RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 A0A0G2JPF8 293 aa12.55□□□□□ -0.4
PCNX3-202ENST00000439247 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.55□□□□□ -0.4
PCNX3-202ENST00000439247 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.55□□□□□ -0.4
PCNX3-202ENST00000439247 A0A1W2PR48 441 aa12.55□□□□□ -0.4
PCNX3-202ENST00000439247 HNRNPCL3B7ZW38 293 aa12.55□□□□□ -0.4
PCNX3-202ENST00000439247 KDM4BO94953 1096 aa12.55□□□□□ -0.4
PCNX3-202ENST00000439247 HNRNPCL4P0DMR1 293 aa12.55□□□□□ -0.4
PCNX3-202ENST00000439247 TPMTP51580 245 aa12.55□□□□□ -0.4
PCNX3-202ENST00000439247 OR4C11Q6IEV9 310 aa12.55□□□□□ -0.4
PCNX3-202ENST00000439247 LCTLQ6UWM7 567 aa12.55□□□□□ -0.4
PCNX3-202ENST00000439247 ING5Q8WYH8 240 aa12.55□□□□□ -0.4
PCNX3-202ENST00000439247 ZNF707Q96C28 371 aaPredicted RBP12.55□□□□□ -0.4
PCNX3-202ENST00000439247 ZNF578Q96N58 590 aaPredicted RBP12.55□□□□□ -0.4
PCNX3-202ENST00000439247 TEX12Q9BXU0 123 aa12.55□□□□□ -0.4
PCNX3-202ENST00000439247 COPZ2Q9P299 210 aa12.55□□□□□ -0.4
PCNX3-202ENST00000439247 KIAA1549LQ6ZVL6 1849 aa12.54□□□□□ -0.4
PCNX3-202ENST00000439247 TRAV27A0A087WT01 109 aa12.54□□□□□ -0.4
PCNX3-202ENST00000439247 PRR23D1E9PI22 279 aaPredicted RBP12.54□□□□□ -0.4
PCNX3-202ENST00000439247 PSMD9O00233 223 aa12.54□□□□□ -0.4
PCNX3-202ENST00000439247 MAN2B1O00754 1011 aa12.54□□□□□ -0.4
PCNX3-202ENST00000439247 SC5DO75845 299 aa12.54□□□□□ -0.4
PCNX3-202ENST00000439247 APOC3P02656 99 aa12.54□□□□□ -0.4
PCNX3-202ENST00000439247 IFNA16P05015 189 aa12.54□□□□□ -0.4
PCNX3-202ENST00000439247 RHOP08100 348 aa12.54□□□□□ -0.4
PCNX3-202ENST00000439247 PRR23D2P0DMB1 279 aaPredicted RBP12.54□□□□□ -0.4
PCNX3-202ENST00000439247 PSMB1P20618 241 aaKnown RBP12.54□□□□□ -0.4
PCNX3-202ENST00000439247 NFYAP23511 347 aaPredicted RBP12.54□□□□□ -0.4
PCNX3-202ENST00000439247 GPR1P46091 355 aa12.54□□□□□ -0.4
PCNX3-202ENST00000439247 PSMA6P60900 246 aaKnown RBP12.54□□□□□ -0.4
PCNX3-202ENST00000439247 FGL2Q14314 439 aa12.54□□□□□ -0.4
PCNX3-202ENST00000439247 HLXQ14774 488 aaPredicted RBP12.54□□□□□ -0.4
PCNX3-202ENST00000439247 TEAD2Q15562 447 aa12.54□□□□□ -0.4
PCNX3-202ENST00000439247 RPE65Q16518 533 aa12.54□□□□□ -0.4
PCNX3-202ENST00000439247 TFAP2EQ6VUC0 442 aa12.54□□□□□ -0.4
PCNX3-202ENST00000439247 MBOAT2Q6ZWT7 520 aa12.54□□□□□ -0.4
PCNX3-202ENST00000439247 FANK1Q8TC84 345 aa12.54□□□□□ -0.4
PCNX3-202ENST00000439247 TFGQ92734 400 aaPredicted RBP12.54□□□□□ -0.4
PCNX3-202ENST00000439247 RHBGQ9H310 441 aa12.54□□□□□ -0.4
PCNX3-202ENST00000439247 IGFLR1Q9H665 355 aa12.54□□□□□ -0.4
PCNX3-202ENST00000439247 SYNDIG1Q9H7V2 258 aa12.54□□□□□ -0.4
PCNX3-202ENST00000439247 IFT46Q9NQC8 304 aa12.54□□□□□ -0.4
PCNX3-202ENST00000439247 NPDC1Q9NQX5 325 aaPredicted RBP12.54□□□□□ -0.4
PCNX3-202ENST00000439247 SNRNP200O75643 2136 aaKnown RBP12.54□□□□□ -0.4
PCNX3-202ENST00000439247 NPIPA5A0A0B4J1W7 369 aa12.54□□□□□ -0.4
PCNX3-202ENST00000439247 ANKRD61A6NGH8 418 aa12.54□□□□□ -0.4
PCNX3-202ENST00000439247 MCRIP1C9JLW8 97 aa12.54□□□□□ -0.4
PCNX3-202ENST00000439247 NPIPA7E9PJI5 369 aa12.54□□□□□ -0.4
PCNX3-202ENST00000439247 PDCD5O14737 125 aa12.54□□□□□ -0.4
PCNX3-202ENST00000439247 SUSD5O60279 629 aa12.54□□□□□ -0.4
PCNX3-202ENST00000439247 NPIPA8P0DM63 369 aa12.54□□□□□ -0.4
PCNX3-202ENST00000439247 TYRP14679 529 aa12.54□□□□□ -0.4
PCNX3-202ENST00000439247 GALP22466 123 aa12.54□□□□□ -0.4
PCNX3-202ENST00000439247 DCTDP32321 178 aa12.54□□□□□ -0.4
PCNX3-202ENST00000439247 ADH7P40394 386 aa12.54□□□□□ -0.4
PCNX3-202ENST00000439247 MAZP56270 477 aaKnown RBP12.54□□□□□ -0.4
PCNX3-202ENST00000439247 LINC00303Q3SY05 128 aa12.54□□□□□ -0.4
PCNX3-202ENST00000439247 RELL2Q8NC24 303 aaPredicted RBP12.54□□□□□ -0.4
PCNX3-202ENST00000439247 SLC16A11Q8NCK7 471 aa12.54□□□□□ -0.4
PCNX3-202ENST00000439247 OR13C2Q8NGS9 318 aa12.54□□□□□ -0.4
PCNX3-202ENST00000439247 OR51A7Q8NH64 312 aa12.54□□□□□ -0.4
PCNX3-202ENST00000439247 SMIM4Q8WVI0 70 aa12.54□□□□□ -0.4
PCNX3-202ENST00000439247 MAFFQ9ULX9 164 aa12.54□□□□□ -0.4
PCNX3-202ENST00000439247 TRIOBPQ9H2D6 2365 aa12.54□□□□□ -0.4
PCNX3-202ENST00000439247 A0A0A6YYD5 115 aa12.53□□□□□ -0.4
PCNX3-202ENST00000439247 LATO43561 262 aa12.53□□□□□ -0.4
PCNX3-202ENST00000439247 CBX7O95931 251 aa12.53□□□□□ -0.4
PCNX3-202ENST00000439247 IGF2P01344 180 aa12.53□□□□□ -0.4
PCNX3-202ENST00000439247 NTSP30990 170 aa12.53□□□□□ -0.4
PCNX3-202ENST00000439247 PSMB10P40306 273 aa12.53□□□□□ -0.4
PCNX3-202ENST00000439247 DECR1Q16698 335 aa12.53□□□□□ -0.4
PCNX3-202ENST00000439247 DPPA4Q7L190 304 aa12.53□□□□□ -0.4
PCNX3-202ENST00000439247 OR5M1Q8NGP8 315 aa12.53□□□□□ -0.4
PCNX3-202ENST00000439247 SETD7Q8WTS6 366 aaKnown RBP12.53□□□□□ -0.4
PCNX3-202ENST00000439247 RAD51AP1Q96B01 352 aa12.53□□□□□ -0.4
PCNX3-202ENST00000439247 RADILQ96JH8 1075 aa12.53□□□□□ -0.4
PCNX3-202ENST00000439247 CAMK1GQ96NX5 476 aa12.53□□□□□ -0.4
PCNX3-202ENST00000439247 IFT27Q9BW83 186 aa12.53□□□□□ -0.4
PCNX3-202ENST00000439247 OR52A5Q9H2C5 316 aa12.53□□□□□ -0.4
PCNX3-202ENST00000439247 SYNPO2LQ9H987 977 aa12.53□□□□□ -0.4
PCNX3-202ENST00000439247 NOX3Q9HBY0 568 aa12.53□□□□□ -0.4
PCNX3-202ENST00000439247 IL36AQ9UHA7 158 aa12.53□□□□□ -0.4
PCNX3-202ENST00000439247 ING1Q9UK53 422 aaPredicted RBP12.53□□□□□ -0.4
PCNX3-202ENST00000439247 BAIAP2Q9UQB8 552 aa12.53□□□□□ -0.4
PCNX3-202ENST00000439247 SPINT1O43278 529 aa12.53□□□□□ -0.4
PCNX3-202ENST00000439247 OR5F1O95221 314 aa12.53□□□□□ -0.4
PCNX3-202ENST00000439247 SNRPNP63162 240 aaKnown RBP12.53□□□□□ -0.4
PCNX3-202ENST00000439247 BDH1Q02338 343 aa12.53□□□□□ -0.4
PCNX3-202ENST00000439247 BAMBIQ13145 260 aa12.53□□□□□ -0.4
PCNX3-202ENST00000439247 FAM46CQ5VWP2 391 aa12.53□□□□□ -0.4
PCNX3-202ENST00000439247 SLC22A10Q63ZE4 541 aa12.53□□□□□ -0.4
PCNX3-202ENST00000439247 TPRA1Q86W33 373 aa12.53□□□□□ -0.4
PCNX3-202ENST00000439247 CMIPQ8IY22 773 aa12.53□□□□□ -0.4
PCNX3-202ENST00000439247 SHISA5Q8N114 240 aa12.53□□□□□ -0.4
PCNX3-202ENST00000439247 MEIOBQ8N635 442 aa12.53□□□□□ -0.4
PCNX3-202ENST00000439247 ZNF433Q8N7K0 673 aaPredicted RBP12.53□□□□□ -0.4
PCNX3-202ENST00000439247 NUP43Q8NFH3 380 aa12.53□□□□□ -0.4
PCNX3-202ENST00000439247 SMPDL3BQ92485 455 aa12.53□□□□□ -0.4
PCNX3-202ENST00000439247 COL26A1Q96A83 441 aa12.53□□□□□ -0.4
PCNX3-202ENST00000439247 TTYH1Q9H313 450 aaPredicted RBP12.53□□□□□ -0.4
PCNX3-202ENST00000439247 SAV1Q9H4B6 383 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms