RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 WDPCPO95876 746 aa18.79■□□□□ 0.6
SHOX2-203ENST00000441443 CTSLP07711 333 aa18.79■□□□□ 0.6
SHOX2-203ENST00000441443 ELFN1P0C7U0 828 aa18.79■□□□□ 0.6
SHOX2-203ENST00000441443 AKR1D1P51857 326 aa18.79■□□□□ 0.6
SHOX2-203ENST00000441443 UBE2MP61081 183 aaKnown RBP18.79■□□□□ 0.6
SHOX2-203ENST00000441443 RAP2BP61225 183 aa18.79■□□□□ 0.6
SHOX2-203ENST00000441443 ZNF85Q03923 595 aa18.79■□□□□ 0.6
SHOX2-203ENST00000441443 HES5Q5TA89 166 aa18.79■□□□□ 0.6
SHOX2-203ENST00000441443 RELL2Q8NC24 303 aaPredicted RBP18.79■□□□□ 0.6
SHOX2-203ENST00000441443 LILRB1Q8NHL6 650 aaPredicted RBP18.79■□□□□ 0.6
SHOX2-203ENST00000441443 MRPS24Q96EL2 167 aaKnown RBP18.79■□□□□ 0.6
SHOX2-203ENST00000441443 PELOQ9BRX2 385 aaKnown RBP18.79■□□□□ 0.6
SHOX2-203ENST00000441443 EVA1AQ9H8M9 152 aa18.79■□□□□ 0.6
SHOX2-203ENST00000441443 OR2M5A3KFT3 312 aa18.78■□□□□ 0.6
SHOX2-203ENST00000441443 CREBL2O60519 120 aaPredicted RBP18.78■□□□□ 0.6
SHOX2-203ENST00000441443 GABRA1P14867 456 aa18.78■□□□□ 0.6
SHOX2-203ENST00000441443 IFNGR1P15260 489 aa18.78■□□□□ 0.6
SHOX2-203ENST00000441443 EPCAMP16422 314 aa18.78■□□□□ 0.6
SHOX2-203ENST00000441443 CTNNB1P35222 781 aa18.78■□□□□ 0.6
SHOX2-203ENST00000441443 RPL35P42766 123 aaKnown RBP18.78■□□□□ 0.6
SHOX2-203ENST00000441443 MESP2Q0VG99 397 aa18.78■□□□□ 0.6
SHOX2-203ENST00000441443 TP53I3Q53FA7 332 aa18.78■□□□□ 0.6
SHOX2-203ENST00000441443 PDZD9Q8IXQ8 264 aa18.78■□□□□ 0.6
SHOX2-203ENST00000441443 SPICQ8N5J4 248 aa18.78■□□□□ 0.6
SHOX2-203ENST00000441443 CLRN3Q8NCR9 226 aa18.78■□□□□ 0.6
SHOX2-203ENST00000441443 GINS4Q9BRT9 223 aa18.78■□□□□ 0.6
SHOX2-203ENST00000441443 KNL1Q8NG31 2342 aa18.78■□□□□ 0.6
SHOX2-203ENST00000441443 OR1F1O43749 312 aa18.78■□□□□ 0.6
SHOX2-203ENST00000441443 SDC3O75056 442 aa18.78■□□□□ 0.6
SHOX2-203ENST00000441443 SPDEFO95238 335 aa18.78■□□□□ 0.6
SHOX2-203ENST00000441443 IL9P15248 144 aa18.78■□□□□ 0.6
SHOX2-203ENST00000441443 TEAD1P28347 426 aa18.78■□□□□ 0.6
SHOX2-203ENST00000441443 MAPK14Q16539 360 aa18.78■□□□□ 0.6
SHOX2-203ENST00000441443 TCEAL5Q5H9L2 206 aa18.78■□□□□ 0.6
SHOX2-203ENST00000441443 OR5M1Q8NGP8 315 aa18.78■□□□□ 0.6
SHOX2-203ENST00000441443 FANK1Q8TC84 345 aa18.78■□□□□ 0.6
SHOX2-203ENST00000441443 SETD7Q8WTS6 366 aaKnown RBP18.78■□□□□ 0.6
SHOX2-203ENST00000441443 ATOH1Q92858 354 aaPredicted RBP18.78■□□□□ 0.6
SHOX2-203ENST00000441443 OR7D2Q96RA2 312 aa18.78■□□□□ 0.6
SHOX2-203ENST00000441443 AIF1LQ9BQI0 150 aa18.78■□□□□ 0.6
SHOX2-203ENST00000441443 ZDHHC5Q9C0B5 715 aa18.78■□□□□ 0.6
SHOX2-203ENST00000441443 ANKRD19PQ9H560 264 aa18.78■□□□□ 0.6
SHOX2-203ENST00000441443 GMEB2Q9UKD1 530 aa18.78■□□□□ 0.6
SHOX2-203ENST00000441443 MTCL1Q9Y4B5 1905 aaKnown RBP18.78■□□□□ 0.6
SHOX2-203ENST00000441443 OR6C65A6NJZ3 312 aa18.77■□□□□ 0.6
SHOX2-203ENST00000441443 ATP1B1P05026 303 aa18.77■□□□□ 0.6
SHOX2-203ENST00000441443 SSR2P43308 183 aa18.77■□□□□ 0.6
SHOX2-203ENST00000441443 CLDN12P56749 244 aa18.77■□□□□ 0.6
SHOX2-203ENST00000441443 TRAM1Q15629 374 aa18.77■□□□□ 0.6
SHOX2-203ENST00000441443 DMKNQ6E0U4 476 aaPredicted RBP18.77■□□□□ 0.6
SHOX2-203ENST00000441443 ARSGQ96EG1 525 aa18.77■□□□□ 0.6
SHOX2-203ENST00000441443 PEX11GQ96HA9 241 aa18.77■□□□□ 0.6
SHOX2-203ENST00000441443 OR14A2Q96R54 314 aa18.77■□□□□ 0.6
SHOX2-203ENST00000441443 NOTCH4Q99466 2003 aa18.77■□□□□ 0.6
SHOX2-203ENST00000441443 SLC38A3Q99624 504 aa18.77■□□□□ 0.6
SHOX2-203ENST00000441443 PRELID3BQ9Y3B1 194 aa18.77■□□□□ 0.6
SHOX2-203ENST00000441443 PCDHGA9Q9Y5G4 932 aaKnown RBP18.77■□□□□ 0.6
SHOX2-203ENST00000441443 D6RAR5 112 aa18.77■□□□□ 0.6
SHOX2-203ENST00000441443 STX11O75558 287 aa18.77■□□□□ 0.6
SHOX2-203ENST00000441443 OR5F1O95221 314 aa18.77■□□□□ 0.6
SHOX2-203ENST00000441443 IGF2P01344 180 aa18.77■□□□□ 0.6
SHOX2-203ENST00000441443 NAT2P11245 290 aa18.77■□□□□ 0.6
SHOX2-203ENST00000441443 NTSP30990 170 aa18.77■□□□□ 0.6
SHOX2-203ENST00000441443 NRG3P56975 720 aa18.77■□□□□ 0.6
SHOX2-203ENST00000441443 C2orf68Q2NKX9 166 aa18.77■□□□□ 0.6
SHOX2-203ENST00000441443 C9orf64Q5T6V5 341 aa18.77■□□□□ 0.6
SHOX2-203ENST00000441443 HEPHL1Q6MZM0 1159 aa18.77■□□□□ 0.6
SHOX2-203ENST00000441443 LCTLQ6UWM7 567 aa18.77■□□□□ 0.6
SHOX2-203ENST00000441443 GSG1LQ6UXU4 331 aa18.77■□□□□ 0.6
SHOX2-203ENST00000441443 PAQR7Q86WK9 346 aa18.77■□□□□ 0.6
SHOX2-203ENST00000441443 THEM6Q8WUY1 208 aa18.77■□□□□ 0.6
SHOX2-203ENST00000441443 ELP4Q96EB1 424 aa18.77■□□□□ 0.6
SHOX2-203ENST00000441443 RHBGQ9H310 441 aa18.77■□□□□ 0.6
SHOX2-203ENST00000441443 ZIC2O95409 532 aaPredicted RBP18.76■□□□□ 0.59
SHOX2-203ENST00000441443 TIMP1P01033 207 aa18.76■□□□□ 0.59
SHOX2-203ENST00000441443 SBK2P0C263 348 aa18.76■□□□□ 0.59
SHOX2-203ENST00000441443 HOXB3P14651 431 aaPredicted RBP18.76■□□□□ 0.59
SHOX2-203ENST00000441443 DCTDP32321 178 aa18.76■□□□□ 0.59
SHOX2-203ENST00000441443 FGL2Q14314 439 aa18.76■□□□□ 0.59
SHOX2-203ENST00000441443 GK2Q14410 553 aaPredicted RBP18.76■□□□□ 0.59
SHOX2-203ENST00000441443 C18orf63Q68DL7 685 aa18.76■□□□□ 0.59
SHOX2-203ENST00000441443 HSD17B13Q7Z5P4 300 aaPredicted RBP18.76■□□□□ 0.59
SHOX2-203ENST00000441443 GJD3Q8N144 294 aa18.76■□□□□ 0.59
SHOX2-203ENST00000441443 OR6V1Q8N148 313 aa18.76■□□□□ 0.59
SHOX2-203ENST00000441443 VN1R2Q8NFZ6 395 aa18.76■□□□□ 0.59
SHOX2-203ENST00000441443 PFN4Q8NHR9 129 aa18.76■□□□□ 0.59
SHOX2-203ENST00000441443 ZDHHC1Q8WTX9 485 aa18.76■□□□□ 0.59
SHOX2-203ENST00000441443 SMPDL3BQ92485 455 aa18.76■□□□□ 0.59
SHOX2-203ENST00000441443 SLC6A20Q9NP91 592 aa18.76■□□□□ 0.59
SHOX2-203ENST00000441443 C20orf141Q9NUB4 165 aa18.76■□□□□ 0.59
SHOX2-203ENST00000441443 OBSL1O75147 1896 aa18.76■□□□□ 0.59
SHOX2-203ENST00000441443 NUP210Q8TEM1 1887 aaPredicted RBP18.76■□□□□ 0.59
SHOX2-203ENST00000441443 ATG2BQ96BY7 2078 aa18.76■□□□□ 0.59
SHOX2-203ENST00000441443 ZNF98A6NK75 572 aa18.76■□□□□ 0.59
SHOX2-203ENST00000441443 SYT5O00445 386 aa18.76■□□□□ 0.59
SHOX2-203ENST00000441443 LCMT2O60294 686 aaKnown RBP18.76■□□□□ 0.59
SHOX2-203ENST00000441443 SELENOFO60613 162 aa18.76■□□□□ 0.59
SHOX2-203ENST00000441443 FMO6PO60774 539 aa18.76■□□□□ 0.59
SHOX2-203ENST00000441443 LILRB5O75023 590 aa18.76■□□□□ 0.59
SHOX2-203ENST00000441443 POP7O75817 140 aaKnown RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms