RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 TRAV25A0A0B4J276 109 aa3.63□□□□□ -1.83
HMGB1P48-201ENST00000446155 NDUFAF8A1L188 74 aa3.63□□□□□ -1.83
HMGB1P48-201ENST00000446155 ZNF749O43361 778 aa3.63□□□□□ -1.83
HMGB1P48-201ENST00000446155 TYROBPO43914 113 aa3.63□□□□□ -1.83
HMGB1P48-201ENST00000446155 FRAT2O75474 233 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P48-201ENST00000446155 H6PDO95479 791 aa3.63□□□□□ -1.83
HMGB1P48-201ENST00000446155 NUDT14O95848 222 aa3.63□□□□□ -1.83
HMGB1P48-201ENST00000446155 FCGR3AP08637 254 aa3.63□□□□□ -1.83
HMGB1P48-201ENST00000446155 GCAP28676 217 aa3.63□□□□□ -1.83
HMGB1P48-201ENST00000446155 CD1BP29016 333 aa3.63□□□□□ -1.83
HMGB1P48-201ENST00000446155 CD1CP29017 333 aa3.63□□□□□ -1.83
HMGB1P48-201ENST00000446155 PPP2R1BP30154 601 aa3.63□□□□□ -1.83
HMGB1P48-201ENST00000446155 OTX1P32242 354 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P48-201ENST00000446155 RDXP35241 583 aaKnown RBP3.63□□□□□ -1.83
HMGB1P48-201ENST00000446155 NAMPTP43490 491 aa3.63□□□□□ -1.83
HMGB1P48-201ENST00000446155 CRYBB1P53674 252 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P48-201ENST00000446155 LAGE3Q14657 143 aa3.63□□□□□ -1.83
HMGB1P48-201ENST00000446155 STK11Q15831 433 aa3.63□□□□□ -1.83
HMGB1P48-201ENST00000446155 PPP1R3AQ16821 1122 aa3.63□□□□□ -1.83
HMGB1P48-201ENST00000446155 UPP1Q16831 310 aa3.63□□□□□ -1.83
HMGB1P48-201ENST00000446155 DCST2Q5T1A1 773 aa3.63□□□□□ -1.83
HMGB1P48-201ENST00000446155 WLSQ5T9L3 541 aa3.63□□□□□ -1.83
HMGB1P48-201ENST00000446155 SEL1L2Q5TEA6 688 aa3.63□□□□□ -1.83
HMGB1P48-201ENST00000446155 BSPRYQ5W0U4 402 aa3.63□□□□□ -1.83
HMGB1P48-201ENST00000446155 OR8G2PQ6IF36 304 aa3.63□□□□□ -1.83
HMGB1P48-201ENST00000446155 FAAP20Q6NZ36 180 aa3.63□□□□□ -1.83
HMGB1P48-201ENST00000446155 TMEM53Q6P2H8 277 aa3.63□□□□□ -1.83
HMGB1P48-201ENST00000446155 TMEM220Q6QAJ8 160 aa3.63□□□□□ -1.83
HMGB1P48-201ENST00000446155 C3P1Q6ZMU1 363 aa3.63□□□□□ -1.83
HMGB1P48-201ENST00000446155 NUFIP2Q7Z417 695 aaKnown RBP3.63□□□□□ -1.83
HMGB1P48-201ENST00000446155 IFNEQ86WN2 208 aa3.63□□□□□ -1.83
HMGB1P48-201ENST00000446155 BPIFB2Q8N4F0 458 aa3.63□□□□□ -1.83
HMGB1P48-201ENST00000446155 SAMD12Q8N8I0 201 aa3.63□□□□□ -1.83
HMGB1P48-201ENST00000446155 DRAXINQ8NBI3 349 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P48-201ENST00000446155 ZNRF1Q8ND25 227 aa3.63□□□□□ -1.83
HMGB1P48-201ENST00000446155 BBS1Q8NFJ9 593 aa3.63□□□□□ -1.83
HMGB1P48-201ENST00000446155 OR52B6Q8NGF0 335 aa3.63□□□□□ -1.83
HMGB1P48-201ENST00000446155 OR8K3Q8NH51 312 aa3.63□□□□□ -1.83
HMGB1P48-201ENST00000446155 SPPL2AQ8TCT8 520 aa3.63□□□□□ -1.83
HMGB1P48-201ENST00000446155 MAGEE2Q8TD90 523 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P48-201ENST00000446155 EFHD2Q96C19 240 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P48-201ENST00000446155 RAB3CQ96E17 227 aa3.63□□□□□ -1.83
HMGB1P48-201ENST00000446155 C19orf60Q96EN9 201 aa3.63□□□□□ -1.83
HMGB1P48-201ENST00000446155 PRRC1Q96M27 445 aa3.63□□□□□ -1.83
HMGB1P48-201ENST00000446155 FMO2Q99518 471 aa3.63□□□□□ -1.83
HMGB1P48-201ENST00000446155 C20orf24Q9BUV8 137 aa3.63□□□□□ -1.83
HMGB1P48-201ENST00000446155 ILKAPQ9H0C8 392 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P48-201ENST00000446155 RNF41Q9H4P4 317 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P48-201ENST00000446155 ANKRD19PQ9H560 264 aa3.63□□□□□ -1.83
HMGB1P48-201ENST00000446155 TDRD3Q9H7E2 651 aaKnown RBP3.63□□□□□ -1.83
HMGB1P48-201ENST00000446155 DEPPQ9NTK1 212 aa3.63□□□□□ -1.83
HMGB1P48-201ENST00000446155 THYN1Q9P016 225 aa3.63□□□□□ -1.83
HMGB1P48-201ENST00000446155 PITPNC1Q9UKF7 332 aa3.63□□□□□ -1.83
HMGB1P48-201ENST00000446155 SCML2Q9UQR0 700 aa3.63□□□□□ -1.83
HMGB1P48-201ENST00000446155 PEX16Q9Y5Y5 336 aa3.63□□□□□ -1.83
HMGB1P48-201ENST00000446155 TMEM94Q12767 1356 aa3.63□□□□□ -1.83
HMGB1P48-201ENST00000446155 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P48-201ENST00000446155 H7C423 109 aa3.62□□□□□ -1.83
HMGB1P48-201ENST00000446155 KIF2AO00139 706 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P48-201ENST00000446155 NDUFS8O00217 210 aa3.62□□□□□ -1.83
HMGB1P48-201ENST00000446155 RS1O15537 224 aa3.62□□□□□ -1.83
HMGB1P48-201ENST00000446155 DPEP1P16444 411 aa3.62□□□□□ -1.83
HMGB1P48-201ENST00000446155 PRKACAP17612 351 aa3.62□□□□□ -1.83
HMGB1P48-201ENST00000446155 PDHA2P29803 388 aa3.62□□□□□ -1.83
HMGB1P48-201ENST00000446155 GNA11P29992 359 aa3.62□□□□□ -1.83
HMGB1P48-201ENST00000446155 STARP49675 285 aa3.62□□□□□ -1.83
HMGB1P48-201ENST00000446155 ACLYP53396 1101 aa3.62□□□□□ -1.83
HMGB1P48-201ENST00000446155 HADHBP55084 474 aaKnown RBP3.62□□□□□ -1.83
HMGB1P48-201ENST00000446155 RPL8P62917 257 aaKnown RBP3.62□□□□□ -1.83
HMGB1P48-201ENST00000446155 CDK16Q00536 496 aa3.62□□□□□ -1.83
HMGB1P48-201ENST00000446155 LIPEQ05469 1076 aa3.62□□□□□ -1.83
HMGB1P48-201ENST00000446155 ZNF33BQ06732 778 aa3.62□□□□□ -1.83
HMGB1P48-201ENST00000446155 ZNF177Q13360 481 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P48-201ENST00000446155 TGFBIQ15582 683 aa3.62□□□□□ -1.83
HMGB1P48-201ENST00000446155 ZIC1Q15915 447 aa3.62□□□□□ -1.83
HMGB1P48-201ENST00000446155 NDUFA9Q16795 377 aa3.62□□□□□ -1.83
HMGB1P48-201ENST00000446155 NKAIN1Q4KMZ8 207 aa3.62□□□□□ -1.83
HMGB1P48-201ENST00000446155 DMRTC1Q5HYR2 192 aa3.62□□□□□ -1.83
HMGB1P48-201ENST00000446155 ACER2Q5QJU3 275 aa3.62□□□□□ -1.83
HMGB1P48-201ENST00000446155 MUC21Q5SSG8 566 aa3.62□□□□□ -1.83
HMGB1P48-201ENST00000446155 C1orf220Q5T0J3 134 aa3.62□□□□□ -1.83
HMGB1P48-201ENST00000446155 PLCXD3Q63HM9 321 aa3.62□□□□□ -1.83
HMGB1P48-201ENST00000446155 ENPP6Q6UWR7 440 aa3.62□□□□□ -1.83
HMGB1P48-201ENST00000446155 FRRS1Q6ZNA5 592 aa3.62□□□□□ -1.83
HMGB1P48-201ENST00000446155 CARM1Q86X55 608 aa3.62□□□□□ -1.83
HMGB1P48-201ENST00000446155 CCDC71Q8IV32 467 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P48-201ENST00000446155 IQCF2Q8IXL9 164 aa3.62□□□□□ -1.83
HMGB1P48-201ENST00000446155 OR7G2Q8NG99 324 aa3.62□□□□□ -1.83
HMGB1P48-201ENST00000446155 OR4D9Q8NGE8 314 aa3.62□□□□□ -1.83
HMGB1P48-201ENST00000446155 OR13F1Q8NGS4 319 aa3.62□□□□□ -1.83
HMGB1P48-201ENST00000446155 C11orf45Q8TAV5 145 aa3.62□□□□□ -1.83
HMGB1P48-201ENST00000446155 FAM110BQ8TC76 370 aa3.62□□□□□ -1.83
HMGB1P48-201ENST00000446155 GLYATL2Q8WU03 294 aa3.62□□□□□ -1.83
HMGB1P48-201ENST00000446155 LRRC39Q96DD0 335 aa3.62□□□□□ -1.83
HMGB1P48-201ENST00000446155 DGCR6LQ9BY27 220 aa3.62□□□□□ -1.83
HMGB1P48-201ENST00000446155 SLITRK2Q9H156 845 aa3.62□□□□□ -1.83
HMGB1P48-201ENST00000446155 BLZF1Q9H2G9 400 aa3.62□□□□□ -1.83
HMGB1P48-201ENST00000446155 GLIPR2Q9H4G4 154 aa3.62□□□□□ -1.83
HMGB1P48-201ENST00000446155 ELL3Q9HB65 397 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P48-201ENST00000446155 NMRAL1Q9HBL8 299 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms