RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 PPP2R2AP63151 447 aa8.62□□□□□ -1.03
USP54-207ENST00000451492 LRRC74AQ0VAA2 488 aa8.62□□□□□ -1.03
USP54-207ENST00000451492 RASGEF1BQ0VAM2 473 aa8.62□□□□□ -1.03
USP54-207ENST00000451492 RNPS1Q15287 305 aaKnown RBP8.62□□□□□ -1.03
USP54-207ENST00000451492 SLC25A53Q5H9E4 307 aa8.62□□□□□ -1.03
USP54-207ENST00000451492 MRPL2Q5T653 305 aaKnown RBP8.62□□□□□ -1.03
USP54-207ENST00000451492 EPGNQ6UW88 154 aa8.62□□□□□ -1.03
USP54-207ENST00000451492 TFAP2EQ6VUC0 442 aa8.62□□□□□ -1.03
USP54-207ENST00000451492 STAC2Q6ZMT1 411 aa8.62□□□□□ -1.03
USP54-207ENST00000451492 ZNF836Q6ZNA1 936 aa8.62□□□□□ -1.03
USP54-207ENST00000451492 LRRC74BQ6ZQY2 392 aa8.62□□□□□ -1.03
USP54-207ENST00000451492 BEND4Q6ZU67 534 aa8.62□□□□□ -1.03
USP54-207ENST00000451492 FAM71CQ8NEG0 241 aa8.62□□□□□ -1.03
USP54-207ENST00000451492 TMEM19Q96HH6 336 aa8.62□□□□□ -1.03
USP54-207ENST00000451492 ITCHQ96J02 903 aa8.62□□□□□ -1.03
USP54-207ENST00000451492 C7orf26Q96N11 449 aa8.62□□□□□ -1.03
USP54-207ENST00000451492 TRNT1Q96Q11 434 aaKnown RBP8.62□□□□□ -1.03
USP54-207ENST00000451492 PSD2Q9BQI7 771 aa8.62□□□□□ -1.03
USP54-207ENST00000451492 ACTR6Q9GZN1 396 aa8.62□□□□□ -1.03
USP54-207ENST00000451492 SAP130Q9H0E3 1048 aa8.62□□□□□ -1.03
USP54-207ENST00000451492 TPT1P8Q9HAU6 139 aa8.62□□□□□ -1.03
USP54-207ENST00000451492 SDR39U1Q9NRG7 319 aaPredicted RBP8.62□□□□□ -1.03
USP54-207ENST00000451492 PLSCR4Q9NRQ2 329 aa8.62□□□□□ -1.03
USP54-207ENST00000451492 GLRX2Q9NS18 164 aa8.62□□□□□ -1.03
USP54-207ENST00000451492 ACER3Q9NUN7 267 aa8.62□□□□□ -1.03
USP54-207ENST00000451492 CCDC167Q9P0B6 97 aa8.62□□□□□ -1.03
USP54-207ENST00000451492 CHRNA9Q9UGM1 479 aa8.62□□□□□ -1.03
USP54-207ENST00000451492 PRSS50Q9UI38 385 aa8.62□□□□□ -1.03
USP54-207ENST00000451492 EDARQ9UNE0 448 aa8.62□□□□□ -1.03
USP54-207ENST00000451492 SPIN1Q9Y657 262 aaPredicted RBP8.62□□□□□ -1.03
USP54-207ENST00000451492 AKAP6Q13023 2319 aa8.62□□□□□ -1.03
USP54-207ENST00000451492 TMEM72A0PK05 275 aa8.61□□□□□ -1.03
USP54-207ENST00000451492 FAM234BA2RU67 622 aa8.61□□□□□ -1.03
USP54-207ENST00000451492 LYZL6O75951 148 aa8.61□□□□□ -1.03
USP54-207ENST00000451492 ADAP00813 363 aa8.61□□□□□ -1.03
USP54-207ENST00000451492 DBIP07108 87 aaKnown RBP8.61□□□□□ -1.03
USP54-207ENST00000451492 THBDP07204 575 aa8.61□□□□□ -1.03
USP54-207ENST00000451492 NUDT7P0C024 238 aa8.61□□□□□ -1.03
USP54-207ENST00000451492 IL32P24001 234 aa8.61□□□□□ -1.03
USP54-207ENST00000451492 EDNRAP25101 427 aa8.61□□□□□ -1.03
USP54-207ENST00000451492 IDH3AP50213 366 aa8.61□□□□□ -1.03
USP54-207ENST00000451492 CRISP3P54108 245 aa8.61□□□□□ -1.03
USP54-207ENST00000451492 OR2B6P58173 313 aa8.61□□□□□ -1.03
USP54-207ENST00000451492 RAC3P60763 192 aa8.61□□□□□ -1.03
USP54-207ENST00000451492 CSNK2A1P68400 391 aaPredicted RBP8.61□□□□□ -1.03
USP54-207ENST00000451492 CAPRIN1Q14444 709 aaKnown RBP8.61□□□□□ -1.03
USP54-207ENST00000451492 STK11Q15831 433 aa8.61□□□□□ -1.03
USP54-207ENST00000451492 DEFB113Q30KQ7 82 aa8.61□□□□□ -1.03
USP54-207ENST00000451492 SPNS3Q6ZMD2 512 aa8.61□□□□□ -1.03
USP54-207ENST00000451492 HDXQ7Z353 690 aa8.61□□□□□ -1.03
USP54-207ENST00000451492 GRINAQ7Z429 371 aa8.61□□□□□ -1.03
USP54-207ENST00000451492 PEX5LQ8IYB4 626 aa8.61□□□□□ -1.03
USP54-207ENST00000451492 CADM2Q8N3J6 435 aa8.61□□□□□ -1.03
USP54-207ENST00000451492 OR52P1PQ8NH57 321 aa8.61□□□□□ -1.03
USP54-207ENST00000451492 MAL2Q969L2 176 aa8.61□□□□□ -1.03
USP54-207ENST00000451492 S100PBPQ96BU1 408 aa8.61□□□□□ -1.03
USP54-207ENST00000451492 ARL5BQ96KC2 179 aa8.61□□□□□ -1.03
USP54-207ENST00000451492 FOXC2Q99958 501 aa8.61□□□□□ -1.03
USP54-207ENST00000451492 CCDC106Q9BWC9 280 aa8.61□□□□□ -1.03
USP54-207ENST00000451492 PAIP1Q9H074 479 aaKnown RBP8.61□□□□□ -1.03
USP54-207ENST00000451492 CACYBPQ9HB71 228 aaKnown RBP8.61□□□□□ -1.03
USP54-207ENST00000451492 FANCFQ9NPI8 374 aa8.61□□□□□ -1.03
USP54-207ENST00000451492 INTS9Q9NV88 658 aaKnown RBP8.61□□□□□ -1.03
USP54-207ENST00000451492 RLIMQ9NVW2 624 aa8.61□□□□□ -1.03
USP54-207ENST00000451492 KLHL9Q9P2J3 617 aa8.61□□□□□ -1.03
USP54-207ENST00000451492 LIPT1Q9Y234 373 aa8.61□□□□□ -1.03
USP54-207ENST00000451492 ZNF443Q9Y2A4 671 aaPredicted RBP8.61□□□□□ -1.03
USP54-207ENST00000451492 PCDHB14Q9Y5E9 798 aa8.61□□□□□ -1.03
USP54-207ENST00000451492 HIVEP1P15822 2718 aa8.61□□□□□ -1.03
USP54-207ENST00000451492 DSCAMO60469 2012 aa8.61□□□□□ -1.03
USP54-207ENST00000451492 TEP1Q99973 2627 aaKnown RBP8.61□□□□□ -1.03
USP54-207ENST00000451492 MAP1AP78559 2803 aaPredicted RBP8.61□□□□□ -1.03
USP54-207ENST00000451492 F8P00451 2351 aa8.6□□□□□ -1.03
USP54-207ENST00000451492 TMED7-TICAM2A0A0A6YYA0 188 aa8.6□□□□□ -1.03
USP54-207ENST00000451492 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.6□□□□□ -1.03
USP54-207ENST00000451492 TMEM247A6NEH6 219 aa8.6□□□□□ -1.03
USP54-207ENST00000451492 AGAP5A6NIR3 686 aa8.6□□□□□ -1.03
USP54-207ENST00000451492 HMGB1P1B2RPK0 211 aaPredicted RBP8.6□□□□□ -1.03
USP54-207ENST00000451492 ETV2O00321 342 aaPredicted RBP8.6□□□□□ -1.03
USP54-207ENST00000451492 FRS3O43559 492 aa8.6□□□□□ -1.03
USP54-207ENST00000451492 CYTIPO60759 359 aa8.6□□□□□ -1.03
USP54-207ENST00000451492 GOSR1O95249 250 aa8.6□□□□□ -1.03
USP54-207ENST00000451492 PLAUP00749 431 aa8.6□□□□□ -1.03
USP54-207ENST00000451492 IGHV3-9P01782 118 aa8.6□□□□□ -1.03
USP54-207ENST00000451492 YES1P07947 543 aa8.6□□□□□ -1.03
USP54-207ENST00000451492 NID1P14543 1247 aa8.6□□□□□ -1.03
USP54-207ENST00000451492 UQCRBP14927 111 aa8.6□□□□□ -1.03
USP54-207ENST00000451492 CD53P19397 219 aa8.6□□□□□ -1.03
USP54-207ENST00000451492 NCF2P19878 526 aaPredicted RBP8.6□□□□□ -1.03
USP54-207ENST00000451492 RPS4Y1P22090 263 aaKnown RBP8.6□□□□□ -1.03
USP54-207ENST00000451492 TACR3P29371 465 aa8.6□□□□□ -1.03
USP54-207ENST00000451492 APOBEC1P41238 236 aaKnown RBP8.6□□□□□ -1.03
USP54-207ENST00000451492 MVDP53602 400 aa8.6□□□□□ -1.03
USP54-207ENST00000451492 SF3A3Q12874 501 aaKnown RBP eCLIP8.6□□□□□ -1.03
USP54-207ENST00000451492 EPS8Q12929 822 aa8.6□□□□□ -1.03
USP54-207ENST00000451492 BNIP2Q12982 314 aa8.6□□□□□ -1.03
USP54-207ENST00000451492 GNA13Q14344 377 aa8.6□□□□□ -1.03
USP54-207ENST00000451492 MAPK11Q15759 364 aa8.6□□□□□ -1.03
USP54-207ENST00000451492 LIN52Q52LA3 116 aa8.6□□□□□ -1.03
USP54-207ENST00000451492 AGKQ53H12 422 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms