RNA–Protein interactions for RNA: ENST00000448450.5

HTATSF1-203, Transcript of HIV-1 Tat specific factor 1, humanhuman

TSL 5

Gene HTATSF1, Length 1,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-203ENST00000448450 TNFSF13O75888 250 aa22.42■■□□□ 1.18
HTATSF1-203ENST00000448450 HNRNPCL4P0DMR1 293 aa22.42■■□□□ 1.18
HTATSF1-203ENST00000448450 BMP2P12643 396 aa22.42■■□□□ 1.18
HTATSF1-203ENST00000448450 NID1P14543 1247 aa22.42■■□□□ 1.18
HTATSF1-203ENST00000448450 HOXB4P17483 251 aaPredicted RBP22.42■■□□□ 1.18
HTATSF1-203ENST00000448450 IDH2P48735 452 aaKnown RBP22.42■■□□□ 1.18
HTATSF1-203ENST00000448450 GCNT6Q5T4J0 391 aa22.42■■□□□ 1.18
HTATSF1-203ENST00000448450 VWA1Q6PCB0 445 aa22.42■■□□□ 1.18
HTATSF1-203ENST00000448450 ZNF836Q6ZNA1 936 aa22.42■■□□□ 1.18
HTATSF1-203ENST00000448450 PLEKHM3Q6ZWE6 761 aa22.42■■□□□ 1.18
HTATSF1-203ENST00000448450 DHDDSQ86SQ9 333 aa22.42■■□□□ 1.18
HTATSF1-203ENST00000448450 ROBO4Q8WZ75 1007 aa22.42■■□□□ 1.18
HTATSF1-203ENST00000448450 RNASE6Q93091 150 aaKnown RBP22.42■■□□□ 1.18
HTATSF1-203ENST00000448450 LRRC46Q96FV0 321 aa22.42■■□□□ 1.18
HTATSF1-203ENST00000448450 CLEC4MQ9H2X3 399 aaPredicted RBP22.42■■□□□ 1.18
HTATSF1-203ENST00000448450 RNF122Q9H9V4 155 aa22.42■■□□□ 1.18
HTATSF1-203ENST00000448450 EXOSC3Q9NQT5 275 aaKnown RBP22.42■■□□□ 1.18
HTATSF1-203ENST00000448450 PAQR5Q9NXK6 330 aaPredicted RBP22.42■■□□□ 1.18
HTATSF1-203ENST00000448450 MCTS1Q9ULC4 181 aaKnown RBP22.42■■□□□ 1.18
HTATSF1-203ENST00000448450 CLEC4AQ9UMR7 237 aa22.42■■□□□ 1.18
HTATSF1-203ENST00000448450 DSPPQ9NZW4 1301 aa22.41■■□□□ 1.18
HTATSF1-203ENST00000448450 A0A1W2PNR3 127 aa22.41■■□□□ 1.18
HTATSF1-203ENST00000448450 GJE1A6NN92 205 aa22.41■■□□□ 1.18
HTATSF1-203ENST00000448450 ETV2O00321 342 aaPredicted RBP22.41■■□□□ 1.18
HTATSF1-203ENST00000448450 SMNDC1O75940 238 aaKnown RBP eCLIP22.41■■□□□ 1.18
HTATSF1-203ENST00000448450 PEX19P40855 299 aa22.41■■□□□ 1.18
HTATSF1-203ENST00000448450 KIR2DL3P43628 341 aa22.41■■□□□ 1.18
HTATSF1-203ENST00000448450 SELENBP1Q13228 472 aa22.41■■□□□ 1.18
HTATSF1-203ENST00000448450 RUNDC3AQ59EK9 446 aa22.41■■□□□ 1.18
HTATSF1-203ENST00000448450 LSRQ86X29 649 aaPredicted RBP22.41■■□□□ 1.18
HTATSF1-203ENST00000448450 NFKBIDQ8NI38 313 aa22.41■■□□□ 1.18
HTATSF1-203ENST00000448450 STARD4Q96DR4 205 aa22.41■■□□□ 1.18
HTATSF1-203ENST00000448450 ZNF317Q96PQ6 595 aaPredicted RBP22.41■■□□□ 1.18
HTATSF1-203ENST00000448450 CPPED1Q9BRF8 314 aaPredicted RBP22.41■■□□□ 1.18
HTATSF1-203ENST00000448450 GPATCH1Q9BRR8 931 aaKnown RBP22.41■■□□□ 1.18
HTATSF1-203ENST00000448450 SERINC1Q9NRX5 453 aa22.41■■□□□ 1.18
HTATSF1-203ENST00000448450 JKAMPQ9P055 326 aa22.41■■□□□ 1.18
HTATSF1-203ENST00000448450 ZNF232Q9UNY5 417 aa22.41■■□□□ 1.18
HTATSF1-203ENST00000448450 ZNF443Q9Y2A4 671 aaPredicted RBP22.41■■□□□ 1.18
HTATSF1-203ENST00000448450 CRHP06850 196 aa22.4■■□□□ 1.18
HTATSF1-203ENST00000448450 GKN3PP0CG01 181 aa22.4■■□□□ 1.18
HTATSF1-203ENST00000448450 FCGR2AP12318 317 aa22.4■■□□□ 1.18
HTATSF1-203ENST00000448450 CCNA2P20248 432 aa22.4■■□□□ 1.18
HTATSF1-203ENST00000448450 SLC7A1P30825 629 aa22.4■■□□□ 1.18
HTATSF1-203ENST00000448450 KIR2DL2P43627 348 aaPredicted RBP22.4■■□□□ 1.18
HTATSF1-203ENST00000448450 CPA2P48052 419 aa22.4■■□□□ 1.18
HTATSF1-203ENST00000448450 EEF1A1P68104 462 aaKnown RBP22.4■■□□□ 1.18
HTATSF1-203ENST00000448450 NFYCQ13952 458 aa22.4■■□□□ 1.18
HTATSF1-203ENST00000448450 FBXL19-AS1Q494R0 122 aa22.4■■□□□ 1.18
HTATSF1-203ENST00000448450 LIN52Q52LA3 116 aa22.4■■□□□ 1.18
HTATSF1-203ENST00000448450 EEF1A1P5Q5VTE0 462 aa22.4■■□□□ 1.18
HTATSF1-203ENST00000448450 BTLAQ7Z6A9 289 aa22.4■■□□□ 1.18
HTATSF1-203ENST00000448450 CLIP4Q8N3C7 705 aa22.4■■□□□ 1.18
HTATSF1-203ENST00000448450 DPP10Q8N608 796 aa22.4■■□□□ 1.18
HTATSF1-203ENST00000448450 TSPEARQ8WU66 669 aa22.4■■□□□ 1.18
HTATSF1-203ENST00000448450 RBM24Q9BX46 236 aaKnown RBP22.4■■□□□ 1.18
HTATSF1-203ENST00000448450 SRXN1Q9BYN0 137 aa22.4■■□□□ 1.18
HTATSF1-203ENST00000448450 CACYBPQ9HB71 228 aaKnown RBP22.4■■□□□ 1.18
HTATSF1-203ENST00000448450 SAR1AQ9NR31 198 aa22.4■■□□□ 1.18
HTATSF1-203ENST00000448450 CTPS2Q9NRF8 586 aa22.4■■□□□ 1.18
HTATSF1-203ENST00000448450 KLHL14Q9P2G3 628 aa22.4■■□□□ 1.18
HTATSF1-203ENST00000448450 PACSIN3Q9UKS6 424 aa22.4■■□□□ 1.18
HTATSF1-203ENST00000448450 PGM3O95394 542 aa22.39■■□□□ 1.17
HTATSF1-203ENST00000448450 ARAFP10398 606 aa22.39■■□□□ 1.17
HTATSF1-203ENST00000448450 DNASE1P24855 282 aa22.39■■□□□ 1.17
HTATSF1-203ENST00000448450 KLF10Q13118 480 aa22.39■■□□□ 1.17
HTATSF1-203ENST00000448450 LARS2Q15031 903 aaKnown RBP22.39■■□□□ 1.17
HTATSF1-203ENST00000448450 BBS10Q8TAM1 723 aa22.39■■□□□ 1.17
HTATSF1-203ENST00000448450 OR5B2Q96R09 309 aa22.39■■□□□ 1.17
HTATSF1-203ENST00000448450 CGREF1Q99674 301 aa22.39■■□□□ 1.17
HTATSF1-203ENST00000448450 PIGMQ9H3S5 423 aa22.39■■□□□ 1.17
HTATSF1-203ENST00000448450 LIME1Q9H400 295 aa22.39■■□□□ 1.17
HTATSF1-203ENST00000448450 COQ10BQ9H8M1 238 aa22.39■■□□□ 1.17
HTATSF1-203ENST00000448450 BCL2L10Q9HD36 194 aa22.39■■□□□ 1.17
HTATSF1-203ENST00000448450 TIGARQ9NQ88 270 aa22.39■■□□□ 1.17
HTATSF1-203ENST00000448450 RASSF1Q9NS23 344 aa22.39■■□□□ 1.17
HTATSF1-203ENST00000448450 CORO2BQ9UQ03 480 aa22.39■■□□□ 1.17
HTATSF1-203ENST00000448450 CDHR4A6H8M9 788 aa22.38■■□□□ 1.17
HTATSF1-203ENST00000448450 CFAP73A6NFT4 308 aa22.38■■□□□ 1.17
HTATSF1-203ENST00000448450 FBP2O00757 339 aa22.38■■□□□ 1.17
HTATSF1-203ENST00000448450 PLGP00747 810 aaPredicted RBP22.38■■□□□ 1.17
HTATSF1-203ENST00000448450 TFPIP10646 304 aa22.38■■□□□ 1.17
HTATSF1-203ENST00000448450 GPX2P18283 190 aa22.38■■□□□ 1.17
HTATSF1-203ENST00000448450 APOBEC1P41238 236 aaKnown RBP22.38■■□□□ 1.17
HTATSF1-203ENST00000448450 CDK6Q00534 326 aa22.38■■□□□ 1.17
HTATSF1-203ENST00000448450 SELPLGQ14242 412 aa22.38■■□□□ 1.17
HTATSF1-203ENST00000448450 CAPRIN1Q14444 709 aaKnown RBP22.38■■□□□ 1.17
HTATSF1-203ENST00000448450 ZNF311Q5JNZ3 666 aa22.38■■□□□ 1.17
HTATSF1-203ENST00000448450 C3orf33Q6P1S2 294 aa22.38■■□□□ 1.17
HTATSF1-203ENST00000448450 DNAJA3Q96EY1 480 aa22.38■■□□□ 1.17
HTATSF1-203ENST00000448450 REXO5Q96IC2 774 aaKnown RBP22.38■■□□□ 1.17
HTATSF1-203ENST00000448450 ANKRD27Q96NW4 1050 aa22.38■■□□□ 1.17
HTATSF1-203ENST00000448450 ALPK1Q96QP1 1244 aa22.38■■□□□ 1.17
HTATSF1-203ENST00000448450 CCDC106Q9BWC9 280 aa22.38■■□□□ 1.17
HTATSF1-203ENST00000448450 OPN3Q9H1Y3 402 aaPredicted RBP22.38■■□□□ 1.17
HTATSF1-203ENST00000448450 IFT52Q9Y366 437 aa22.38■■□□□ 1.17
HTATSF1-203ENST00000448450 GMEB1Q9Y692 573 aa22.38■■□□□ 1.17
HTATSF1-203ENST00000448450 THBS1P07996 1170 aa22.37■■□□□ 1.17
HTATSF1-203ENST00000448450 MTPNP58546 118 aa22.37■■□□□ 1.17
HTATSF1-203ENST00000448450 EPS8Q12929 822 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms