RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 C1QTNF12Q5T7M4 302 aa9.63□□□□□ -0.87
UBR4-208ENST00000459947 ZNF613Q6PF04 617 aa9.63□□□□□ -0.87
UBR4-208ENST00000459947 LILRA2Q8N149 483 aa9.63□□□□□ -0.87
UBR4-208ENST00000459947 LSMEM1Q8N8F7 131 aa9.63□□□□□ -0.87
UBR4-208ENST00000459947 OR52E4Q8NGH9 312 aa9.63□□□□□ -0.87
UBR4-208ENST00000459947 PIGXQ8TBF5 258 aa9.63□□□□□ -0.87
UBR4-208ENST00000459947 BCAS4Q8TDM0 211 aa9.63□□□□□ -0.87
UBR4-208ENST00000459947 SMPDL3BQ92485 455 aa9.63□□□□□ -0.87
UBR4-208ENST00000459947 GMPPAQ96IJ6 420 aaPredicted RBP9.63□□□□□ -0.87
UBR4-208ENST00000459947 ADGRG7Q96K78 797 aa9.63□□□□□ -0.87
UBR4-208ENST00000459947 KCTD14Q9BQ13 255 aaPredicted RBP9.63□□□□□ -0.87
UBR4-208ENST00000459947 ADAM19Q9H013 955 aa9.63□□□□□ -0.87
UBR4-208ENST00000459947 IKZF5Q9H5V7 419 aa9.63□□□□□ -0.87
UBR4-208ENST00000459947 RNF122Q9H9V4 155 aa9.63□□□□□ -0.87
UBR4-208ENST00000459947 TMED7Q9Y3B3 224 aa9.63□□□□□ -0.87
UBR4-208ENST00000459947 HRH3Q9Y5N1 445 aa9.63□□□□□ -0.87
UBR4-208ENST00000459947 SEC14L5O43304 696 aa9.63□□□□□ -0.87
UBR4-208ENST00000459947 SEMA7AO75326 666 aa9.63□□□□□ -0.87
UBR4-208ENST00000459947 THRBP10828 461 aa9.63□□□□□ -0.87
UBR4-208ENST00000459947 HTR1EP28566 365 aa9.63□□□□□ -0.87
UBR4-208ENST00000459947 CLDN15P56746 228 aa9.63□□□□□ -0.87
UBR4-208ENST00000459947 LIPEQ05469 1076 aa9.63□□□□□ -0.87
UBR4-208ENST00000459947 SF3A3Q12874 501 aaKnown RBP eCLIP9.63□□□□□ -0.87
UBR4-208ENST00000459947 NRF1Q16656 503 aa9.63□□□□□ -0.87
UBR4-208ENST00000459947 MTX3Q5HYI7 312 aa9.63□□□□□ -0.87
UBR4-208ENST00000459947 RTL6Q6ICC9 239 aa9.63□□□□□ -0.87
UBR4-208ENST00000459947 SSX8Q7RTT4 187 aa9.63□□□□□ -0.87
UBR4-208ENST00000459947 KIF18BQ86Y91 864 aa9.63□□□□□ -0.87
UBR4-208ENST00000459947 SLC15A3Q8IY34 581 aa9.63□□□□□ -0.87
UBR4-208ENST00000459947 SLC38A4Q969I6 547 aa9.63□□□□□ -0.87
UBR4-208ENST00000459947 MAL2Q969L2 176 aa9.63□□□□□ -0.87
UBR4-208ENST00000459947 MAGEL2Q9UJ55 1249 aa9.63□□□□□ -0.87
UBR4-208ENST00000459947 PIEZO2Q9H5I5 2752 aa9.63□□□□□ -0.87
UBR4-208ENST00000459947 GTF3C1Q12789 2109 aa9.63□□□□□ -0.87
UBR4-208ENST00000459947 M0QX08 132 aa9.63□□□□□ -0.87
UBR4-208ENST00000459947 LGI1O95970 557 aa9.63□□□□□ -0.87
UBR4-208ENST00000459947 TFPIP10646 304 aa9.63□□□□□ -0.87
UBR4-208ENST00000459947 SLC7A2P52569 658 aa9.63□□□□□ -0.87
UBR4-208ENST00000459947 CTBP2P56545 445 aa9.63□□□□□ -0.87
UBR4-208ENST00000459947 SRYQ05066 204 aa9.63□□□□□ -0.87
UBR4-208ENST00000459947 SELPLGQ14242 412 aa9.63□□□□□ -0.87
UBR4-208ENST00000459947 SYT14P1Q58G82 188 aa9.63□□□□□ -0.87
UBR4-208ENST00000459947 ULK3Q6PHR2 472 aa9.63□□□□□ -0.87
UBR4-208ENST00000459947 MPP4Q96JB8 637 aa9.63□□□□□ -0.87
UBR4-208ENST00000459947 ZNF583Q96ND8 569 aa9.63□□□□□ -0.87
UBR4-208ENST00000459947 USB1Q9BQ65 265 aaKnown RBP9.63□□□□□ -0.87
UBR4-208ENST00000459947 ALG2Q9H553 416 aa9.63□□□□□ -0.87
UBR4-208ENST00000459947 KLHL9Q9P2J3 617 aa9.63□□□□□ -0.87
UBR4-208ENST00000459947 RNF6Q9Y252 685 aa9.63□□□□□ -0.87
UBR4-208ENST00000459947 ELOA3DA6NLF2 546 aaPredicted RBP9.62□□□□□ -0.87
UBR4-208ENST00000459947 A8MVM7 634 aa9.62□□□□□ -0.87
UBR4-208ENST00000459947 GPR171O14626 319 aa9.62□□□□□ -0.87
UBR4-208ENST00000459947 OR2T1O43869 369 aa9.62□□□□□ -0.87
UBR4-208ENST00000459947 AHSA1O95433 338 aa9.62□□□□□ -0.87
UBR4-208ENST00000459947 RYKP34925 604 aa9.62□□□□□ -0.87
UBR4-208ENST00000459947 EIF1AXP47813 144 aaKnown RBP9.62□□□□□ -0.87
UBR4-208ENST00000459947 ELOA3BQ3SY89 546 aa9.62□□□□□ -0.87
UBR4-208ENST00000459947 FBXL19-AS1Q494R0 122 aa9.62□□□□□ -0.87
UBR4-208ENST00000459947 DCST1Q5T197 706 aa9.62□□□□□ -0.87
UBR4-208ENST00000459947 GGNQ86UU5 652 aa9.62□□□□□ -0.87
UBR4-208ENST00000459947 ELOA3Q8NG57 546 aa9.62□□□□□ -0.87
UBR4-208ENST00000459947 OR10D3Q8NH80 312 aa9.62□□□□□ -0.87
UBR4-208ENST00000459947 PRPF19Q9UMS4 504 aaKnown RBP9.62□□□□□ -0.87
UBR4-208ENST00000459947 NCKAP5O14513 1909 aa9.62□□□□□ -0.87
UBR4-208ENST00000459947 ZG16O60844 167 aa9.62□□□□□ -0.87
UBR4-208ENST00000459947 ATP5HO75947 161 aa9.62□□□□□ -0.87
UBR4-208ENST00000459947 HSD17B1P14061 328 aa9.62□□□□□ -0.87
UBR4-208ENST00000459947 ENPP1P22413 925 aa9.62□□□□□ -0.87
UBR4-208ENST00000459947 IDUAP35475 653 aa9.62□□□□□ -0.87
UBR4-208ENST00000459947 STARP49675 285 aa9.62□□□□□ -0.87
UBR4-208ENST00000459947 TMEM176BQ3YBM2 270 aaPredicted RBP9.62□□□□□ -0.87
UBR4-208ENST00000459947 RABL3Q5HYI8 236 aa9.62□□□□□ -0.87
UBR4-208ENST00000459947 TMPPEQ6ZT21 453 aa9.62□□□□□ -0.87
UBR4-208ENST00000459947 UBQLNLQ8IYU4 475 aa9.62□□□□□ -0.87
UBR4-208ENST00000459947 OR6K3Q8NGY3 331 aa9.62□□□□□ -0.87
UBR4-208ENST00000459947 OSTF1Q92882 214 aa9.62□□□□□ -0.87
UBR4-208ENST00000459947 QRSL1Q9H0R6 528 aaKnown RBP9.62□□□□□ -0.87
UBR4-208ENST00000459947 POLEQ07864 2286 aa9.62□□□□□ -0.87
UBR4-208ENST00000459947 CENPVL1A0A0U1RR11 272 aa9.62□□□□□ -0.87
UBR4-208ENST00000459947 TACR3P29371 465 aa9.62□□□□□ -0.87
UBR4-208ENST00000459947 KDELR2P33947 212 aa9.62□□□□□ -0.87
UBR4-208ENST00000459947 ACAA2P42765 397 aaKnown RBP9.62□□□□□ -0.87
UBR4-208ENST00000459947 CADM2Q8N3J6 435 aa9.62□□□□□ -0.87
UBR4-208ENST00000459947 CMTM6Q9NX76 183 aa9.62□□□□□ -0.87
UBR4-208ENST00000459947 TMEM181Q9P2C4 612 aa9.62□□□□□ -0.87
UBR4-208ENST00000459947 ARHGAP21Q5T5U3 1957 aa9.62□□□□□ -0.87
UBR4-208ENST00000459947 SULT2B1O00204 365 aa9.61□□□□□ -0.87
UBR4-208ENST00000459947 VAMP5O95183 116 aa9.61□□□□□ -0.87
UBR4-208ENST00000459947 PLGP00747 810 aaPredicted RBP9.61□□□□□ -0.87
UBR4-208ENST00000459947 GPIP06744 558 aa9.61□□□□□ -0.87
UBR4-208ENST00000459947 GSK3BP49841 420 aa9.61□□□□□ -0.87
UBR4-208ENST00000459947 RASSF2P50749 326 aa9.61□□□□□ -0.87
UBR4-208ENST00000459947 NDUFAF6Q330K2 333 aa9.61□□□□□ -0.87
UBR4-208ENST00000459947 DNAL1Q4LDG9 190 aa9.61□□□□□ -0.87
UBR4-208ENST00000459947 STK32CQ86UX6 486 aa9.61□□□□□ -0.87
UBR4-208ENST00000459947 CYP4Z1Q86W10 505 aa9.61□□□□□ -0.87
UBR4-208ENST00000459947 ZG16BQ96DA0 208 aa9.61□□□□□ -0.87
UBR4-208ENST00000459947 CTPS2Q9NRF8 586 aa9.61□□□□□ -0.87
UBR4-208ENST00000459947 OSGIN1Q9UJX0 560 aa9.61□□□□□ -0.87
UBR4-208ENST00000459947 PACSIN3Q9UKS6 424 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 224.3 ms