RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 ELOA3BQ3SY89 546 aa11.49□□□□□ -0.57
SCLT1-202ENST00000439369 PLEKHN1Q494U1 663 aaPredicted RBP11.49□□□□□ -0.57
SCLT1-202ENST00000439369 TSPYL5Q86VY4 417 aaPredicted RBP11.49□□□□□ -0.57
SCLT1-202ENST00000439369 RNF113BQ8IZP6 322 aaKnown RBP11.49□□□□□ -0.57
SCLT1-202ENST00000439369 LSM14AQ8ND56 463 aaKnown RBP11.49□□□□□ -0.57
SCLT1-202ENST00000439369 FAM83FQ8NEG4 500 aaPredicted RBP11.49□□□□□ -0.57
SCLT1-202ENST00000439369 ELOA3Q8NG57 546 aa11.49□□□□□ -0.57
SCLT1-202ENST00000439369 OR14L1PQ8NHC6 308 aa11.49□□□□□ -0.57
SCLT1-202ENST00000439369 ACOT11Q8WXI4 607 aaPredicted RBP11.49□□□□□ -0.57
SCLT1-202ENST00000439369 KLHDC3Q9BQ90 382 aa11.49□□□□□ -0.57
SCLT1-202ENST00000439369 FUZQ9BT04 418 aa11.49□□□□□ -0.57
SCLT1-202ENST00000439369 PRR14Q9BWN1 585 aa11.49□□□□□ -0.57
SCLT1-202ENST00000439369 OSBPL10Q9BXB5 764 aa11.49□□□□□ -0.57
SCLT1-202ENST00000439369 RNPEPL1Q9HAU8 725 aa11.49□□□□□ -0.57
SCLT1-202ENST00000439369 MAN2C1Q9NTJ4 1040 aa11.49□□□□□ -0.57
SCLT1-202ENST00000439369 OSGIN1Q9UJX0 560 aa11.49□□□□□ -0.57
SCLT1-202ENST00000439369 TMCC3Q9ULS5 477 aa11.49□□□□□ -0.57
SCLT1-202ENST00000439369 SLC7A7Q9UM01 511 aa11.49□□□□□ -0.57
SCLT1-202ENST00000439369 VDAC3Q9Y277 283 aa11.49□□□□□ -0.57
SCLT1-202ENST00000439369 SAMHD1Q9Y3Z3 626 aaKnown RBP11.49□□□□□ -0.57
SCLT1-202ENST00000439369 TESMINQ9Y4I5 508 aa11.49□□□□□ -0.57
SCLT1-202ENST00000439369 LYVE1Q9Y5Y7 322 aa11.49□□□□□ -0.57
SCLT1-202ENST00000439369 DMXL2Q8TDJ6 3036 aa11.48□□□□□ -0.57
SCLT1-202ENST00000439369 TMED7-TICAM2A0A0A6YYA0 188 aa11.48□□□□□ -0.57
SCLT1-202ENST00000439369 TNFRSF11BO00300 401 aa11.48□□□□□ -0.57
SCLT1-202ENST00000439369 TFECO14948 347 aaPredicted RBP11.48□□□□□ -0.57
SCLT1-202ENST00000439369 GMFGO60234 142 aa11.48□□□□□ -0.57
SCLT1-202ENST00000439369 HCN1O60741 890 aa11.48□□□□□ -0.57
SCLT1-202ENST00000439369 DIRAS1O95057 198 aa11.48□□□□□ -0.57
SCLT1-202ENST00000439369 IGHG3P01860 377 aa11.48□□□□□ -0.57
SCLT1-202ENST00000439369 THY1P04216 161 aa11.48□□□□□ -0.57
SCLT1-202ENST00000439369 ANPEPP15144 967 aa11.48□□□□□ -0.57
SCLT1-202ENST00000439369 FPR1P21462 350 aa11.48□□□□□ -0.57
SCLT1-202ENST00000439369 CXCR1P25024 350 aa11.48□□□□□ -0.57
SCLT1-202ENST00000439369 MAGEA5P43359 124 aa11.48□□□□□ -0.57
SCLT1-202ENST00000439369 YAP1P46937 504 aaKnown RBP11.48□□□□□ -0.57
SCLT1-202ENST00000439369 ARHGDIAP52565 204 aa11.48□□□□□ -0.57
SCLT1-202ENST00000439369 B3GALT5-AS1P59052 145 aa11.48□□□□□ -0.57
SCLT1-202ENST00000439369 KLRB1Q12918 225 aa11.48□□□□□ -0.57
SCLT1-202ENST00000439369 FOXF1Q12946 379 aa11.48□□□□□ -0.57
SCLT1-202ENST00000439369 SELENBP1Q13228 472 aa11.48□□□□□ -0.57
SCLT1-202ENST00000439369 C3orf33Q6P1S2 294 aa11.48□□□□□ -0.57
SCLT1-202ENST00000439369 ADGRG3Q86Y34 549 aa11.48□□□□□ -0.57
SCLT1-202ENST00000439369 SVOPLQ8N434 492 aa11.48□□□□□ -0.57
SCLT1-202ENST00000439369 TEX19Q8NA77 164 aa11.48□□□□□ -0.57
SCLT1-202ENST00000439369 OR4C15Q8NGM1 316 aa11.48□□□□□ -0.57
SCLT1-202ENST00000439369 OR6S1Q8NH40 331 aa11.48□□□□□ -0.57
SCLT1-202ENST00000439369 POC1BQ8TC44 478 aa11.48□□□□□ -0.57
SCLT1-202ENST00000439369 STK35Q8TDR2 534 aa11.48□□□□□ -0.57
SCLT1-202ENST00000439369 LRTOMTQ8WZ04 291 aa11.48□□□□□ -0.57
SCLT1-202ENST00000439369 PKP2Q99959 881 aa11.48□□□□□ -0.57
SCLT1-202ENST00000439369 PSD2Q9BQI7 771 aa11.48□□□□□ -0.57
SCLT1-202ENST00000439369 PRSS27Q9BQR3 290 aa11.48□□□□□ -0.57
SCLT1-202ENST00000439369 MFRPQ9BY79 579 aa11.48□□□□□ -0.57
SCLT1-202ENST00000439369 RASSF4Q9H2L5 321 aa11.48□□□□□ -0.57
SCLT1-202ENST00000439369 KRCC1Q9NPI7 259 aaPredicted RBP11.48□□□□□ -0.57
SCLT1-202ENST00000439369 ZNF71Q9NQZ8 489 aaPredicted RBP11.48□□□□□ -0.57
SCLT1-202ENST00000439369 CHRNA9Q9UGM1 479 aa11.48□□□□□ -0.57
SCLT1-202ENST00000439369 NTNG1Q9Y2I2 539 aa11.48□□□□□ -0.57
SCLT1-202ENST00000439369 TMED7Q9Y3B3 224 aa11.48□□□□□ -0.57
SCLT1-202ENST00000439369 ACACBO00763 2458 aa11.47□□□□□ -0.57
SCLT1-202ENST00000439369 SH3PXD2BA1X283 911 aa11.47□□□□□ -0.57
SCLT1-202ENST00000439369 OR2M5A3KFT3 312 aa11.47□□□□□ -0.57
SCLT1-202ENST00000439369 GJE1A6NN92 205 aa11.47□□□□□ -0.57
SCLT1-202ENST00000439369 FAM166BA8MTA8 275 aa11.47□□□□□ -0.57
SCLT1-202ENST00000439369 A8MVM7 634 aa11.47□□□□□ -0.57
SCLT1-202ENST00000439369 SUSD5O60279 629 aa11.47□□□□□ -0.57
SCLT1-202ENST00000439369 E2F6O75461 281 aa11.47□□□□□ -0.57
SCLT1-202ENST00000439369 TRAPPC6AO75865 159 aa11.47□□□□□ -0.57
SCLT1-202ENST00000439369 ACTL6AO96019 429 aa11.47□□□□□ -0.57
SCLT1-202ENST00000439369 IFNGR2P38484 337 aa11.47□□□□□ -0.57
SCLT1-202ENST00000439369 GFRA1P56159 465 aa11.47□□□□□ -0.57
SCLT1-202ENST00000439369 ALDH6A1Q02252 535 aaKnown RBP11.47□□□□□ -0.57
SCLT1-202ENST00000439369 TOMM20Q15388 145 aa11.47□□□□□ -0.57
SCLT1-202ENST00000439369 BCL2A1Q16548 175 aa11.47□□□□□ -0.57
SCLT1-202ENST00000439369 NADK2Q4G0N4 442 aa11.47□□□□□ -0.57
SCLT1-202ENST00000439369 NHSL2Q5HYW2 709 aa11.47□□□□□ -0.57
SCLT1-202ENST00000439369 FGD3Q5JSP0 725 aa11.47□□□□□ -0.57
SCLT1-202ENST00000439369 RNFT1Q5M7Z0 435 aa11.47□□□□□ -0.57
SCLT1-202ENST00000439369 DCST1Q5T197 706 aa11.47□□□□□ -0.57
SCLT1-202ENST00000439369 RAET1LQ5VY80 246 aa11.47□□□□□ -0.57
SCLT1-202ENST00000439369 SHQ1Q6PI26 577 aaKnown RBP11.47□□□□□ -0.57
SCLT1-202ENST00000439369 TTC33Q6PID6 262 aaPredicted RBP11.47□□□□□ -0.57
SCLT1-202ENST00000439369 FAM180AQ6UWF9 173 aa11.47□□□□□ -0.57
SCLT1-202ENST00000439369 MBOAT2Q6ZWT7 520 aa11.47□□□□□ -0.57
SCLT1-202ENST00000439369 HIPK1Q86Z02 1210 aa11.47□□□□□ -0.57
SCLT1-202ENST00000439369 SIAH3Q8IW03 269 aa11.47□□□□□ -0.57
SCLT1-202ENST00000439369 LILRA2Q8N149 483 aa11.47□□□□□ -0.57
SCLT1-202ENST00000439369 OR5K1Q8NHB7 308 aa11.47□□□□□ -0.57
SCLT1-202ENST00000439369 SLC7A13Q8TCU3 470 aa11.47□□□□□ -0.57
SCLT1-202ENST00000439369 TMEM239Q8WW34 195 aa11.47□□□□□ -0.57
SCLT1-202ENST00000439369 ZNF524Q96C55 264 aa11.47□□□□□ -0.57
SCLT1-202ENST00000439369 ALPK1Q96QP1 1244 aa11.47□□□□□ -0.57
SCLT1-202ENST00000439369 POTEKPQ9BYX7 375 aa11.47□□□□□ -0.57
SCLT1-202ENST00000439369 KLHL4Q9C0H6 718 aa11.47□□□□□ -0.57
SCLT1-202ENST00000439369 NTN4Q9HB63 628 aa11.47□□□□□ -0.57
SCLT1-202ENST00000439369 C8orf4Q9NR00 106 aa11.47□□□□□ -0.57
SCLT1-202ENST00000439369 CTPS2Q9NRF8 586 aa11.47□□□□□ -0.57
SCLT1-202ENST00000439369 PLSCR2Q9NRY7 297 aa11.47□□□□□ -0.57
SCLT1-202ENST00000439369 TMEM5Q9Y2B1 443 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms