RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 AP1ARQ63HQ0 302 aa15.4■□□□□ 0.06
PRPF40A-204ENST00000450303 POMZP3Q6PJE2 187 aa15.4■□□□□ 0.06
PRPF40A-204ENST00000450303 FRRS1Q6ZNA5 592 aa15.4■□□□□ 0.06
PRPF40A-204ENST00000450303 GALNT10Q86SR1 603 aa15.4■□□□□ 0.06
PRPF40A-204ENST00000450303 MARCH3Q86UD3 253 aa15.4■□□□□ 0.06
PRPF40A-204ENST00000450303 DHFR2Q86XF0 187 aa15.4■□□□□ 0.06
PRPF40A-204ENST00000450303 C9orf106Q8NAJ2 232 aa15.4■□□□□ 0.06
PRPF40A-204ENST00000450303 BHLHE22Q8NFJ8 381 aaPredicted RBP15.4■□□□□ 0.06
PRPF40A-204ENST00000450303 PYDC1Q8WXC3 89 aa15.4■□□□□ 0.06
PRPF40A-204ENST00000450303 NSMCE2Q96MF7 247 aa15.4■□□□□ 0.06
PRPF40A-204ENST00000450303 RNF145Q96MT1 663 aa15.4■□□□□ 0.06
PRPF40A-204ENST00000450303 SFXN2Q96NB2 322 aa15.4■□□□□ 0.06
PRPF40A-204ENST00000450303 GORASP2Q9H8Y8 452 aa15.4■□□□□ 0.06
PRPF40A-204ENST00000450303 HHATLQ9HCP6 504 aa15.4■□□□□ 0.06
PRPF40A-204ENST00000450303 ADPRHL2Q9NX46 363 aa15.4■□□□□ 0.06
PRPF40A-204ENST00000450303 GMPR2Q9P2T1 348 aaKnown RBP15.4■□□□□ 0.06
PRPF40A-204ENST00000450303 RPS6KA6Q9UK32 745 aa15.4■□□□□ 0.06
PRPF40A-204ENST00000450303 LRCH1Q9Y2L9 728 aa15.4■□□□□ 0.06
PRPF40A-204ENST00000450303 CD8B2A6NJW9 211 aa15.39■□□□□ 0.05
PRPF40A-204ENST00000450303 H3BNH8 94 aa15.39■□□□□ 0.05
PRPF40A-204ENST00000450303 M0QX08 132 aa15.39■□□□□ 0.05
PRPF40A-204ENST00000450303 SCDO00767 359 aa15.39■□□□□ 0.05
PRPF40A-204ENST00000450303 GMFGO60234 142 aa15.39■□□□□ 0.05
PRPF40A-204ENST00000450303 KIAA0513O60268 411 aa15.39■□□□□ 0.05
PRPF40A-204ENST00000450303 UTS2O95399 124 aa15.39■□□□□ 0.05
PRPF40A-204ENST00000450303 CPN1P15169 458 aa15.39■□□□□ 0.05
PRPF40A-204ENST00000450303 IL7RP16871 459 aa15.39■□□□□ 0.05
PRPF40A-204ENST00000450303 AQP1P29972 269 aa15.39■□□□□ 0.05
PRPF40A-204ENST00000450303 MSX2P35548 267 aaPredicted RBP15.39■□□□□ 0.05
PRPF40A-204ENST00000450303 PCBP3P57721 371 aaKnown RBP15.39■□□□□ 0.05
PRPF40A-204ENST00000450303 ZSWIM7Q19AV6 140 aa15.39■□□□□ 0.05
PRPF40A-204ENST00000450303 LRRC23Q53EV4 343 aaPredicted RBP15.39■□□□□ 0.05
PRPF40A-204ENST00000450303 MTX3Q5HYI7 312 aa15.39■□□□□ 0.05
PRPF40A-204ENST00000450303 RPS26P11Q5JNZ5 115 aaPredicted RBP15.39■□□□□ 0.05
PRPF40A-204ENST00000450303 ENPP6Q6UWR7 440 aa15.39■□□□□ 0.05
PRPF40A-204ENST00000450303 ARSKQ6UWY0 536 aa15.39■□□□□ 0.05
PRPF40A-204ENST00000450303 OR2M3Q8NG83 312 aa15.39■□□□□ 0.05
PRPF40A-204ENST00000450303 OR52P1PQ8NH57 321 aa15.39■□□□□ 0.05
PRPF40A-204ENST00000450303 ZPLD1Q8TCW7 415 aa15.39■□□□□ 0.05
PRPF40A-204ENST00000450303 DUSP19Q8WTR2 217 aa15.39■□□□□ 0.05
PRPF40A-204ENST00000450303 LZICQ8WZA0 190 aa15.39■□□□□ 0.05
PRPF40A-204ENST00000450303 ZNF570Q96NI8 536 aa15.39■□□□□ 0.05
PRPF40A-204ENST00000450303 PCDHAC1Q9H158 963 aa15.39■□□□□ 0.05
PRPF40A-204ENST00000450303 CALHM2Q9HA72 323 aa15.39■□□□□ 0.05
PRPF40A-204ENST00000450303 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.39■□□□□ 0.05
PRPF40A-204ENST00000450303 FBXO34Q9NWN3 711 aa15.39■□□□□ 0.05
PRPF40A-204ENST00000450303 GPC6Q9Y625 555 aaPredicted RBP15.39■□□□□ 0.05
PRPF40A-204ENST00000450303 DSPPQ9NZW4 1301 aa15.39■□□□□ 0.05
PRPF40A-204ENST00000450303 MBD3L4A6NDZ8 208 aaPredicted RBP15.38■□□□□ 0.05
PRPF40A-204ENST00000450303 MBD3L3A6NE82 208 aaPredicted RBP15.38■□□□□ 0.05
PRPF40A-204ENST00000450303 MBD3L5A6NJ08 208 aaPredicted RBP15.38■□□□□ 0.05
PRPF40A-204ENST00000450303 ARPC2O15144 300 aa15.38■□□□□ 0.05
PRPF40A-204ENST00000450303 THBS1P07996 1170 aa15.38■□□□□ 0.05
PRPF40A-204ENST00000450303 NGFRP08138 427 aa15.38■□□□□ 0.05
PRPF40A-204ENST00000450303 NCK1P16333 377 aa15.38■□□□□ 0.05
PRPF40A-204ENST00000450303 HK1P19367 917 aa15.38■□□□□ 0.05
PRPF40A-204ENST00000450303 TBXA2RP21731 343 aa15.38■□□□□ 0.05
PRPF40A-204ENST00000450303 LHX2P50458 406 aa15.38■□□□□ 0.05
PRPF40A-204ENST00000450303 ZNF141Q15928 474 aa15.38■□□□□ 0.05
PRPF40A-204ENST00000450303 SPATA24Q86W54 205 aa15.38■□□□□ 0.05
PRPF40A-204ENST00000450303 ARMC8Q8IUR7 673 aa15.38■□□□□ 0.05
PRPF40A-204ENST00000450303 ZNF614Q8N883 585 aa15.38■□□□□ 0.05
PRPF40A-204ENST00000450303 OR52E4Q8NGH9 312 aa15.38■□□□□ 0.05
PRPF40A-204ENST00000450303 OR5M1Q8NGP8 315 aa15.38■□□□□ 0.05
PRPF40A-204ENST00000450303 MBD3L2Q8NHZ7 208 aaPredicted RBP15.38■□□□□ 0.05
PRPF40A-204ENST00000450303 TBL1XR1Q9BZK7 514 aa15.38■□□□□ 0.05
PRPF40A-204ENST00000450303 KLHL4Q9C0H6 718 aa15.38■□□□□ 0.05
PRPF40A-204ENST00000450303 VCXQ9H320 206 aa15.38■□□□□ 0.05
PRPF40A-204ENST00000450303 SDHAF3Q9NRP4 125 aa15.38■□□□□ 0.05
PRPF40A-204ENST00000450303 KCNN3Q9UGI6 736 aa15.38■□□□□ 0.05
PRPF40A-204ENST00000450303 SLC13A4Q9UKG4 626 aa15.38■□□□□ 0.05
PRPF40A-204ENST00000450303 ABCG2Q9UNQ0 655 aa15.38■□□□□ 0.05
PRPF40A-204ENST00000450303 SAMD4AQ9UPU9 718 aaKnown RBP15.38■□□□□ 0.05
PRPF40A-204ENST00000450303 DTNAQ9Y4J8 743 aa15.38■□□□□ 0.05
PRPF40A-204ENST00000450303 MED12LQ86YW9 2145 aa15.38■□□□□ 0.05
PRPF40A-204ENST00000450303 AGAP5A6NIR3 686 aa15.37■□□□□ 0.05
PRPF40A-204ENST00000450303 CLCA1A8K7I4 914 aa15.37■□□□□ 0.05
PRPF40A-204ENST00000450303 SYT5O00445 386 aa15.37■□□□□ 0.05
PRPF40A-204ENST00000450303 UGT2B17O75795 530 aa15.37■□□□□ 0.05
PRPF40A-204ENST00000450303 PABPC4LP0CB38 370 aaKnown RBP15.37■□□□□ 0.05
PRPF40A-204ENST00000450303 CTSSP25774 331 aa15.37■□□□□ 0.05
PRPF40A-204ENST00000450303 ASCL1P50553 236 aa15.37■□□□□ 0.05
PRPF40A-204ENST00000450303 DSCR4P56555 118 aaPredicted RBP15.37■□□□□ 0.05
PRPF40A-204ENST00000450303 B3GALT5-AS1P59052 145 aa15.37■□□□□ 0.05
PRPF40A-204ENST00000450303 FOXF2Q12947 444 aa15.37■□□□□ 0.05
PRPF40A-204ENST00000450303 GRAMD1BQ3KR37 738 aa15.37■□□□□ 0.05
PRPF40A-204ENST00000450303 LIN52Q52LA3 116 aa15.37■□□□□ 0.05
PRPF40A-204ENST00000450303 ZNF311Q5JNZ3 666 aa15.37■□□□□ 0.05
PRPF40A-204ENST00000450303 LCN8Q6JVE9 175 aa15.37■□□□□ 0.05
PRPF40A-204ENST00000450303 APOOLQ6UXV4 268 aa15.37■□□□□ 0.05
PRPF40A-204ENST00000450303 OLIG3Q7RTU3 272 aa15.37■□□□□ 0.05
PRPF40A-204ENST00000450303 ZAR1Q86SH2 424 aa15.37■□□□□ 0.05
PRPF40A-204ENST00000450303 TMEM200AQ86VY9 491 aa15.37■□□□□ 0.05
PRPF40A-204ENST00000450303 UBQLNLQ8IYU4 475 aa15.37■□□□□ 0.05
PRPF40A-204ENST00000450303 PQLC1Q8N2U9 271 aa15.37■□□□□ 0.05
PRPF40A-204ENST00000450303 FADS6Q8N9I5 356 aa15.37■□□□□ 0.05
PRPF40A-204ENST00000450303 NRG4Q8WWG1 115 aa15.37■□□□□ 0.05
PRPF40A-204ENST00000450303 EVA1AQ9H8M9 152 aa15.37■□□□□ 0.05
PRPF40A-204ENST00000450303 KLHL28Q9NXS3 571 aa15.37■□□□□ 0.05
PRPF40A-204ENST00000450303 ZNF629Q9UEG4 869 aaPredicted RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms