RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 TIGARQ9NQ88 270 aa15.53■□□□□ 0.08
USP39-208ENST00000455732 IFT52Q9Y366 437 aa15.53■□□□□ 0.08
USP39-208ENST00000455732 F8P00451 2351 aa15.53■□□□□ 0.08
USP39-208ENST00000455732 EVPLLA8MZ36 301 aa15.52■□□□□ 0.08
USP39-208ENST00000455732 MSTNO14793 375 aa15.52■□□□□ 0.08
USP39-208ENST00000455732 SYNGR4O95473 234 aa15.52■□□□□ 0.08
USP39-208ENST00000455732 ETS2P15036 469 aa15.52■□□□□ 0.08
USP39-208ENST00000455732 ADSLP30566 484 aaPredicted RBP15.52■□□□□ 0.08
USP39-208ENST00000455732 RYKP34925 604 aa15.52■□□□□ 0.08
USP39-208ENST00000455732 APOBEC1P41238 236 aaKnown RBP15.52■□□□□ 0.08
USP39-208ENST00000455732 KIR2DL2P43627 348 aaPredicted RBP15.52■□□□□ 0.08
USP39-208ENST00000455732 PCYT1AP49585 367 aa15.52■□□□□ 0.08
USP39-208ENST00000455732 CARD18P57730 90 aa15.52■□□□□ 0.08
USP39-208ENST00000455732 MERTKQ12866 999 aa15.52■□□□□ 0.08
USP39-208ENST00000455732 EPS8Q12929 822 aa15.52■□□□□ 0.08
USP39-208ENST00000455732 LARS2Q15031 903 aaKnown RBP15.52■□□□□ 0.08
USP39-208ENST00000455732 ZNF239Q16600 458 aaKnown RBP15.52■□□□□ 0.08
USP39-208ENST00000455732 TMEM176BQ3YBM2 270 aaPredicted RBP15.52■□□□□ 0.08
USP39-208ENST00000455732 RUNDC3AQ59EK9 446 aa15.52■□□□□ 0.08
USP39-208ENST00000455732 COQ5Q5HYK3 327 aa15.52■□□□□ 0.08
USP39-208ENST00000455732 VRK2Q86Y07 508 aa15.52■□□□□ 0.08
USP39-208ENST00000455732 ZNF563Q8TA94 476 aa15.52■□□□□ 0.08
USP39-208ENST00000455732 SLC35B4Q969S0 331 aa15.52■□□□□ 0.08
USP39-208ENST00000455732 STARD4Q96DR4 205 aa15.52■□□□□ 0.08
USP39-208ENST00000455732 GMPPAQ96IJ6 420 aaPredicted RBP15.52■□□□□ 0.08
USP39-208ENST00000455732 CGREF1Q99674 301 aa15.52■□□□□ 0.08
USP39-208ENST00000455732 CACYBPQ9HB71 228 aaKnown RBP15.52■□□□□ 0.08
USP39-208ENST00000455732 SAR1AQ9NR31 198 aa15.52■□□□□ 0.08
USP39-208ENST00000455732 SERINC1Q9NRX5 453 aa15.52■□□□□ 0.08
USP39-208ENST00000455732 GLRX2Q9NS18 164 aa15.52■□□□□ 0.08
USP39-208ENST00000455732 CRIM1Q9NZV1 1036 aa15.52■□□□□ 0.08
USP39-208ENST00000455732 SPIN1Q9Y657 262 aaPredicted RBP15.52■□□□□ 0.08
USP39-208ENST00000455732 CFAP73A6NFT4 308 aa15.51■□□□□ 0.07
USP39-208ENST00000455732 A8MXE2 369 aa15.51■□□□□ 0.07
USP39-208ENST00000455732 C5orf58C9J3I9 102 aa15.51■□□□□ 0.07
USP39-208ENST00000455732 AP3D1O14617 1153 aa15.51■□□□□ 0.07
USP39-208ENST00000455732 SS18L1O75177 396 aaPredicted RBP15.51■□□□□ 0.07
USP39-208ENST00000455732 PGM3O95394 542 aa15.51■□□□□ 0.07
USP39-208ENST00000455732 PABPC4LP0CB38 370 aaKnown RBP15.51■□□□□ 0.07
USP39-208ENST00000455732 CD8BP10966 210 aa15.51■□□□□ 0.07
USP39-208ENST00000455732 UQCRBP14927 111 aa15.51■□□□□ 0.07
USP39-208ENST00000455732 FKBP2P26885 142 aaKnown RBP15.51■□□□□ 0.07
USP39-208ENST00000455732 SLC7A1P30825 629 aa15.51■□□□□ 0.07
USP39-208ENST00000455732 KIR2DL3P43628 341 aa15.51■□□□□ 0.07
USP39-208ENST00000455732 HTR3AP46098 478 aa15.51■□□□□ 0.07
USP39-208ENST00000455732 RAC3P60763 192 aa15.51■□□□□ 0.07
USP39-208ENST00000455732 CDK6Q00534 326 aa15.51■□□□□ 0.07
USP39-208ENST00000455732 VWA1Q6PCB0 445 aa15.51■□□□□ 0.07
USP39-208ENST00000455732 FAM214BQ7L5A3 538 aa15.51■□□□□ 0.07
USP39-208ENST00000455732 KIF18BQ86Y91 864 aa15.51■□□□□ 0.07
USP39-208ENST00000455732 ZZZ3Q8IYH5 903 aa15.51■□□□□ 0.07
USP39-208ENST00000455732 CNEP1R1Q8N9A8 125 aa15.51■□□□□ 0.07
USP39-208ENST00000455732 RNF128Q8TEB7 428 aa15.51■□□□□ 0.07
USP39-208ENST00000455732 C10orf82Q8WW14 230 aa15.51■□□□□ 0.07
USP39-208ENST00000455732 ANKRD27Q96NW4 1050 aa15.51■□□□□ 0.07
USP39-208ENST00000455732 SPATA9Q9BWV2 254 aa15.51■□□□□ 0.07
USP39-208ENST00000455732 RBM24Q9BX46 236 aaKnown RBP15.51■□□□□ 0.07
USP39-208ENST00000455732 SRXN1Q9BYN0 137 aa15.51■□□□□ 0.07
USP39-208ENST00000455732 PRRG4Q9BZD6 226 aa15.51■□□□□ 0.07
USP39-208ENST00000455732 ARMC7Q9H6L4 198 aa15.51■□□□□ 0.07
USP39-208ENST00000455732 CHRNA9Q9UGM1 479 aa15.51■□□□□ 0.07
USP39-208ENST00000455732 ZNF232Q9UNY5 417 aa15.51■□□□□ 0.07
USP39-208ENST00000455732 CHST2Q9Y4C5 530 aa15.51■□□□□ 0.07
USP39-208ENST00000455732 FAM221AA4D161 298 aa15.5■□□□□ 0.07
USP39-208ENST00000455732 FBP2O00757 339 aa15.5■□□□□ 0.07
USP39-208ENST00000455732 SLC22A2O15244 555 aa15.5■□□□□ 0.07
USP39-208ENST00000455732 CGAP01215 116 aa15.5■□□□□ 0.07
USP39-208ENST00000455732 SLC1A3P43003 542 aa15.5■□□□□ 0.07
USP39-208ENST00000455732 IDH2P48735 452 aaKnown RBP15.5■□□□□ 0.07
USP39-208ENST00000455732 KLF10Q13118 480 aa15.5■□□□□ 0.07
USP39-208ENST00000455732 NFYCQ13952 458 aa15.5■□□□□ 0.07
USP39-208ENST00000455732 MAPRE2Q15555 327 aa15.5■□□□□ 0.07
USP39-208ENST00000455732 ADRM1Q16186 407 aa15.5■□□□□ 0.07
USP39-208ENST00000455732 TRMT5Q32P41 509 aaKnown RBP15.5■□□□□ 0.07
USP39-208ENST00000455732 SYT14P1Q58G82 188 aa15.5■□□□□ 0.07
USP39-208ENST00000455732 REEP3Q6NUK4 255 aa15.5■□□□□ 0.07
USP39-208ENST00000455732 BTLAQ7Z6A9 289 aa15.5■□□□□ 0.07
USP39-208ENST00000455732 LUZP2Q86TE4 346 aa15.5■□□□□ 0.07
USP39-208ENST00000455732 OR6K3Q8NGY3 331 aa15.5■□□□□ 0.07
USP39-208ENST00000455732 NFKBIDQ8NI38 313 aa15.5■□□□□ 0.07
USP39-208ENST00000455732 GP6Q9HCN6 339 aa15.5■□□□□ 0.07
USP39-208ENST00000455732 CTPS2Q9NRF8 586 aa15.5■□□□□ 0.07
USP39-208ENST00000455732 RLIMQ9NVW2 624 aa15.5■□□□□ 0.07
USP39-208ENST00000455732 BBIP1A8MTZ0 92 aa15.49■□□□□ 0.07
USP39-208ENST00000455732 CTAG2O75638 210 aa15.49■□□□□ 0.07
USP39-208ENST00000455732 PRKAR1BP31321 381 aa15.49■□□□□ 0.07
USP39-208ENST00000455732 ACAA2P42765 397 aaKnown RBP15.49■□□□□ 0.07
USP39-208ENST00000455732 CPA2P48052 419 aa15.49■□□□□ 0.07
USP39-208ENST00000455732 CLK1P49759 484 aaKnown RBP15.49■□□□□ 0.07
USP39-208ENST00000455732 POLR2HP52434 150 aaKnown RBP15.49■□□□□ 0.07
USP39-208ENST00000455732 MAP2K6P52564 334 aa15.49■□□□□ 0.07
USP39-208ENST00000455732 SIRPAP78324 504 aa15.49■□□□□ 0.07
USP39-208ENST00000455732 RBBP4Q09028 425 aa15.49■□□□□ 0.07
USP39-208ENST00000455732 SCARB2Q14108 478 aa15.49■□□□□ 0.07
USP39-208ENST00000455732 RNPS1Q15287 305 aaKnown RBP15.49■□□□□ 0.07
USP39-208ENST00000455732 ZNF311Q5JNZ3 666 aa15.49■□□□□ 0.07
USP39-208ENST00000455732 GTF2IRD2BQ6EKJ0 949 aa15.49■□□□□ 0.07
USP39-208ENST00000455732 PPP4R4Q6NUP7 873 aa15.49■□□□□ 0.07
USP39-208ENST00000455732 ZNF550Q7Z398 422 aa15.49■□□□□ 0.07
USP39-208ENST00000455732 NET1Q7Z628 596 aaPredicted RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms