RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 PAHP00439 452 aa13.76□□□□□ -0.21
PTPRU-205ENST00000460170 CROCCQ5TZA2 2017 aa13.76□□□□□ -0.21
PTPRU-205ENST00000460170 HACD4Q5VWC8 232 aa13.76□□□□□ -0.21
PTPRU-205ENST00000460170 RPL22L1Q6P5R6 122 aaKnown RBP13.76□□□□□ -0.21
PTPRU-205ENST00000460170 FAM83FQ8NEG4 500 aaPredicted RBP13.76□□□□□ -0.21
PTPRU-205ENST00000460170 CNOT9Q92600 299 aaKnown RBP13.76□□□□□ -0.21
PTPRU-205ENST00000460170 LTB4R2Q9NPC1 389 aa13.76□□□□□ -0.21
PTPRU-205ENST00000460170 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.76□□□□□ -0.21
PTPRU-205ENST00000460170 RAD51DO75771 328 aa13.76□□□□□ -0.21
PTPRU-205ENST00000460170 NCR1O76036 304 aa13.76□□□□□ -0.21
PTPRU-205ENST00000460170 CLUP10909 449 aa13.76□□□□□ -0.21
PTPRU-205ENST00000460170 SAXO2Q658L1 398 aa13.76□□□□□ -0.21
PTPRU-205ENST00000460170 GDF7Q7Z4P5 450 aa13.76□□□□□ -0.21
PTPRU-205ENST00000460170 SYNPRQ8TBG9 265 aa13.76□□□□□ -0.21
PTPRU-205ENST00000460170 TNFRSF13CQ96RJ3 184 aa13.76□□□□□ -0.21
PTPRU-205ENST00000460170 ZNF587Q96SQ5 575 aaPredicted RBP13.76□□□□□ -0.21
PTPRU-205ENST00000460170 CLEC2DQ9UHP7 191 aa13.76□□□□□ -0.21
PTPRU-205ENST00000460170 PRRT4C9JH25 899 aa13.75□□□□□ -0.21
PTPRU-205ENST00000460170 MEN1O00255 615 aa13.75□□□□□ -0.21
PTPRU-205ENST00000460170 NARSO43776 548 aaKnown RBP13.75□□□□□ -0.21
PTPRU-205ENST00000460170 EIF2DP41214 584 aaKnown RBP13.75□□□□□ -0.21
PTPRU-205ENST00000460170 DLX2Q07687 328 aaPredicted RBP13.75□□□□□ -0.21
PTPRU-205ENST00000460170 TMEM64Q6YI46 380 aa13.75□□□□□ -0.21
PTPRU-205ENST00000460170 VN1R2Q8NFZ6 395 aa13.75□□□□□ -0.21
PTPRU-205ENST00000460170 STOML3Q8TAV4 291 aa13.75□□□□□ -0.21
PTPRU-205ENST00000460170 PRR14Q9BWN1 585 aa13.75□□□□□ -0.21
PTPRU-205ENST00000460170 LDAHQ9H6V9 325 aa13.75□□□□□ -0.21
PTPRU-205ENST00000460170 MBNL1Q9NR56 388 aaKnown RBP13.75□□□□□ -0.21
PTPRU-205ENST00000460170 PRELID1Q9Y255 219 aa13.75□□□□□ -0.21
PTPRU-205ENST00000460170 VDAC3Q9Y277 283 aa13.75□□□□□ -0.21
PTPRU-205ENST00000460170 GIFP27352 417 aa13.75□□□□□ -0.21
PTPRU-205ENST00000460170 CD38P28907 300 aa13.75□□□□□ -0.21
PTPRU-205ENST00000460170 RPS5P46782 204 aaKnown RBP13.75□□□□□ -0.21
PTPRU-205ENST00000460170 DAP3P51398 398 aaKnown RBP13.75□□□□□ -0.21
PTPRU-205ENST00000460170 GPR18Q14330 331 aa13.75□□□□□ -0.21
PTPRU-205ENST00000460170 EEF1A1P5Q5VTE0 462 aa13.75□□□□□ -0.21
PTPRU-205ENST00000460170 BRIX1Q8TDN6 353 aaKnown RBP13.75□□□□□ -0.21
PTPRU-205ENST00000460170 ASB16Q96NS5 453 aa13.75□□□□□ -0.21
PTPRU-205ENST00000460170 CRB3Q9BUF7 120 aa13.75□□□□□ -0.21
PTPRU-205ENST00000460170 FTSJ1Q9UET6 329 aa13.75□□□□□ -0.21
PTPRU-205ENST00000460170 SYNGR4O95473 234 aa13.75□□□□□ -0.21
PTPRU-205ENST00000460170 TFP02787 698 aa13.75□□□□□ -0.21
PTPRU-205ENST00000460170 HTR1FP30939 366 aa13.75□□□□□ -0.21
PTPRU-205ENST00000460170 EMP2P54851 167 aa13.75□□□□□ -0.21
PTPRU-205ENST00000460170 MTFR2Q6P444 385 aa13.75□□□□□ -0.21
PTPRU-205ENST00000460170 IL20RBQ6UXL0 311 aa13.75□□□□□ -0.21
PTPRU-205ENST00000460170 TECPR1Q7Z6L1 1165 aa13.75□□□□□ -0.21
PTPRU-205ENST00000460170 SLC35F3Q8IY50 421 aa13.75□□□□□ -0.21
PTPRU-205ENST00000460170 LSM14AQ8ND56 463 aaKnown RBP13.75□□□□□ -0.21
PTPRU-205ENST00000460170 STRADBQ9C0K7 418 aa13.75□□□□□ -0.21
PTPRU-205ENST00000460170 SRPK3Q9UPE1 567 aa13.75□□□□□ -0.21
PTPRU-205ENST00000460170 PLEKHM1Q9Y4G2 1056 aa13.75□□□□□ -0.21
PTPRU-205ENST00000460170 ARPC1BO15143 372 aaKnown RBP13.75□□□□□ -0.21
PTPRU-205ENST00000460170 AQP9O43315 295 aa13.75□□□□□ -0.21
PTPRU-205ENST00000460170 CD6P30203 668 aa13.75□□□□□ -0.21
PTPRU-205ENST00000460170 EFR3AQ14156 821 aa13.75□□□□□ -0.21
PTPRU-205ENST00000460170 KCNJ8Q15842 424 aa13.75□□□□□ -0.21
PTPRU-205ENST00000460170 AWAT2Q6E213 333 aa13.75□□□□□ -0.21
PTPRU-205ENST00000460170 KCTD20Q7Z5Y7 419 aa13.75□□□□□ -0.21
PTPRU-205ENST00000460170 TMEM150AQ86TG1 271 aa13.75□□□□□ -0.21
PTPRU-205ENST00000460170 TMEM255BQ8WV15 326 aa13.75□□□□□ -0.21
PTPRU-205ENST00000460170 TCTN2Q96GX1 697 aa13.75□□□□□ -0.21
PTPRU-205ENST00000460170 PLCXD1Q9NUJ7 323 aa13.75□□□□□ -0.21
PTPRU-205ENST00000460170 TRIM64CA6NLI5 447 aa13.74□□□□□ -0.21
PTPRU-205ENST00000460170 SLC16A7O60669 478 aa13.74□□□□□ -0.21
PTPRU-205ENST00000460170 SC5DO75845 299 aa13.74□□□□□ -0.21
PTPRU-205ENST00000460170 RAB3DO95716 219 aa13.74□□□□□ -0.21
PTPRU-205ENST00000460170 CSF1P09603 554 aa13.74□□□□□ -0.21
PTPRU-205ENST00000460170 FOSL2P15408 326 aa13.74□□□□□ -0.21
PTPRU-205ENST00000460170 CD34P28906 385 aa13.74□□□□□ -0.21
PTPRU-205ENST00000460170 TMEM31Q5JXX7 168 aa13.74□□□□□ -0.21
PTPRU-205ENST00000460170 FAM198BQ6UWH4 519 aa13.74□□□□□ -0.21
PTPRU-205ENST00000460170 GABARAPL3Q9BY60 117 aa13.74□□□□□ -0.21
PTPRU-205ENST00000460170 OR2S2Q9NQN1 319 aa13.74□□□□□ -0.21
PTPRU-205ENST00000460170 AKR1C4P17516 323 aa13.74□□□□□ -0.21
PTPRU-205ENST00000460170 CASP3P42574 277 aa13.74□□□□□ -0.21
PTPRU-205ENST00000460170 PRICKLE2Q7Z3G6 844 aa13.74□□□□□ -0.21
PTPRU-205ENST00000460170 MMP21Q8N119 569 aa13.74□□□□□ -0.21
PTPRU-205ENST00000460170 COQ10AQ96MF6 247 aa13.74□□□□□ -0.21
PTPRU-205ENST00000460170 ZNF304Q9HCX3 659 aa13.74□□□□□ -0.21
PTPRU-205ENST00000460170 UBR3Q6ZT12 1888 aa13.74□□□□□ -0.21
PTPRU-205ENST00000460170 SOCS6O14544 535 aa13.74□□□□□ -0.21
PTPRU-205ENST00000460170 RFPL3O75679 317 aa13.74□□□□□ -0.21
PTPRU-205ENST00000460170 RBMS1P29558 406 aaKnown RBP13.74□□□□□ -0.21
PTPRU-205ENST00000460170 TRIM23P36406 574 aa13.74□□□□□ -0.21
PTPRU-205ENST00000460170 CRMP1Q14194 572 aa13.74□□□□□ -0.21
PTPRU-205ENST00000460170 HBMQ6B0K9 141 aa13.74□□□□□ -0.21
PTPRU-205ENST00000460170 SHISA6Q6ZSJ9 500 aa13.74□□□□□ -0.21
PTPRU-205ENST00000460170 TMEM179BQ7Z7N9 219 aa13.74□□□□□ -0.21
PTPRU-205ENST00000460170 PTOV1Q86YD1 416 aa13.74□□□□□ -0.21
PTPRU-205ENST00000460170 C19orf47Q8N9M1 422 aaKnown RBP13.74□□□□□ -0.21
PTPRU-205ENST00000460170 GALNT11Q8NCW6 608 aa13.74□□□□□ -0.21
PTPRU-205ENST00000460170 MS4A6EQ96DS6 147 aa13.74□□□□□ -0.21
PTPRU-205ENST00000460170 KATNB1Q9BVA0 655 aa13.74□□□□□ -0.21
PTPRU-205ENST00000460170 F5P12259 2224 aa13.74□□□□□ -0.21
PTPRU-205ENST00000460170 ADAMTSL1Q8N6G6 1762 aa13.74□□□□□ -0.21
PTPRU-205ENST00000460170 LGI1O95970 557 aa13.74□□□□□ -0.21
PTPRU-205ENST00000460170 PLATP00750 562 aa13.74□□□□□ -0.21
PTPRU-205ENST00000460170 OR2T7P0C7T2 308 aa13.74□□□□□ -0.21
PTPRU-205ENST00000460170 KIAA0895LQ68EN5 471 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms