RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 IL23AQ9NPF7 189 aa17.45■□□□□ 0.38
SHANK3-203ENST00000445220 MED17Q9NVC6 651 aa17.45■□□□□ 0.38
SHANK3-203ENST00000445220 FBXO7Q9Y3I1 522 aa17.45■□□□□ 0.38
SHANK3-203ENST00000445220 A0A087WZY1 265 aa17.45■□□□□ 0.38
SHANK3-203ENST00000445220 FRS3O43559 492 aa17.45■□□□□ 0.38
SHANK3-203ENST00000445220 RAB4AP20338 218 aa17.45■□□□□ 0.38
SHANK3-203ENST00000445220 EIF2B1Q14232 305 aaKnown RBP17.45■□□□□ 0.38
SHANK3-203ENST00000445220 FAM180BQ6P0A1 224 aa17.45■□□□□ 0.38
SHANK3-203ENST00000445220 GPR26Q8NDV2 337 aa17.45■□□□□ 0.38
SHANK3-203ENST00000445220 OR52H1Q8NGJ2 320 aa17.45■□□□□ 0.38
SHANK3-203ENST00000445220 DNAJA3Q96EY1 480 aa17.45■□□□□ 0.38
SHANK3-203ENST00000445220 SERPINE2P07093 398 aa17.45■□□□□ 0.38
SHANK3-203ENST00000445220 SPINT3P49223 89 aa17.45■□□□□ 0.38
SHANK3-203ENST00000445220 TMEM164Q5U3C3 297 aa17.45■□□□□ 0.38
SHANK3-203ENST00000445220 CARD17Q5XLA6 110 aa17.45■□□□□ 0.38
SHANK3-203ENST00000445220 TIGD3Q6B0B8 471 aa17.45■□□□□ 0.38
SHANK3-203ENST00000445220 H3F3CQ6NXT2 135 aa17.45■□□□□ 0.38
SHANK3-203ENST00000445220 ZNF705AQ6ZN79 300 aaPredicted RBP17.45■□□□□ 0.38
SHANK3-203ENST00000445220 BADQ92934 168 aa17.45■□□□□ 0.38
SHANK3-203ENST00000445220 MMABQ96EY8 250 aaPredicted RBP17.45■□□□□ 0.38
SHANK3-203ENST00000445220 SFXN2Q96NB2 322 aa17.45■□□□□ 0.38
SHANK3-203ENST00000445220 TAS2R16Q9NYV7 291 aa17.45■□□□□ 0.38
SHANK3-203ENST00000445220 DKKL1Q9UK85 242 aa17.45■□□□□ 0.38
SHANK3-203ENST00000445220 PLEKHM1Q9Y4G2 1056 aa17.45■□□□□ 0.38
SHANK3-203ENST00000445220 MYADML2A6NDP7 307 aa17.44■□□□□ 0.38
SHANK3-203ENST00000445220 RNH1P13489 461 aaKnown RBP17.44■□□□□ 0.38
SHANK3-203ENST00000445220 FUT1P19526 365 aa17.44■□□□□ 0.38
SHANK3-203ENST00000445220 PSPHP78330 225 aa17.44■□□□□ 0.38
SHANK3-203ENST00000445220 RAB31Q13636 194 aa17.44■□□□□ 0.38
SHANK3-203ENST00000445220 MEX3DQ86XN8 651 aaKnown RBP17.44■□□□□ 0.38
SHANK3-203ENST00000445220 ACVR1CQ8NER5 493 aa17.44■□□□□ 0.38
SHANK3-203ENST00000445220 RAB39BQ96DA2 213 aa17.44■□□□□ 0.38
SHANK3-203ENST00000445220 CPED1A4D0V7 1026 aa17.44■□□□□ 0.38
SHANK3-203ENST00000445220 FAM183AA6NL82 134 aa17.44■□□□□ 0.38
SHANK3-203ENST00000445220 TMEM189-UBE2V1I3L0A0 370 aa17.44■□□□□ 0.38
SHANK3-203ENST00000445220 HTR3BO95264 441 aa17.44■□□□□ 0.38
SHANK3-203ENST00000445220 S100A8P05109 93 aa17.44■□□□□ 0.38
SHANK3-203ENST00000445220 DHPSP49366 369 aaPredicted RBP17.44■□□□□ 0.38
SHANK3-203ENST00000445220 POLR2HP52434 150 aaKnown RBP17.44■□□□□ 0.38
SHANK3-203ENST00000445220 PDZK1IP1Q13113 114 aa17.44■□□□□ 0.38
SHANK3-203ENST00000445220 LEXMQ3ZCV2 418 aa17.44■□□□□ 0.38
SHANK3-203ENST00000445220 ZNF322Q6U7Q0 402 aaPredicted RBP17.44■□□□□ 0.38
SHANK3-203ENST00000445220 MEX3BQ6ZN04 569 aaKnown RBP17.44■□□□□ 0.38
SHANK3-203ENST00000445220 ISL2Q96A47 359 aa17.44■□□□□ 0.38
SHANK3-203ENST00000445220 BPIFA2Q96DR5 249 aa17.44■□□□□ 0.38
SHANK3-203ENST00000445220 WASH4PA8MWX3 477 aa17.44■□□□□ 0.38
SHANK3-203ENST00000445220 RAD1O60671 282 aa17.44■□□□□ 0.38
SHANK3-203ENST00000445220 GASTP01350 101 aa17.44■□□□□ 0.38
SHANK3-203ENST00000445220 CRABP1P29762 137 aa17.44■□□□□ 0.38
SHANK3-203ENST00000445220 HCCSP53701 268 aa17.44■□□□□ 0.38
SHANK3-203ENST00000445220 SLC14A1Q13336 389 aa17.44■□□□□ 0.38
SHANK3-203ENST00000445220 SLX4IPQ5VYV7 408 aa17.44■□□□□ 0.38
SHANK3-203ENST00000445220 TMUB2Q71RG4 321 aa17.44■□□□□ 0.38
SHANK3-203ENST00000445220 CBARPQ8N350 705 aaPredicted RBP17.44■□□□□ 0.38
SHANK3-203ENST00000445220 BTF3L4Q96K17 158 aa17.44■□□□□ 0.38
SHANK3-203ENST00000445220 DMRT3Q9NQL9 472 aa17.44■□□□□ 0.38
SHANK3-203ENST00000445220 PLEKHJ1Q9NW61 149 aa17.44■□□□□ 0.38
SHANK3-203ENST00000445220 ZNF281Q9Y2X9 895 aa17.44■□□□□ 0.38
SHANK3-203ENST00000445220 MYH13Q9UKX3 1938 aa17.44■□□□□ 0.38
SHANK3-203ENST00000445220 EPHA1P21709 976 aa17.44■□□□□ 0.38
SHANK3-203ENST00000445220 PIGAP37287 484 aa17.44■□□□□ 0.38
SHANK3-203ENST00000445220 TMEM244Q5VVB8 128 aa17.44■□□□□ 0.38
SHANK3-203ENST00000445220 VASNQ6EMK4 673 aa17.44■□□□□ 0.38
SHANK3-203ENST00000445220 OR4N5Q8IXE1 308 aa17.44■□□□□ 0.38
SHANK3-203ENST00000445220 LMX1AQ8TE12 382 aa17.44■□□□□ 0.38
SHANK3-203ENST00000445220 HOXD1Q9GZZ0 328 aa17.44■□□□□ 0.38
SHANK3-203ENST00000445220 C20orf85Q9H1P6 137 aa17.44■□□□□ 0.38
SHANK3-203ENST00000445220 ACKR4Q9NPB9 350 aa17.44■□□□□ 0.38
SHANK3-203ENST00000445220 HRASLS2Q9NWW9 162 aa17.44■□□□□ 0.38
SHANK3-203ENST00000445220 ATXN7L1Q9ULK2 861 aaPredicted RBP17.44■□□□□ 0.38
SHANK3-203ENST00000445220 RHBDD3Q9Y3P4 386 aa17.44■□□□□ 0.38
SHANK3-203ENST00000445220 CSO75390 466 aaKnown RBP17.43■□□□□ 0.38
SHANK3-203ENST00000445220 CFIP05156 583 aa17.43■□□□□ 0.38
SHANK3-203ENST00000445220 CSF2RAP15509 400 aa17.43■□□□□ 0.38
SHANK3-203ENST00000445220 NME2P22392 152 aa17.43■□□□□ 0.38
SHANK3-203ENST00000445220 RNF111Q6ZNA4 994 aa17.43■□□□□ 0.38
SHANK3-203ENST00000445220 SLC2A12Q8TD20 617 aa17.43■□□□□ 0.38
SHANK3-203ENST00000445220 INTS14Q96SY0 518 aa17.43■□□□□ 0.38
SHANK3-203ENST00000445220 J3KTA2 159 aa17.43■□□□□ 0.38
SHANK3-203ENST00000445220 GPR137BO60478 399 aa17.43■□□□□ 0.38
SHANK3-203ENST00000445220 RAF1P04049 648 aa17.43■□□□□ 0.38
SHANK3-203ENST00000445220 KLK3P07288 261 aaPredicted RBP17.43■□□□□ 0.38
SHANK3-203ENST00000445220 SIM1P81133 766 aaPredicted RBP17.43■□□□□ 0.38
SHANK3-203ENST00000445220 TSPAN31Q12999 210 aa17.43■□□□□ 0.38
SHANK3-203ENST00000445220 NLRP8Q86W28 1048 aa17.43■□□□□ 0.38
SHANK3-203ENST00000445220 ANKRD53Q8N9V6 530 aa17.43■□□□□ 0.38
SHANK3-203ENST00000445220 OR10Z1Q8NGY1 313 aa17.43■□□□□ 0.38
SHANK3-203ENST00000445220 MZB1Q8WU39 189 aa17.43■□□□□ 0.38
SHANK3-203ENST00000445220 TAAR8Q969N4 342 aa17.43■□□□□ 0.38
SHANK3-203ENST00000445220 SEC22AQ96IW7 307 aa17.43■□□□□ 0.38
SHANK3-203ENST00000445220 RLIMQ9NVW2 624 aa17.43■□□□□ 0.38
SHANK3-203ENST00000445220 IL17CQ9P0M4 197 aa17.43■□□□□ 0.38
SHANK3-203ENST00000445220 HHLA2Q9UM44 414 aa17.43■□□□□ 0.38
SHANK3-203ENST00000445220 CBY1Q9Y3M2 126 aa17.43■□□□□ 0.38
SHANK3-203ENST00000445220 CDC123O75794 336 aaPredicted RBP17.43■□□□□ 0.38
SHANK3-203ENST00000445220 STK17BO94768 372 aa17.43■□□□□ 0.38
SHANK3-203ENST00000445220 HNRNPKP61978 463 aaKnown RBP eCLIP17.43■□□□□ 0.386e-7■■■■□ 25.3
SHANK3-203ENST00000445220 GPLD1P80108 840 aa17.43■□□□□ 0.38
SHANK3-203ENST00000445220 KIAA0141Q14154 515 aaPredicted RBP17.43■□□□□ 0.38
SHANK3-203ENST00000445220 ELOCQ15369 112 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms