RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 C1orf105O95561 183 aa7.93□□□□□ -1.14
HPS4-206ENST00000439453 LDOC1O95751 146 aaPredicted RBP7.93□□□□□ -1.14
HPS4-206ENST00000439453 HOXB3P14651 431 aaPredicted RBP7.93□□□□□ -1.14
HPS4-206ENST00000439453 SNRPBP14678 240 aaKnown RBP7.93□□□□□ -1.14
HPS4-206ENST00000439453 GDNFP39905 211 aa7.93□□□□□ -1.14
HPS4-206ENST00000439453 CBX5P45973 191 aa7.93□□□□□ -1.14
HPS4-206ENST00000439453 FNTBP49356 437 aa7.93□□□□□ -1.14
HPS4-206ENST00000439453 CCR8P51685 355 aa7.93□□□□□ -1.14
HPS4-206ENST00000439453 E2F1Q01094 437 aa7.93□□□□□ -1.14
HPS4-206ENST00000439453 SLC3A1Q07837 685 aa7.93□□□□□ -1.14
HPS4-206ENST00000439453 HLXQ14774 488 aaPredicted RBP7.93□□□□□ -1.14
HPS4-206ENST00000439453 TRAM2Q15035 370 aa7.93□□□□□ -1.14
HPS4-206ENST00000439453 ESPNLQ6ZVH7 1005 aa7.93□□□□□ -1.14
HPS4-206ENST00000439453 HSD11B1LQ7Z5J1 315 aa7.93□□□□□ -1.14
HPS4-206ENST00000439453 OR4D9Q8NGE8 314 aa7.93□□□□□ -1.14
HPS4-206ENST00000439453 BBS10Q8TAM1 723 aa7.93□□□□□ -1.14
HPS4-206ENST00000439453 PIGKQ92643 395 aa7.93□□□□□ -1.14
HPS4-206ENST00000439453 NPAS1Q99742 590 aa7.93□□□□□ -1.14
HPS4-206ENST00000439453 SGPP1Q9BX95 441 aa7.93□□□□□ -1.14
HPS4-206ENST00000439453 AUNIPQ9H7T9 357 aa7.93□□□□□ -1.14
HPS4-206ENST00000439453 CAMK2AQ9UQM7 478 aa7.93□□□□□ -1.14
HPS4-206ENST00000439453 A0A1B0GUH1 482 aa7.93□□□□□ -1.14
HPS4-206ENST00000439453 E9PI62 339 aa7.93□□□□□ -1.14
HPS4-206ENST00000439453 PLPP1O14494 284 aa7.93□□□□□ -1.14
HPS4-206ENST00000439453 HYAL3O43820 417 aaPredicted RBP7.93□□□□□ -1.14
HPS4-206ENST00000439453 TBX19O60806 448 aa7.93□□□□□ -1.14
HPS4-206ENST00000439453 GIPP09681 153 aaPredicted RBP7.93□□□□□ -1.14
HPS4-206ENST00000439453 NDUFV2P19404 249 aa7.93□□□□□ -1.14
HPS4-206ENST00000439453 RAB3BP20337 219 aa7.93□□□□□ -1.14
HPS4-206ENST00000439453 STAT5AP42229 794 aa7.93□□□□□ -1.14
HPS4-206ENST00000439453 GNA13Q14344 377 aa7.93□□□□□ -1.14
HPS4-206ENST00000439453 ATRAIDQ6UW56 229 aa7.93□□□□□ -1.14
HPS4-206ENST00000439453 CXXC5Q7LFL8 322 aaKnown RBP7.93□□□□□ -1.14
HPS4-206ENST00000439453 HSD17B13Q7Z5P4 300 aaPredicted RBP7.93□□□□□ -1.14
HPS4-206ENST00000439453 METTL3Q86U44 580 aaKnown RBP7.93□□□□□ -1.14
HPS4-206ENST00000439453 SPICQ8N5J4 248 aa7.93□□□□□ -1.14
HPS4-206ENST00000439453 RASGEF1AQ8N9B8 481 aa7.93□□□□□ -1.14
HPS4-206ENST00000439453 ZFPM2Q8WW38 1151 aa7.93□□□□□ -1.14
HPS4-206ENST00000439453 SEC22CQ9BRL7 303 aa7.93□□□□□ -1.14
HPS4-206ENST00000439453 SAV1Q9H4B6 383 aaPredicted RBP7.93□□□□□ -1.14
HPS4-206ENST00000439453 NANSQ9NR45 359 aa7.93□□□□□ -1.14
HPS4-206ENST00000439453 CA10Q9NS85 328 aa7.93□□□□□ -1.14
HPS4-206ENST00000439453 SEMA4GQ9NTN9 838 aa7.93□□□□□ -1.14
HPS4-206ENST00000439453 AHSPQ9NZD4 102 aa7.93□□□□□ -1.14
HPS4-206ENST00000439453 IL20RAQ9UHF4 553 aa7.93□□□□□ -1.14
HPS4-206ENST00000439453 GMEB2Q9UKD1 530 aa7.93□□□□□ -1.14
HPS4-206ENST00000439453 PROB1E7EW31 1015 aa7.93□□□□□ -1.14
HPS4-206ENST00000439453 DNASE2O00115 360 aaPredicted RBP7.93□□□□□ -1.14
HPS4-206ENST00000439453 MID1O15344 667 aa7.93□□□□□ -1.14
HPS4-206ENST00000439453 SNAPC5O75971 98 aa7.93□□□□□ -1.14
HPS4-206ENST00000439453 CHRM4P08173 479 aa7.93□□□□□ -1.14
HPS4-206ENST00000439453 PSMB1P20618 241 aaKnown RBP7.93□□□□□ -1.14
HPS4-206ENST00000439453 PAICSP22234 425 aaKnown RBP7.93□□□□□ -1.14
HPS4-206ENST00000439453 CALCRP30988 508 aa7.93□□□□□ -1.14
HPS4-206ENST00000439453 GPR4P46093 362 aa7.93□□□□□ -1.14
HPS4-206ENST00000439453 SIM1P81133 766 aaPredicted RBP7.93□□□□□ -1.14
HPS4-206ENST00000439453 TRAM1Q15629 374 aa7.93□□□□□ -1.14
HPS4-206ENST00000439453 C9orf64Q5T6V5 341 aa7.93□□□□□ -1.14
HPS4-206ENST00000439453 FAM69AQ5T7M9 428 aa7.93□□□□□ -1.14
HPS4-206ENST00000439453 PIP5KL1Q5T9C9 394 aa7.93□□□□□ -1.14
HPS4-206ENST00000439453 Q6ZVL8 140 aa7.93□□□□□ -1.14
HPS4-206ENST00000439453 SUMF1Q8NBK3 374 aa7.93□□□□□ -1.14
HPS4-206ENST00000439453 FAM98AQ8NCA5 519 aaKnown RBP7.93□□□□□ -1.14
HPS4-206ENST00000439453 CLRN3Q8NCR9 226 aa7.93□□□□□ -1.14
HPS4-206ENST00000439453 SMIM4Q8WVI0 70 aa7.93□□□□□ -1.14
HPS4-206ENST00000439453 UBE2E3Q969T4 207 aa7.93□□□□□ -1.14
HPS4-206ENST00000439453 NARS2Q96I59 477 aaKnown RBP7.93□□□□□ -1.14
HPS4-206ENST00000439453 CAMK1GQ96NX5 476 aa7.93□□□□□ -1.14
HPS4-206ENST00000439453 PRRX2Q99811 253 aa7.93□□□□□ -1.14
HPS4-206ENST00000439453 DPH7Q9BTV6 452 aa7.93□□□□□ -1.14
HPS4-206ENST00000439453 TEX10Q9NXF1 929 aaPredicted RBP7.93□□□□□ -1.14
HPS4-206ENST00000439453 IL20Q9NYY1 176 aa7.93□□□□□ -1.14
HPS4-206ENST00000439453 ZMAT5Q9UDW3 170 aaKnown RBP7.93□□□□□ -1.14
HPS4-206ENST00000439453 CA5BQ9Y2D0 317 aa7.93□□□□□ -1.14
HPS4-206ENST00000439453 NPFFR2Q9Y5X5 522 aa7.93□□□□□ -1.14
HPS4-206ENST00000439453 R4GN57 208 aa7.93□□□□□ -1.14
HPS4-206ENST00000439453 DAPL1A0PJW8 107 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 ZC3H12DA2A288 527 aaKnown RBP7.92□□□□□ -1.14
HPS4-206ENST00000439453 CPSF4LA6NMK7 179 aaKnown RBP7.92□□□□□ -1.14
HPS4-206ENST00000439453 ANXA2P2A6NMY6 339 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 FRS3O43559 492 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 PLPP2O43688 288 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 PLATP00750 562 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 SERPIND1P05546 499 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 ALPPL2P10696 532 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 HOXB2P14652 356 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 ATF1P18846 271 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 CD53P19397 219 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 FRKP42685 505 aaPredicted RBP7.92□□□□□ -1.14
HPS4-206ENST00000439453 RAD52P43351 418 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 CCR9P51686 369 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 MAZP56270 477 aaKnown RBP7.92□□□□□ -1.14
HPS4-206ENST00000439453 RAP2BP61225 183 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 FLI1Q01543 452 aaPredicted RBP7.92□□□□□ -1.14
HPS4-206ENST00000439453 B3GNTL1Q67FW5 361 aaPredicted RBP7.92□□□□□ -1.14
HPS4-206ENST00000439453 BAIAP2L2Q6UXY1 529 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 C17orf107Q6ZR85 190 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 DGLUCYQ7Z3D6 616 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 PXKQ7Z7A4 578 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 IZUMO1Q8IYV9 350 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms