RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 TEX13BQ9BXU2 312 aa3.37□□□□□ -1.87
HMGB3P6-201ENST00000444896 CAPS2Q9BXY5 557 aa3.37□□□□□ -1.87
HMGB3P6-201ENST00000444896 POLD4Q9HCU8 107 aa3.37□□□□□ -1.87
HMGB3P6-201ENST00000444896 FAM120CQ9NX05 1096 aaKnown RBP3.37□□□□□ -1.87
HMGB3P6-201ENST00000444896 WRAP73Q9P2S5 460 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P6-201ENST00000444896 UVRAGQ9P2Y5 699 aa3.37□□□□□ -1.87
HMGB3P6-201ENST00000444896 PRODH2Q9UF12 536 aa3.37□□□□□ -1.87
HMGB3P6-201ENST00000444896 Q9UF83 564 aa3.37□□□□□ -1.87
HMGB3P6-201ENST00000444896 FZR1Q9UM11 496 aa3.37□□□□□ -1.87
HMGB3P6-201ENST00000444896 PLEKHA6Q9Y2H5 1048 aa3.37□□□□□ -1.87
HMGB3P6-201ENST00000444896 IGSF9BQ9UPX0 1349 aa3.37□□□□□ -1.87
HMGB3P6-201ENST00000444896 PARP14Q460N5 1801 aa3.36□□□□□ -1.87
HMGB3P6-201ENST00000444896 IGLV3-10A0A075B6K4 115 aa3.36□□□□□ -1.87
HMGB3P6-201ENST00000444896 LRIT2A6NDA9 550 aa3.36□□□□□ -1.87
HMGB3P6-201ENST00000444896 TMEM110-MUSTN1A8MSY1 372 aa3.36□□□□□ -1.87
HMGB3P6-201ENST00000444896 EIF3HO15372 352 aaKnown RBP eCLIP3.36□□□□□ -1.87
HMGB3P6-201ENST00000444896 SPOPO43791 374 aa3.36□□□□□ -1.87
HMGB3P6-201ENST00000444896 SHOX2O60902 331 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P6-201ENST00000444896 GJB5O95377 273 aa3.36□□□□□ -1.87
HMGB3P6-201ENST00000444896 PRAMEF12O95522 483 aa3.36□□□□□ -1.87
HMGB3P6-201ENST00000444896 PRDX2P32119 198 aa3.36□□□□□ -1.87
HMGB3P6-201ENST00000444896 RFC2P35250 354 aa3.36□□□□□ -1.87
HMGB3P6-201ENST00000444896 FNTAP49354 379 aa3.36□□□□□ -1.87
HMGB3P6-201ENST00000444896 NUMBP49757 651 aa3.36□□□□□ -1.87
HMGB3P6-201ENST00000444896 KRTAP10-3P60369 221 aa3.36□□□□□ -1.87
HMGB3P6-201ENST00000444896 GNGT1P63211 74 aa3.36□□□□□ -1.87
HMGB3P6-201ENST00000444896 MRPS25P82663 173 aaKnown RBP3.36□□□□□ -1.87
HMGB3P6-201ENST00000444896 PRKCEQ02156 737 aa3.36□□□□□ -1.87
HMGB3P6-201ENST00000444896 MAP2K1Q02750 393 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P6-201ENST00000444896 CYP24A1Q07973 514 aa3.36□□□□□ -1.87
HMGB3P6-201ENST00000444896 IFFO1Q0D2I5 559 aa3.36□□□□□ -1.87
HMGB3P6-201ENST00000444896 SPP2Q13103 211 aa3.36□□□□□ -1.87
HMGB3P6-201ENST00000444896 TGIF1Q15583 401 aa3.36□□□□□ -1.87
HMGB3P6-201ENST00000444896 ZIC1Q15915 447 aa3.36□□□□□ -1.87
HMGB3P6-201ENST00000444896 PKN2Q16513 984 aaKnown RBP3.36□□□□□ -1.87
HMGB3P6-201ENST00000444896 MICAQ29983 383 aa3.36□□□□□ -1.87
HMGB3P6-201ENST00000444896 UTF1Q5T230 341 aa3.36□□□□□ -1.87
HMGB3P6-201ENST00000444896 AGBL2Q5U5Z8 902 aa3.36□□□□□ -1.87
HMGB3P6-201ENST00000444896 IL23RQ5VWK5 629 aa3.36□□□□□ -1.87
HMGB3P6-201ENST00000444896 KDM7AQ6ZMT4 941 aa3.36□□□□□ -1.87
HMGB3P6-201ENST00000444896 GCNT7Q6ZNI0 430 aa3.36□□□□□ -1.87
HMGB3P6-201ENST00000444896 EFCAB13Q8IY85 973 aa3.36□□□□□ -1.87
HMGB3P6-201ENST00000444896 FAM71AQ8IYT1 594 aa3.36□□□□□ -1.87
HMGB3P6-201ENST00000444896 ZNF619Q8N2I2 560 aa3.36□□□□□ -1.87
HMGB3P6-201ENST00000444896 MRPL43Q8N983 215 aaKnown RBP3.36□□□□□ -1.87
HMGB3P6-201ENST00000444896 MINDY2Q8NBR6 621 aa3.36□□□□□ -1.87
HMGB3P6-201ENST00000444896 TMEM161BQ8NDZ6 487 aa3.36□□□□□ -1.87
HMGB3P6-201ENST00000444896 WDR36Q8NI36 951 aaKnown RBP3.36□□□□□ -1.87
HMGB3P6-201ENST00000444896 SHC3Q92529 594 aa3.36□□□□□ -1.87
HMGB3P6-201ENST00000444896 DNAJA3Q96EY1 480 aa3.36□□□□□ -1.87
HMGB3P6-201ENST00000444896 C11orf24Q96F05 449 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P6-201ENST00000444896 ATP6V1G3Q96LB4 118 aa3.36□□□□□ -1.87
HMGB3P6-201ENST00000444896 C9orf85Q96MD7 179 aa3.36□□□□□ -1.87
HMGB3P6-201ENST00000444896 ZIM3Q96PE6 472 aa3.36□□□□□ -1.87
HMGB3P6-201ENST00000444896 FMO2Q99518 471 aa3.36□□□□□ -1.87
HMGB3P6-201ENST00000444896 NACA2Q9H009 215 aa3.36□□□□□ -1.87
HMGB3P6-201ENST00000444896 TMEM117Q9H0C3 514 aa3.36□□□□□ -1.87
HMGB3P6-201ENST00000444896 STMN4Q9H169 189 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P6-201ENST00000444896 POLR3FQ9H1D9 316 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P6-201ENST00000444896 GOLPH3Q9H4A6 298 aa3.36□□□□□ -1.87
HMGB3P6-201ENST00000444896 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.36□□□□□ -1.87
HMGB3P6-201ENST00000444896 RAB20Q9NX57 234 aa3.36□□□□□ -1.87
HMGB3P6-201ENST00000444896 IMPAD1Q9NX62 359 aa3.36□□□□□ -1.87
HMGB3P6-201ENST00000444896 HOXC10Q9NYD6 342 aa3.36□□□□□ -1.87
HMGB3P6-201ENST00000444896 MTRF1LQ9UGC7 380 aaKnown RBP3.36□□□□□ -1.87
HMGB3P6-201ENST00000444896 LCMT1Q9UIC8 334 aa3.36□□□□□ -1.87
HMGB3P6-201ENST00000444896 LOC285556D6RIA3 1793 aa3.35□□□□□ -1.87
HMGB3P6-201ENST00000444896 BRCA1P38398 1863 aaKnown RBP3.35□□□□□ -1.87
HMGB3P6-201ENST00000444896 SSC5DA1L4H1 1573 aa3.35□□□□□ -1.87
HMGB3P6-201ENST00000444896 FAM168BA1KXE4 195 aa3.35□□□□□ -1.87
HMGB3P6-201ENST00000444896 GOLGA8IPA6NC78 632 aa3.35□□□□□ -1.87
HMGB3P6-201ENST00000444896 ZNF233A6NK53 670 aa3.35□□□□□ -1.87
HMGB3P6-201ENST00000444896 GOLGA8JA6NMD2 632 aa3.35□□□□□ -1.87
HMGB3P6-201ENST00000444896 NPIPA2E9PIF3 369 aa3.35□□□□□ -1.87
HMGB3P6-201ENST00000444896 NDUFAB1O14561 156 aa3.35□□□□□ -1.87
HMGB3P6-201ENST00000444896 NDC80O14777 642 aa3.35□□□□□ -1.87
HMGB3P6-201ENST00000444896 KIAA0754O94854 1291 aa3.35□□□□□ -1.87
HMGB3P6-201ENST00000444896 CCNE2O96020 404 aa3.35□□□□□ -1.87
HMGB3P6-201ENST00000444896 MT-ATP6P00846 226 aa3.35□□□□□ -1.87
HMGB3P6-201ENST00000444896 TGFAP01135 160 aa3.35□□□□□ -1.87
HMGB3P6-201ENST00000444896 TNNI1P19237 187 aa3.35□□□□□ -1.87
HMGB3P6-201ENST00000444896 IDSP22304 550 aa3.35□□□□□ -1.87
HMGB3P6-201ENST00000444896 PTPN6P29350 595 aa3.35□□□□□ -1.87
HMGB3P6-201ENST00000444896 SLC1A1P43005 524 aa3.35□□□□□ -1.87
HMGB3P6-201ENST00000444896 NAMPTP43490 491 aa3.35□□□□□ -1.87
HMGB3P6-201ENST00000444896 RABIFP47224 123 aa3.35□□□□□ -1.87
HMGB3P6-201ENST00000444896 OR1D4P47884 311 aa3.35□□□□□ -1.87
HMGB3P6-201ENST00000444896 ARHGDIBP52566 201 aa3.35□□□□□ -1.87
HMGB3P6-201ENST00000444896 AP3M2P53677 418 aa3.35□□□□□ -1.87
HMGB3P6-201ENST00000444896 ATXN3P54252 364 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P6-201ENST00000444896 RWDD2BP57060 319 aa3.35□□□□□ -1.87
HMGB3P6-201ENST00000444896 PPIAP62937 165 aaKnown RBP3.35□□□□□ -1.87
HMGB3P6-201ENST00000444896 DR1Q01658 176 aa3.35□□□□□ -1.87
HMGB3P6-201ENST00000444896 SP4Q02446 784 aa3.35□□□□□ -1.87
HMGB3P6-201ENST00000444896 MESDQ14696 234 aa3.35□□□□□ -1.87
HMGB3P6-201ENST00000444896 PARP6Q2NL67 630 aa3.35□□□□□ -1.87
HMGB3P6-201ENST00000444896 TTMPQ5BVD1 217 aa3.35□□□□□ -1.87
HMGB3P6-201ENST00000444896 DNAJC21Q5F1R6 531 aaKnown RBP3.35□□□□□ -1.87
HMGB3P6-201ENST00000444896 LIN9Q5TKA1 542 aa3.35□□□□□ -1.87
HMGB3P6-201ENST00000444896 LEG1Q6P5S2 330 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms