RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 OPN3Q9H1Y3 402 aaPredicted RBP21.15■□□□□ 0.98
VARS-217ENST00000440048 IKZF5Q9H5V7 419 aa21.15■□□□□ 0.98
VARS-217ENST00000440048 BCL2L10Q9HD36 194 aa21.15■□□□□ 0.98
VARS-217ENST00000440048 SERINC1Q9NRX5 453 aa21.15■□□□□ 0.98
VARS-217ENST00000440048 RLIMQ9NVW2 624 aa21.15■□□□□ 0.98
VARS-217ENST00000440048 NIPSNAP3AQ9UFN0 247 aaPredicted RBP21.15■□□□□ 0.98
VARS-217ENST00000440048 ZNF443Q9Y2A4 671 aaPredicted RBP21.15■□□□□ 0.98
VARS-217ENST00000440048 NDUFAF1Q9Y375 327 aa21.15■□□□□ 0.98
VARS-217ENST00000440048 CDHR4A6H8M9 788 aa21.14■□□□□ 0.97
VARS-217ENST00000440048 SS18L1O75177 396 aaPredicted RBP21.14■□□□□ 0.97
VARS-217ENST00000440048 PLGP00747 810 aaPredicted RBP21.14■□□□□ 0.97
VARS-217ENST00000440048 CGAP01215 116 aa21.14■□□□□ 0.97
VARS-217ENST00000440048 APOBEC1P41238 236 aaKnown RBP21.14■□□□□ 0.97
VARS-217ENST00000440048 GCNT6Q5T4J0 391 aa21.14■□□□□ 0.97
VARS-217ENST00000440048 PRAMEF8Q5VWM4 474 aa21.14■□□□□ 0.97
VARS-217ENST00000440048 PRAMEF7Q5VXH5 474 aa21.14■□□□□ 0.97
VARS-217ENST00000440048 GRINAQ7Z429 371 aa21.14■□□□□ 0.97
VARS-217ENST00000440048 RETREG3Q86VR2 466 aa21.14■□□□□ 0.97
VARS-217ENST00000440048 TSPEARQ8WU66 669 aa21.14■□□□□ 0.97
VARS-217ENST00000440048 CTPS2Q9NRF8 586 aa21.14■□□□□ 0.97
VARS-217ENST00000440048 ANGPT2O15123 496 aa21.13■□□□□ 0.97
VARS-217ENST00000440048 THBS1P07996 1170 aa21.13■□□□□ 0.97
VARS-217ENST00000440048 ARAFP10398 606 aa21.13■□□□□ 0.97
VARS-217ENST00000440048 CD8BP10966 210 aa21.13■□□□□ 0.97
VARS-217ENST00000440048 MDH1P40925 334 aaKnown RBP21.13■□□□□ 0.97
VARS-217ENST00000440048 CTBP2P56545 445 aa21.13■□□□□ 0.97
VARS-217ENST00000440048 EPS8Q12929 822 aa21.13■□□□□ 0.97
VARS-217ENST00000440048 LARS2Q15031 903 aaKnown RBP21.13■□□□□ 0.97
VARS-217ENST00000440048 ZNF474Q6S9Z5 364 aaPredicted RBP21.13■□□□□ 0.97
VARS-217ENST00000440048 DHDDSQ86SQ9 333 aa21.13■□□□□ 0.97
VARS-217ENST00000440048 ZNF440Q8IYI8 595 aa21.13■□□□□ 0.97
VARS-217ENST00000440048 DPP10Q8N608 796 aa21.13■□□□□ 0.97
VARS-217ENST00000440048 BBS10Q8TAM1 723 aa21.13■□□□□ 0.97
VARS-217ENST00000440048 RNF128Q8TEB7 428 aa21.13■□□□□ 0.97
VARS-217ENST00000440048 FAM222BQ8WU58 562 aa21.13■□□□□ 0.97
VARS-217ENST00000440048 REXO5Q96IC2 774 aaKnown RBP21.13■□□□□ 0.97
VARS-217ENST00000440048 OR5B2Q96R09 309 aa21.13■□□□□ 0.97
VARS-217ENST00000440048 CPPED1Q9BRF8 314 aaPredicted RBP21.13■□□□□ 0.97
VARS-217ENST00000440048 GLRX2Q9NS18 164 aa21.13■□□□□ 0.97
VARS-217ENST00000440048 PROCRQ9UNN8 238 aa21.13■□□□□ 0.97
VARS-217ENST00000440048 ZNF232Q9UNY5 417 aa21.13■□□□□ 0.97
VARS-217ENST00000440048 EMC9Q9Y3B6 208 aa21.13■□□□□ 0.97
VARS-217ENST00000440048 CSMD2Q7Z408 3487 aa21.12■□□□□ 0.97
VARS-217ENST00000440048 CFAP73A6NFT4 308 aa21.12■□□□□ 0.97
VARS-217ENST00000440048 TUBAL3A6NHL2 446 aa21.12■□□□□ 0.97
VARS-217ENST00000440048 EVPLLA8MZ36 301 aa21.12■□□□□ 0.97
VARS-217ENST00000440048 C5orf58C9J3I9 102 aa21.12■□□□□ 0.97
VARS-217ENST00000440048 FAAHO00519 579 aa21.12■□□□□ 0.97
VARS-217ENST00000440048 PGM3O95394 542 aa21.12■□□□□ 0.97
VARS-217ENST00000440048 PABPC4LP0CB38 370 aaKnown RBP21.12■□□□□ 0.97
VARS-217ENST00000440048 GPX2P18283 190 aa21.12■□□□□ 0.97
VARS-217ENST00000440048 CPOXP36551 454 aa21.12■□□□□ 0.97
VARS-217ENST00000440048 RAC3P60763 192 aa21.12■□□□□ 0.97
VARS-217ENST00000440048 SYT14P1Q58G82 188 aa21.12■□□□□ 0.97
VARS-217ENST00000440048 RUNDC3AQ59EK9 446 aa21.12■□□□□ 0.97
VARS-217ENST00000440048 RNF220Q5VTB9 566 aa21.12■□□□□ 0.97
VARS-217ENST00000440048 GTF2IRD2BQ6EKJ0 949 aa21.12■□□□□ 0.97
VARS-217ENST00000440048 GTF2IRD2Q86UP8 949 aa21.12■□□□□ 0.97
VARS-217ENST00000440048 CLIP4Q8N3C7 705 aa21.12■□□□□ 0.97
VARS-217ENST00000440048 ZNF610Q8N9Z0 462 aa21.12■□□□□ 0.97
VARS-217ENST00000440048 OR6K3Q8NGY3 331 aa21.12■□□□□ 0.97
VARS-217ENST00000440048 NFKBIDQ8NI38 313 aa21.12■□□□□ 0.97
VARS-217ENST00000440048 LINC01560Q8TB33 94 aa21.12■□□□□ 0.97
VARS-217ENST00000440048 SLC25A43Q8WUT9 341 aaPredicted RBP21.12■□□□□ 0.97
VARS-217ENST00000440048 CACYBPQ9HB71 228 aaKnown RBP21.12■□□□□ 0.97
VARS-217ENST00000440048 CHRNA9Q9UGM1 479 aa21.12■□□□□ 0.97
VARS-217ENST00000440048 CORO2BQ9UQ03 480 aa21.12■□□□□ 0.97
VARS-217ENST00000440048 IFT52Q9Y366 437 aa21.12■□□□□ 0.97
VARS-217ENST00000440048 CHST2Q9Y4C5 530 aa21.12■□□□□ 0.97
VARS-217ENST00000440048 GKN3PP0CG01 181 aa21.11■□□□□ 0.97
VARS-217ENST00000440048 ZSWIM7Q19AV6 140 aa21.11■□□□□ 0.97
VARS-217ENST00000440048 FCRLAQ7L513 359 aa21.11■□□□□ 0.97
VARS-217ENST00000440048 ADGRG3Q86Y34 549 aa21.11■□□□□ 0.97
VARS-217ENST00000440048 ABHD3Q8WU67 409 aa21.11■□□□□ 0.97
VARS-217ENST00000440048 SPATA9Q9BWV2 254 aa21.11■□□□□ 0.97
VARS-217ENST00000440048 SPIN1Q9Y657 262 aaPredicted RBP21.11■□□□□ 0.97
VARS-217ENST00000440048 HRNRQ86YZ3 2850 aaPredicted RBP21.11■□□□□ 0.97
VARS-217ENST00000440048 IGHV3-15A0A0B4J1V0 119 aa21.1■□□□□ 0.97
VARS-217ENST00000440048 TFPIP10646 304 aa21.1■□□□□ 0.97
VARS-217ENST00000440048 UQCRBP14927 111 aa21.1■□□□□ 0.97
VARS-217ENST00000440048 ENPP1P22413 925 aa21.1■□□□□ 0.97
VARS-217ENST00000440048 ACAA2P42765 397 aaKnown RBP21.1■□□□□ 0.97
VARS-217ENST00000440048 SLC1A3P43003 542 aa21.1■□□□□ 0.97
VARS-217ENST00000440048 HTR3AP46098 478 aa21.1■□□□□ 0.97
VARS-217ENST00000440048 CDK6Q00534 326 aa21.1■□□□□ 0.97
VARS-217ENST00000440048 FAM27E3Q08E93 113 aa21.1■□□□□ 0.97
VARS-217ENST00000440048 NFYCQ13952 458 aa21.1■□□□□ 0.97
VARS-217ENST00000440048 RNPS1Q15287 305 aaKnown RBP21.1■□□□□ 0.97
VARS-217ENST00000440048 ZNF311Q5JNZ3 666 aa21.1■□□□□ 0.97
VARS-217ENST00000440048 ANKRD27Q96NW4 1050 aa21.1■□□□□ 0.97
VARS-217ENST00000440048 ZNF317Q96PQ6 595 aaPredicted RBP21.1■□□□□ 0.97
VARS-217ENST00000440048 CGREF1Q99674 301 aa21.1■□□□□ 0.97
VARS-217ENST00000440048 TMEM38AQ9H6F2 299 aa21.1■□□□□ 0.97
VARS-217ENST00000440048 SAR1AQ9NR31 198 aa21.1■□□□□ 0.97
VARS-217ENST00000440048 PLSCR4Q9NRQ2 329 aa21.1■□□□□ 0.97
VARS-217ENST00000440048 OSGIN1Q9UJX0 560 aa21.1■□□□□ 0.97
VARS-217ENST00000440048 TMED7-TICAM2A0A0A6YYA0 188 aa21.09■□□□□ 0.97
VARS-217ENST00000440048 EPXP11678 715 aa21.09■□□□□ 0.97
VARS-217ENST00000440048 ETS2P15036 469 aa21.09■□□□□ 0.97
VARS-217ENST00000440048 CCNA2P20248 432 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms