RNA–Protein interactions for RNA: ENST00000447376.1

SF3A1-204, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 418 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-204ENST00000447376 HIPK4Q8NE63 616 aa14.72□□□□□ -0.05
SF3A1-204ENST00000447376 FAM71CQ8NEG0 241 aa14.72□□□□□ -0.05
SF3A1-204ENST00000447376 NFKBIDQ8NI38 313 aa14.72□□□□□ -0.05
SF3A1-204ENST00000447376 FNDC9Q8TBE3 224 aa14.72□□□□□ -0.05
SF3A1-204ENST00000447376 POC1BQ8TC44 478 aa14.72□□□□□ -0.05
SF3A1-204ENST00000447376 SLC25A43Q8WUT9 341 aaPredicted RBP14.72□□□□□ -0.05
SF3A1-204ENST00000447376 CPNE4Q96A23 557 aaPredicted RBP14.72□□□□□ -0.05
SF3A1-204ENST00000447376 ZG16BQ96DA0 208 aa14.72□□□□□ -0.05
SF3A1-204ENST00000447376 ZNF607Q96SK3 696 aa14.72□□□□□ -0.05
SF3A1-204ENST00000447376 ENKD1Q9H0I2 346 aa14.72□□□□□ -0.05
SF3A1-204ENST00000447376 ACER3Q9NUN7 267 aa14.72□□□□□ -0.05
SF3A1-204ENST00000447376 PRDM4Q9UKN5 801 aa14.72□□□□□ -0.05
SF3A1-204ENST00000447376 EMC9Q9Y3B6 208 aa14.72□□□□□ -0.05
SF3A1-204ENST00000447376 CACNA1CQ13936 2221 aa14.72□□□□□ -0.05
SF3A1-204ENST00000447376 DSPPQ9NZW4 1301 aa14.71□□□□□ -0.05
SF3A1-204ENST00000447376 CFAP73A6NFT4 308 aa14.71□□□□□ -0.05
SF3A1-204ENST00000447376 FXYD1O00168 92 aa14.71□□□□□ -0.05
SF3A1-204ENST00000447376 CXCL13O43927 109 aa14.71□□□□□ -0.05
SF3A1-204ENST00000447376 TGM6O95932 706 aa14.71□□□□□ -0.05
SF3A1-204ENST00000447376 OPN1LWP04000 364 aa14.71□□□□□ -0.05
SF3A1-204ENST00000447376 RPS4Y1P22090 263 aaKnown RBP14.71□□□□□ -0.05
SF3A1-204ENST00000447376 CTBP2P56545 445 aa14.71□□□□□ -0.05
SF3A1-204ENST00000447376 SESN3P58005 492 aa14.71□□□□□ -0.05
SF3A1-204ENST00000447376 TFF3Q07654 80 aa14.71□□□□□ -0.05
SF3A1-204ENST00000447376 SELPLGQ14242 412 aa14.71□□□□□ -0.05
SF3A1-204ENST00000447376 MAPK11Q15759 364 aa14.71□□□□□ -0.05
SF3A1-204ENST00000447376 TMEM176BQ3YBM2 270 aaPredicted RBP14.71□□□□□ -0.05
SF3A1-204ENST00000447376 MRPL2Q5T653 305 aaKnown RBP14.71□□□□□ -0.05
SF3A1-204ENST00000447376 INTS11Q5TA45 600 aaKnown RBP14.71□□□□□ -0.05
SF3A1-204ENST00000447376 FAM91A1Q658Y4 838 aa14.71□□□□□ -0.05
SF3A1-204ENST00000447376 GRINAQ7Z429 371 aa14.71□□□□□ -0.05
SF3A1-204ENST00000447376 RELL2Q8NC24 303 aaPredicted RBP14.71□□□□□ -0.05
SF3A1-204ENST00000447376 OR10A6Q8NH74 314 aa14.71□□□□□ -0.05
SF3A1-204ENST00000447376 FIG4Q92562 907 aa14.71□□□□□ -0.05
SF3A1-204ENST00000447376 OSTF1Q92882 214 aa14.71□□□□□ -0.05
SF3A1-204ENST00000447376 RNASE6Q93091 150 aaKnown RBP14.71□□□□□ -0.05
SF3A1-204ENST00000447376 ZNF845Q96IR2 970 aaPredicted RBP14.71□□□□□ -0.05
SF3A1-204ENST00000447376 FANCFQ9NPI8 374 aa14.71□□□□□ -0.05
SF3A1-204ENST00000447376 GLRX2Q9NS18 164 aa14.71□□□□□ -0.05
SF3A1-204ENST00000447376 TAGLN3Q9UI15 199 aa14.71□□□□□ -0.05
SF3A1-204ENST00000447376 PACSIN3Q9UKS6 424 aa14.71□□□□□ -0.05
SF3A1-204ENST00000447376 MED12Q93074 2177 aa14.7□□□□□ -0.06
SF3A1-204ENST00000447376 A0A1W2PNV4 684 aa14.7□□□□□ -0.06
SF3A1-204ENST00000447376 PRORSD1PA6NEY8 169 aa14.7□□□□□ -0.06
SF3A1-204ENST00000447376 ETV2O00321 342 aaPredicted RBP14.7□□□□□ -0.06
SF3A1-204ENST00000447376 SYT5O00445 386 aa14.7□□□□□ -0.06
SF3A1-204ENST00000447376 DNAJA2O60884 412 aa14.7□□□□□ -0.06
SF3A1-204ENST00000447376 SMNDC1O75940 238 aaKnown RBP eCLIP14.7□□□□□ -0.06
SF3A1-204ENST00000447376 TFPIP10646 304 aa14.7□□□□□ -0.06
SF3A1-204ENST00000447376 SSTR2P30874 369 aa14.7□□□□□ -0.06
SF3A1-204ENST00000447376 IDH2P48735 452 aaKnown RBP14.7□□□□□ -0.06
SF3A1-204ENST00000447376 MYBPHQ13203 477 aa14.7□□□□□ -0.06
SF3A1-204ENST00000447376 KRT72Q14CN4 511 aa14.7□□□□□ -0.06
SF3A1-204ENST00000447376 ADRM1Q16186 407 aa14.7□□□□□ -0.06
SF3A1-204ENST00000447376 RABL3Q5HYI8 236 aa14.7□□□□□ -0.06
SF3A1-204ENST00000447376 ZNF311Q5JNZ3 666 aa14.7□□□□□ -0.06
SF3A1-204ENST00000447376 RPS26P11Q5JNZ5 115 aaPredicted RBP14.7□□□□□ -0.06
SF3A1-204ENST00000447376 RNF220Q5VTB9 566 aa14.7□□□□□ -0.06
SF3A1-204ENST00000447376 ERICH5Q6P6B1 374 aa14.7□□□□□ -0.06
SF3A1-204ENST00000447376 PLXDC2Q6UX71 529 aa14.7□□□□□ -0.06
SF3A1-204ENST00000447376 PLEKHM3Q6ZWE6 761 aa14.7□□□□□ -0.06
SF3A1-204ENST00000447376 ZNF550Q7Z398 422 aa14.7□□□□□ -0.06
SF3A1-204ENST00000447376 NET1Q7Z628 596 aaPredicted RBP14.7□□□□□ -0.06
SF3A1-204ENST00000447376 BHLHE22Q8NFJ8 381 aaPredicted RBP14.7□□□□□ -0.06
SF3A1-204ENST00000447376 CNOT9Q92600 299 aaKnown RBP14.7□□□□□ -0.06
SF3A1-204ENST00000447376 ZHX1-C8orf76Q96EF9 292 aa14.7□□□□□ -0.06
SF3A1-204ENST00000447376 NPAS1Q99742 590 aa14.7□□□□□ -0.06
SF3A1-204ENST00000447376 TRIM8Q9BZR9 551 aa14.7□□□□□ -0.06
SF3A1-204ENST00000447376 RNF122Q9H9V4 155 aa14.7□□□□□ -0.06
SF3A1-204ENST00000447376 NDE1Q9NXR1 346 aa14.7□□□□□ -0.06
SF3A1-204ENST00000447376 DNAJB12Q9NXW2 375 aaKnown RBP14.7□□□□□ -0.06
SF3A1-204ENST00000447376 SLC13A4Q9UKG4 626 aa14.7□□□□□ -0.06
SF3A1-204ENST00000447376 ZNF443Q9Y2A4 671 aaPredicted RBP14.7□□□□□ -0.06
SF3A1-204ENST00000447376 A0A0J9YW62 118 aa14.69□□□□□ -0.06
SF3A1-204ENST00000447376 CLDN24A6NM45 220 aa14.69□□□□□ -0.06
SF3A1-204ENST00000447376 PCGF2P35227 344 aa14.69□□□□□ -0.06
SF3A1-204ENST00000447376 CSNK2A1P68400 391 aaPredicted RBP14.69□□□□□ -0.06
SF3A1-204ENST00000447376 SIRPAP78324 504 aa14.69□□□□□ -0.06
SF3A1-204ENST00000447376 FOXF2Q12947 444 aa14.69□□□□□ -0.06
SF3A1-204ENST00000447376 RNPS1Q15287 305 aaKnown RBP14.69□□□□□ -0.06
SF3A1-204ENST00000447376 FBXL19-AS1Q494R0 122 aa14.69□□□□□ -0.06
SF3A1-204ENST00000447376 PATL1Q86TB9 770 aaKnown RBP14.69□□□□□ -0.06
SF3A1-204ENST00000447376 LUZP2Q86TE4 346 aa14.69□□□□□ -0.06
SF3A1-204ENST00000447376 VRK2Q86Y07 508 aa14.69□□□□□ -0.06
SF3A1-204ENST00000447376 PTOV1Q86YD1 416 aa14.69□□□□□ -0.06
SF3A1-204ENST00000447376 DMRTC2Q8IXT2 367 aaPredicted RBP14.69□□□□□ -0.06
SF3A1-204ENST00000447376 C10orf111Q8N326 155 aa14.69□□□□□ -0.06
SF3A1-204ENST00000447376 GMPPAQ96IJ6 420 aaPredicted RBP14.69□□□□□ -0.06
SF3A1-204ENST00000447376 ADGRG7Q96K78 797 aa14.69□□□□□ -0.06
SF3A1-204ENST00000447376 OR5B2Q96R09 309 aa14.69□□□□□ -0.06
SF3A1-204ENST00000447376 KLHDC3Q9BQ90 382 aa14.69□□□□□ -0.06
SF3A1-204ENST00000447376 RBM24Q9BX46 236 aaKnown RBP14.69□□□□□ -0.06
SF3A1-204ENST00000447376 NPDC1Q9NQX5 325 aaPredicted RBP14.69□□□□□ -0.06
SF3A1-204ENST00000447376 CHRNA9Q9UGM1 479 aa14.69□□□□□ -0.06
SF3A1-204ENST00000447376 PROCRQ9UNN8 238 aa14.69□□□□□ -0.06
SF3A1-204ENST00000447376 PCNX3Q9H6A9 2034 aa14.69□□□□□ -0.06
SF3A1-204ENST00000447376 CDHR4A6H8M9 788 aa14.68□□□□□ -0.06
SF3A1-204ENST00000447376 FAAHO00519 579 aa14.68□□□□□ -0.06
SF3A1-204ENST00000447376 MSTNO14793 375 aa14.68□□□□□ -0.06
SF3A1-204ENST00000447376 NTN1O95631 604 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms