RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 AQP7O14520 342 aa11.78□□□□□ -0.52
VPS33A-202ENST00000451053 GNGT2O14610 69 aa11.78□□□□□ -0.52
VPS33A-202ENST00000451053 NTN1O95631 604 aa11.78□□□□□ -0.52
VPS33A-202ENST00000451053 ZNF17P17021 662 aa11.78□□□□□ -0.52
VPS33A-202ENST00000451053 BMP7P18075 431 aa11.78□□□□□ -0.52
VPS33A-202ENST00000451053 IL11P20809 199 aa11.78□□□□□ -0.52
VPS33A-202ENST00000451053 IDH2P48735 452 aaKnown RBP11.78□□□□□ -0.52
VPS33A-202ENST00000451053 RGS8P57771 180 aaPredicted RBP11.78□□□□□ -0.52
VPS33A-202ENST00000451053 SESN3P58005 492 aa11.78□□□□□ -0.52
VPS33A-202ENST00000451053 CRYZQ08257 329 aaKnown RBP11.78□□□□□ -0.52
VPS33A-202ENST00000451053 MRPL49Q13405 166 aaKnown RBP11.78□□□□□ -0.52
VPS33A-202ENST00000451053 NPTX1Q15818 432 aa11.78□□□□□ -0.52
VPS33A-202ENST00000451053 ATP6AP1Q15904 470 aa11.78□□□□□ -0.52
VPS33A-202ENST00000451053 FBXW10Q5XX13 1052 aa11.78□□□□□ -0.52
VPS33A-202ENST00000451053 ARHGAP11AQ6P4F7 1023 aa11.78□□□□□ -0.52
VPS33A-202ENST00000451053 RANBP3LQ86VV4 465 aaPredicted RBP11.78□□□□□ -0.52
VPS33A-202ENST00000451053 RBM45Q8IUH3 476 aaKnown RBP11.78□□□□□ -0.52
VPS33A-202ENST00000451053 GTPBP8Q8N3Z3 284 aaPredicted RBP11.78□□□□□ -0.52
VPS33A-202ENST00000451053 OR4D11Q8NGI4 311 aa11.78□□□□□ -0.52
VPS33A-202ENST00000451053 ZNF563Q8TA94 476 aa11.78□□□□□ -0.52
VPS33A-202ENST00000451053 VANGL1Q8TAA9 524 aaPredicted RBP11.78□□□□□ -0.52
VPS33A-202ENST00000451053 CENPNQ96H22 339 aaPredicted RBP11.78□□□□□ -0.52
VPS33A-202ENST00000451053 C7orf34Q96L11 122 aa11.78□□□□□ -0.52
VPS33A-202ENST00000451053 ZNF300Q96RE9 604 aaPredicted RBP11.78□□□□□ -0.52
VPS33A-202ENST00000451053 PIGQQ9BRB3 760 aa11.78□□□□□ -0.52
VPS33A-202ENST00000451053 PRR14Q9BWN1 585 aa11.78□□□□□ -0.52
VPS33A-202ENST00000451053 POLR2J2Q9GZM3 115 aaKnown RBP11.78□□□□□ -0.52
VPS33A-202ENST00000451053 POLR2J3Q9H1A7 115 aaKnown RBP11.78□□□□□ -0.52
VPS33A-202ENST00000451053 ACER3Q9NUN7 267 aa11.78□□□□□ -0.52
VPS33A-202ENST00000451053 ENPP4Q9Y6X5 453 aa11.78□□□□□ -0.52
VPS33A-202ENST00000451053 FREM3P0C091 2139 aa11.78□□□□□ -0.52
VPS33A-202ENST00000451053 NPIPA2E9PIF3 369 aa11.77□□□□□ -0.53
VPS33A-202ENST00000451053 NPIPA3F8WFD2 350 aa11.77□□□□□ -0.53
VPS33A-202ENST00000451053 hCG_2039718K7EN88 272 aa11.77□□□□□ -0.53
VPS33A-202ENST00000451053 ADAMDEC1O15204 470 aa11.77□□□□□ -0.53
VPS33A-202ENST00000451053 CLOCKO15516 846 aa11.77□□□□□ -0.53
VPS33A-202ENST00000451053 EFNA2O43921 213 aa11.77□□□□□ -0.53
VPS33A-202ENST00000451053 TPST2O60704 377 aa11.77□□□□□ -0.53
VPS33A-202ENST00000451053 CST1P01037 141 aa11.77□□□□□ -0.53
VPS33A-202ENST00000451053 GP1BBP13224 206 aa11.77□□□□□ -0.53
VPS33A-202ENST00000451053 UQCRBP14927 111 aa11.77□□□□□ -0.53
VPS33A-202ENST00000451053 RHCEP18577 417 aa11.77□□□□□ -0.53
VPS33A-202ENST00000451053 HTR2AP28223 471 aa11.77□□□□□ -0.53
VPS33A-202ENST00000451053 OR1E2P47887 323 aa11.77□□□□□ -0.53
VPS33A-202ENST00000451053 STARP49675 285 aa11.77□□□□□ -0.53
VPS33A-202ENST00000451053 VLDLRP98155 873 aa11.77□□□□□ -0.53
VPS33A-202ENST00000451053 GK3PQ14409 553 aa11.77□□□□□ -0.53
VPS33A-202ENST00000451053 C3AR1Q16581 482 aa11.77□□□□□ -0.53
VPS33A-202ENST00000451053 SLC25A53Q5H9E4 307 aa11.77□□□□□ -0.53
VPS33A-202ENST00000451053 NHSL2Q5HYW2 709 aa11.77□□□□□ -0.53
VPS33A-202ENST00000451053 VASNQ6EMK4 673 aa11.77□□□□□ -0.53
VPS33A-202ENST00000451053 CADM2Q8N3J6 435 aa11.77□□□□□ -0.53
VPS33A-202ENST00000451053 OR6T1Q8NGN1 323 aa11.77□□□□□ -0.53
VPS33A-202ENST00000451053 LRTOMTQ8WZ04 291 aa11.77□□□□□ -0.53
VPS33A-202ENST00000451053 ST8SIA1Q92185 356 aa11.77□□□□□ -0.53
VPS33A-202ENST00000451053 ABTB1Q969K4 478 aaPredicted RBP11.77□□□□□ -0.53
VPS33A-202ENST00000451053 MRGPRX4Q96LA9 322 aa11.77□□□□□ -0.53
VPS33A-202ENST00000451053 TIMP4Q99727 224 aa11.77□□□□□ -0.53
VPS33A-202ENST00000451053 VCX3BQ9H321 246 aa11.77□□□□□ -0.53
VPS33A-202ENST00000451053 NDUFAF4Q9P032 175 aa11.77□□□□□ -0.53
VPS33A-202ENST00000451053 TESQ9UGI8 421 aaKnown RBP11.77□□□□□ -0.53
VPS33A-202ENST00000451053 RIMS3Q9UJD0 308 aa11.77□□□□□ -0.53
VPS33A-202ENST00000451053 PRDM4Q9UKN5 801 aa11.77□□□□□ -0.53
VPS33A-202ENST00000451053 ZNF337Q9Y3M9 751 aa11.77□□□□□ -0.53
VPS33A-202ENST00000451053 SPENQ96T58 3664 aaKnown RBP11.76□□□□□ -0.53
VPS33A-202ENST00000451053 H3BML4 177 aa11.76□□□□□ -0.53
VPS33A-202ENST00000451053 PYCARD-AS1I3L0S3 204 aa11.76□□□□□ -0.53
VPS33A-202ENST00000451053 FMO6PO60774 539 aa11.76□□□□□ -0.53
VPS33A-202ENST00000451053 ACTL6AO96019 429 aa11.76□□□□□ -0.53
VPS33A-202ENST00000451053 MT-ND1P03886 318 aa11.76□□□□□ -0.53
VPS33A-202ENST00000451053 ABOP16442 354 aa11.76□□□□□ -0.53
VPS33A-202ENST00000451053 CHMP24386 653 aa11.76□□□□□ -0.53
VPS33A-202ENST00000451053 PTGS2P35354 604 aa11.76□□□□□ -0.53
VPS33A-202ENST00000451053 GCKP35557 465 aa11.76□□□□□ -0.53
VPS33A-202ENST00000451053 EIF1P41567 113 aaKnown RBP11.76□□□□□ -0.53
VPS33A-202ENST00000451053 UQCRFS1P47985 274 aa11.76□□□□□ -0.53
VPS33A-202ENST00000451053 LHX2P50458 406 aa11.76□□□□□ -0.53
VPS33A-202ENST00000451053 DLX5P56178 289 aa11.76□□□□□ -0.53
VPS33A-202ENST00000451053 SMIM11AP58511 58 aa11.76□□□□□ -0.53
VPS33A-202ENST00000451053 MERTKQ12866 999 aa11.76□□□□□ -0.53
VPS33A-202ENST00000451053 WBP2NLQ6ICG8 309 aa11.76□□□□□ -0.53
VPS33A-202ENST00000451053 OR2T5Q6IEZ7 315 aa11.76□□□□□ -0.53
VPS33A-202ENST00000451053 POMZP3Q6PJE2 187 aa11.76□□□□□ -0.53
VPS33A-202ENST00000451053 PLEKHM3Q6ZWE6 761 aa11.76□□□□□ -0.53
VPS33A-202ENST00000451053 GALNT11Q8NCW6 608 aa11.76□□□□□ -0.53
VPS33A-202ENST00000451053 OR5M9Q8NGP3 310 aa11.76□□□□□ -0.53
VPS33A-202ENST00000451053 OR2T29Q8NH02 315 aa11.76□□□□□ -0.53
VPS33A-202ENST00000451053 TMEM234Q8WY98 164 aa11.76□□□□□ -0.53
VPS33A-202ENST00000451053 SARAFQ96BY9 339 aa11.76□□□□□ -0.53
VPS33A-202ENST00000451053 PIP5K1AQ99755 562 aa11.76□□□□□ -0.53
VPS33A-202ENST00000451053 PKP2Q99959 881 aa11.76□□□□□ -0.53
VPS33A-202ENST00000451053 AMBRA1Q9C0C7 1298 aa11.76□□□□□ -0.53
VPS33A-202ENST00000451053 TMEM185BQ9H7F4 350 aa11.76□□□□□ -0.53
VPS33A-202ENST00000451053 REEP1Q9H902 201 aa11.76□□□□□ -0.53
VPS33A-202ENST00000451053 CTPS2Q9NRF8 586 aa11.76□□□□□ -0.53
VPS33A-202ENST00000451053 ZNF835Q9Y2P0 537 aa11.76□□□□□ -0.53
VPS33A-202ENST00000451053 ZNF407Q9C0G0 2248 aa11.75□□□□□ -0.53
VPS33A-202ENST00000451053 OR14I1A6ND48 311 aa11.75□□□□□ -0.53
VPS33A-202ENST00000451053 SLC19A2O60779 497 aa11.75□□□□□ -0.53
VPS33A-202ENST00000451053 E2F6O75461 281 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms