□□ -2.02
HPS3-203ENST00000460822 CEP170BQ9Y4F5 1589 aaPredicted RBP2.44□□□□□ -2.02
HPS3-203ENST00000460822 A0A087X002 238 aa2.44□□□□□ -2.02
HPS3-203ENST00000460822 TRGV8A0A0C4DH27 118 aa2.44□□□□□ -2.02
HPS3-203ENST00000460822 A0A1W2PNV4 684 aa2.44□□□□□ -2.02
HPS3-203ENST00000460822 LRP5LA4QPB2 252 aa2.44□□□□□ -2.02
HPS3-203ENST00000460822 GOLGA6L4A6NEF3 574 aa2.44□□□□□ -2.02
HPS3-203ENST00000460822 ARHGEF33A8MVX0 844 aa2.44□□□□□ -2.02
HPS3-203ENST00000460822 G3V4G9 280 aa2.44□□□□□ -2.02
HPS3-203ENST00000460822 GOLGA8SH3BPF8 625 aa2.44□□□□□ -2.02
HPS3-203ENST00000460822 POLR2DO15514 142 aaKnown RBP2.44□□□□□ -2.02
HPS3-203ENST00000460822 AKR7A2O43488 359 aa2.44□□□□□ -2.02
HPS3-203ENST00000460822 FLOT1O75955 427 aa2.44□□□□□ -2.02
HPS3-203ENST00000460822 DUS4LO95620 317 aaKnown RBP2.44□□□□□ -2.02
HPS3-203ENST00000460822 OTCP00480 354 aa2.44□□□□□ -2.02
HPS3-203ENST00000460822 CA1P00915 261 aaPredicted RBP2.44□□□□□ -2.02
HPS3-203ENST00000460822 JCHAINP01591 159 aa2.44□□□□□ -2.02
HPS3-203ENST00000460822 WNT2P09544 360 aa2.44□□□□□ -2.02
HPS3-203ENST00000460822 ALOX5P09917 674 aa2.44□□□□□ -2.02
HPS3-203ENST00000460822 RHOXF2BP0C7M4 288 aa2.44□□□□□ -2.02
HPS3-203ENST00000460822 HSMCR30P0CW71 290 aa2.44□□□□□ -2.02
HPS3-203ENST00000460822 ETS2P15036 469 aa2.44□□□□□ -2.02
HPS3-203ENST00000460822 MMP11P24347 488 aa2.44□□□□□ -2.02
HPS3-203ENST00000460822 ATP5A1P25705 553 aaKnown RBP2.44□□□□□ -2.02
HPS3-203ENST00000460822 EPS15P42566 896 aa2.44□□□□□ -2.02
HPS3-203ENST00000460822 SLC11A1P49279 550 aa2.44□□□□□ -2.02
HPS3-203ENST00000460822 ATP1B3P54709 279 aa2.44□□□□□ -2.02
HPS3-203ENST00000460822 CLDN8P56748 225 aa2.44□□□□□ -2.02
HPS3-203ENST00000460822 BDH1Q02338 343 aa2.44□□□□□ -2.02
HPS3-203ENST00000460822 ZNF33BQ06732 778 aa2.44□□□□□ -2.02
HPS3-203ENST00000460822 DNAJC3Q13217 504 aa2.44□□□□□ -2.02
HPS3-203ENST00000460822 C1orf61Q13536 156 aa2.44□□□□□ -2.02
HPS3-203ENST00000460822 ALKBH6Q3KRA9 238 aa2.44□□□□□ -2.02
HPS3-203ENST00000460822 CYBRD1Q53TN4 286 aa2.44□□□□□ -2.02
HPS3-203ENST00000460822 PIP5KL1Q5T9C9 394 aa2.44□□□□□ -2.02
HPS3-203ENST00000460822 VITQ6UXI7 678 aa2.44□□□□□ -2.02
HPS3-203ENST00000460822 STOX1Q6ZVD7 989 aa2.44□□□□□ -2.02
HPS3-203ENST00000460822 EIF3MQ7L2H7 374 aaKnown RBP2.44□□□□□ -2.02
HPS3-203ENST00000460822 MOB3BQ86TA1 216 aa2.44□□□□□ -2.02
HPS3-203ENST00000460822 METTL4Q8N3J2 472 aa2.44□□□□□ -2.02
HPS3-203ENST00000460822 Q8N9G6 341 aaPredicted RBP2.44□□□□□ -2.02
HPS3-203ENST00000460822 FAM83FQ8NEG4 500 aaPredicted RBP2.44□□□□□ -2.02
HPS3-203ENST00000460822 OR51G2Q8NGK0 314 aa2.44□□□□□ -2.02
HPS3-203ENST00000460822 OR1B1Q8NGR6 318 aa2.44□□□□□ -2.02
HPS3-203ENST00000460822 FAM81AQ8TBF8 368 aa2.44□□□□□ -2.02
HPS3-203ENST00000460822 C10orf35Q96D05 121 aa2.44□□□□□ -2.02
HPS3-203ENST00000460822 IFT74Q96LB3 600 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms