RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 GNPNAT1Q96EK6 184 aaPredicted RBP8.43□□□□□ -1.06
NIPBL-202ENST00000448238 ZNF599Q96NL3 588 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 MUS81Q96NY9 551 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 SLC25A21Q9BQT8 299 aaPredicted RBP8.43□□□□□ -1.06
NIPBL-202ENST00000448238 PARD6AQ9NPB6 346 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 MED9Q9NWA0 146 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 MCTS1Q9ULC4 181 aaKnown RBP8.43□□□□□ -1.06
NIPBL-202ENST00000448238 GRIN2AQ12879 1464 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 MYO5CQ9NQX4 1742 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 ANTXRLA6NF34 631 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 TAAR5O14804 337 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 LALBAP00709 142 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 ADRB2P07550 413 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 CST2P09228 141 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 GIFP27352 417 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 OR3A1P47881 315 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 HHIPL1Q96JK4 782 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 PLA2G12BQ9BX93 195 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 IL36AQ9UHA7 158 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 MIA3Q5JRA6 1907 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 OR51F1A6NGY5 319 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 EMC8O43402 210 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 HNRNPH3P31942 346 aaKnown RBP8.43□□□□□ -1.06
NIPBL-202ENST00000448238 SHMT2P34897 504 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 CLCNKBP51801 687 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 HTR4Q13639 388 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 OR6V1Q8N148 313 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 OR56B1Q8NGI3 324 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 ASB17Q8WXJ9 295 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 FBXL20Q96IG2 436 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 KCNA7Q96RP8 456 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 WDR61Q9GZS3 305 aaKnown RBP8.43□□□□□ -1.06
NIPBL-202ENST00000448238 EVA1AQ9H8M9 152 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 NTN4Q9HB63 628 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 MTCH1Q9NZJ7 389 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 GNG12Q9UBI6 72 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 LHX6Q9UPM6 363 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 IGSF1Q8N6C5 1336 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 GPATCH8Q9UKJ3 1502 aaKnown RBP8.43□□□□□ -1.06
NIPBL-202ENST00000448238 ATP10BO94823 1461 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 TMEM265A0A087WTH1 108 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 TMEM200CA6NKL6 621 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 DRGXA6NNA5 263 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 ZNF732B4DXR9 585 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 YIF1AO95070 293 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 TACR2P21452 398 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 TAF10Q12962 218 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 NFATC3Q12968 1075 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 OXA1LQ15070 435 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 ACOT6Q3I5F7 207 aaPredicted RBP8.43□□□□□ -1.06
NIPBL-202ENST00000448238 GLYR1Q49A26 553 aaPredicted RBP8.43□□□□□ -1.06
NIPBL-202ENST00000448238 UNC50Q53HI1 259 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 PXDC1Q5TGL8 231 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 BLOC1S3Q6QNY0 202 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 KLHDC8BQ8IXV7 354 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 KCNK15Q9H427 330 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 AMDHD2Q9Y303 409 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 V9GY05 133 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 LRRC30A6NM36 301 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 ANHXE9PGG2 379 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 SGK494L7N484 410 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 DDAH2O95865 285 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 COX6CP09669 75 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 OMGP23515 440 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 CA5AP35218 305 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 LAPTM4AQ15012 233 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 COL5A1-AS1Q5SY13 56 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 SGK494Q96LW2 274 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 MIEN1Q9BRT3 115 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 RBM24Q9BX46 236 aaKnown RBP8.43□□□□□ -1.06
NIPBL-202ENST00000448238 ENKD1Q9H0I2 346 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 C11orf49Q9H6J7 331 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 SIX2Q9NPC8 291 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 GMPR2Q9P2T1 348 aaKnown RBP8.43□□□□□ -1.06
NIPBL-202ENST00000448238 B3GAT1Q9P2W7 334 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 A6NCN8 305 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 PLSCR1O15162 318 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 HBQ1P09105 142 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 SGSHP51688 502 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 CRYBB1P53674 252 aaPredicted RBP8.43□□□□□ -1.06
NIPBL-202ENST00000448238 INHBEP58166 350 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 PRAMEF8Q5VWM4 474 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 PRAMEF7Q5VXH5 474 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 OR9A1PQ8NGU1 263 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 FAM3CQ92520 227 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 DYRK2Q92630 601 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 TSLPQ969D9 159 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 BOCQ9BWV1 1114 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 ZNF696Q9H7X3 374 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 SLC27A5Q9Y2P5 690 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 LMX1BO60663 402 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 AIFM1O95831 613 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 F2P00734 622 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 S100A11P31949 105 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 P2RY14Q15391 338 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.43□□□□□ -1.06
NIPBL-202ENST00000448238 FAM26DQ5JW98 314 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 DESI1Q6ICB0 168 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 GLB1L2Q8IW92 636 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 LRRC25Q8N386 305 aaPredicted RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms