RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 ELOVL5Q9NYP7 299 aa13.17□□□□□ -0.3
USE1-202ENST00000445667 SLC25A37Q9NYZ2 338 aa13.17□□□□□ -0.3
USE1-202ENST00000445667 MPDZO75970 2070 aa13.17□□□□□ -0.3
USE1-202ENST00000445667 POLQO75417 2590 aa13.17□□□□□ -0.3
USE1-202ENST00000445667 A0A096LPI6 279 aa13.16□□□□□ -0.3
USE1-202ENST00000445667 C16orf97H3BN30 126 aa13.16□□□□□ -0.3
USE1-202ENST00000445667 CASKO14936 926 aa13.16□□□□□ -0.3
USE1-202ENST00000445667 PRKD3O94806 890 aa13.16□□□□□ -0.3
USE1-202ENST00000445667 PABPC4LP0CB38 370 aaKnown RBP13.16□□□□□ -0.3
USE1-202ENST00000445667 CCNA2P20248 432 aa13.16□□□□□ -0.3
USE1-202ENST00000445667 AGTR1P30556 359 aa13.16□□□□□ -0.3
USE1-202ENST00000445667 DNAJA1P31689 397 aaKnown RBP13.16□□□□□ -0.3
USE1-202ENST00000445667 CCKARP32238 428 aa13.16□□□□□ -0.3
USE1-202ENST00000445667 UGT2B10P36537 528 aa13.16□□□□□ -0.3
USE1-202ENST00000445667 APOBEC1P41238 236 aaKnown RBP13.16□□□□□ -0.3
USE1-202ENST00000445667 CRISP3P54108 245 aa13.16□□□□□ -0.3
USE1-202ENST00000445667 RAC3P60763 192 aa13.16□□□□□ -0.3
USE1-202ENST00000445667 ZNF550Q7Z398 422 aa13.16□□□□□ -0.3
USE1-202ENST00000445667 NUFIP2Q7Z417 695 aaKnown RBP13.16□□□□□ -0.3
USE1-202ENST00000445667 ADGRG3Q86Y34 549 aa13.16□□□□□ -0.3
USE1-202ENST00000445667 MSRB3Q8IXL7 192 aa13.16□□□□□ -0.3
USE1-202ENST00000445667 OR52P1PQ8NH57 321 aa13.16□□□□□ -0.3
USE1-202ENST00000445667 PMM1Q92871 262 aa13.16□□□□□ -0.3
USE1-202ENST00000445667 MAL2Q969L2 176 aa13.16□□□□□ -0.3
USE1-202ENST00000445667 TMEM19Q96HH6 336 aa13.16□□□□□ -0.3
USE1-202ENST00000445667 NPHS2Q9NP85 383 aa13.16□□□□□ -0.3
USE1-202ENST00000445667 CALML5Q9NZT1 146 aa13.16□□□□□ -0.3
USE1-202ENST00000445667 TESMINQ9Y4I5 508 aa13.16□□□□□ -0.3
USE1-202ENST00000445667 OTOGQ6ZRI0 2925 aa13.15□□□□□ -0.3
USE1-202ENST00000445667 GKN3PP0CG01 181 aa13.15□□□□□ -0.3
USE1-202ENST00000445667 TFPIP10646 304 aa13.15□□□□□ -0.3
USE1-202ENST00000445667 PCYT1AP49585 367 aa13.15□□□□□ -0.3
USE1-202ENST00000445667 DIO1P49895 249 aa13.15□□□□□ -0.3
USE1-202ENST00000445667 ATP4BP51164 291 aa13.15□□□□□ -0.3
USE1-202ENST00000445667 GNA13Q14344 377 aa13.15□□□□□ -0.3
USE1-202ENST00000445667 SQLEQ14534 574 aa13.15□□□□□ -0.3
USE1-202ENST00000445667 RNPS1Q15287 305 aaKnown RBP13.15□□□□□ -0.3
USE1-202ENST00000445667 SYT14P1Q58G82 188 aa13.15□□□□□ -0.3
USE1-202ENST00000445667 TMEM201Q5SNT2 666 aa13.15□□□□□ -0.3
USE1-202ENST00000445667 LRIF1Q5T3J3 769 aa13.15□□□□□ -0.3
USE1-202ENST00000445667 ZNF836Q6ZNA1 936 aa13.15□□□□□ -0.3
USE1-202ENST00000445667 TMPPEQ6ZT21 453 aa13.15□□□□□ -0.3
USE1-202ENST00000445667 C22orf34Q6ZV56 151 aa13.15□□□□□ -0.3
USE1-202ENST00000445667 GRINAQ7Z429 371 aa13.15□□□□□ -0.3
USE1-202ENST00000445667 ZNF775Q96BV0 537 aaPredicted RBP13.15□□□□□ -0.3
USE1-202ENST00000445667 ZC3HAV1LQ96H79 300 aaKnown RBP13.15□□□□□ -0.3
USE1-202ENST00000445667 ARL5BQ96KC2 179 aa13.15□□□□□ -0.3
USE1-202ENST00000445667 MED18Q9BUE0 208 aa13.15□□□□□ -0.3
USE1-202ENST00000445667 OR11A1Q9GZK7 315 aa13.15□□□□□ -0.3
USE1-202ENST00000445667 VAPAQ9P0L0 249 aa13.15□□□□□ -0.3
USE1-202ENST00000445667 CHRNA9Q9UGM1 479 aa13.15□□□□□ -0.3
USE1-202ENST00000445667 DSPPQ9NZW4 1301 aa13.14□□□□□ -0.31
USE1-202ENST00000445667 MYO9AB2RTY4 2548 aa13.14□□□□□ -0.31
USE1-202ENST00000445667 TMED7-TICAM2A0A0A6YYA0 188 aa13.14□□□□□ -0.31
USE1-202ENST00000445667 A0A0G2JND7 137 aa13.14□□□□□ -0.31
USE1-202ENST00000445667 A0A0G2JPF8 293 aa13.14□□□□□ -0.31
USE1-202ENST00000445667 TMEM247A6NEH6 219 aa13.14□□□□□ -0.31
USE1-202ENST00000445667 CFAP73A6NFT4 308 aa13.14□□□□□ -0.31
USE1-202ENST00000445667 HNRNPCL2B2RXH8 293 aa13.14□□□□□ -0.31
USE1-202ENST00000445667 HNRNPCL3B7ZW38 293 aa13.14□□□□□ -0.31
USE1-202ENST00000445667 SULT2B1O00204 365 aa13.14□□□□□ -0.31
USE1-202ENST00000445667 SMAD9O15198 467 aaKnown RBP13.14□□□□□ -0.31
USE1-202ENST00000445667 HNRNPCL1O60812 293 aaKnown RBP13.14□□□□□ -0.31
USE1-202ENST00000445667 HRGP04196 525 aa13.14□□□□□ -0.31
USE1-202ENST00000445667 YES1P07947 543 aa13.14□□□□□ -0.31
USE1-202ENST00000445667 HNRNPCL4P0DMR1 293 aa13.14□□□□□ -0.31
USE1-202ENST00000445667 EPS8Q12929 822 aa13.14□□□□□ -0.31
USE1-202ENST00000445667 FADDQ13158 208 aa13.14□□□□□ -0.31
USE1-202ENST00000445667 STAC2Q6ZMT1 411 aa13.14□□□□□ -0.31
USE1-202ENST00000445667 C10orf111Q8N326 155 aa13.14□□□□□ -0.31
USE1-202ENST00000445667 SLC43A2Q8N370 569 aa13.14□□□□□ -0.31
USE1-202ENST00000445667 CLIP4Q8N3C7 705 aa13.14□□□□□ -0.31
USE1-202ENST00000445667 SLC25A43Q8WUT9 341 aaPredicted RBP13.14□□□□□ -0.31
USE1-202ENST00000445667 RAD21L1Q9H4I0 556 aa13.14□□□□□ -0.31
USE1-202ENST00000445667 THUMPD1Q9NXG2 353 aaKnown RBP13.14□□□□□ -0.31
USE1-202ENST00000445667 C6orf203Q9P0P8 240 aaPredicted RBP13.14□□□□□ -0.31
USE1-202ENST00000445667 KLHL13Q9P2N7 655 aa13.14□□□□□ -0.31
USE1-202ENST00000445667 OSGIN1Q9UJX0 560 aa13.14□□□□□ -0.31
USE1-202ENST00000445667 ING1Q9UK53 422 aaPredicted RBP13.14□□□□□ -0.31
USE1-202ENST00000445667 ZNF443Q9Y2A4 671 aaPredicted RBP13.14□□□□□ -0.31
USE1-202ENST00000445667 TMED7Q9Y3B3 224 aa13.14□□□□□ -0.31
USE1-202ENST00000445667 A0A1W2PPR1 153 aa13.13□□□□□ -0.31
USE1-202ENST00000445667 TMEM72A0PK05 275 aa13.13□□□□□ -0.31
USE1-202ENST00000445667 CDHR4A6H8M9 788 aa13.13□□□□□ -0.31
USE1-202ENST00000445667 SIAH2O43255 324 aa13.13□□□□□ -0.31
USE1-202ENST00000445667 FESP07332 822 aa13.13□□□□□ -0.31
USE1-202ENST00000445667 BMP2P12643 396 aa13.13□□□□□ -0.31
USE1-202ENST00000445667 PRG2P13727 222 aa13.13□□□□□ -0.31
USE1-202ENST00000445667 TACR3P29371 465 aa13.13□□□□□ -0.31
USE1-202ENST00000445667 ACAA2P42765 397 aaKnown RBP13.13□□□□□ -0.31
USE1-202ENST00000445667 SLC1A3P43003 542 aa13.13□□□□□ -0.31
USE1-202ENST00000445667 IST1P53990 364 aa13.13□□□□□ -0.31
USE1-202ENST00000445667 RASGEF1BQ0VAM2 473 aa13.13□□□□□ -0.31
USE1-202ENST00000445667 SF3A3Q12874 501 aaKnown RBP eCLIP13.13□□□□□ -0.31
USE1-202ENST00000445667 TESK1Q15569 626 aa13.13□□□□□ -0.31
USE1-202ENST00000445667 LIN52Q52LA3 116 aa13.13□□□□□ -0.31
USE1-202ENST00000445667 BEND4Q6ZU67 534 aa13.13□□□□□ -0.31
USE1-202ENST00000445667 STK32CQ86UX6 486 aa13.13□□□□□ -0.31
USE1-202ENST00000445667 ZNF300Q96RE9 604 aaPredicted RBP13.13□□□□□ -0.31
USE1-202ENST00000445667 PSD2Q9BQI7 771 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 136.9 ms