RNA–Protein interactions for RNA: ENST00000439106.5

PRAME-209, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 891 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-209ENST00000439106 ZIM2Q9NZV7 527 aa12.32□□□□□ -0.44
PRAME-209ENST00000439106 KLHL13Q9P2N7 655 aa12.32□□□□□ -0.44
PRAME-209ENST00000439106 ING1Q9UK53 422 aaPredicted RBP12.32□□□□□ -0.44
PRAME-209ENST00000439106 SLC35A3Q9Y2D2 325 aa12.32□□□□□ -0.44
PRAME-209ENST00000439106 PLCE1Q9P212 2302 aa12.31□□□□□ -0.44
PRAME-209ENST00000439106 AGAP5A6NIR3 686 aa12.31□□□□□ -0.44
PRAME-209ENST00000439106 BCHEP06276 602 aa12.31□□□□□ -0.44
PRAME-209ENST00000439106 FESP07332 822 aa12.31□□□□□ -0.44
PRAME-209ENST00000439106 GUSBP08236 651 aa12.31□□□□□ -0.44
PRAME-209ENST00000439106 NR2F1P10589 423 aa12.31□□□□□ -0.44
PRAME-209ENST00000439106 TFPIP10646 304 aa12.31□□□□□ -0.44
PRAME-209ENST00000439106 LOXP28300 417 aaPredicted RBP12.31□□□□□ -0.44
PRAME-209ENST00000439106 CRATP43155 626 aa12.31□□□□□ -0.44
PRAME-209ENST00000439106 IDH2P48735 452 aaKnown RBP12.31□□□□□ -0.44
PRAME-209ENST00000439106 DIO1P49895 249 aa12.31□□□□□ -0.44
PRAME-209ENST00000439106 RNPS1Q15287 305 aaKnown RBP12.31□□□□□ -0.44
PRAME-209ENST00000439106 SYT14P1Q58G82 188 aa12.31□□□□□ -0.44
PRAME-209ENST00000439106 TMEM201Q5SNT2 666 aa12.31□□□□□ -0.44
PRAME-209ENST00000439106 MRPL2Q5T653 305 aaKnown RBP12.31□□□□□ -0.44
PRAME-209ENST00000439106 TFAP2EQ6VUC0 442 aa12.31□□□□□ -0.44
PRAME-209ENST00000439106 LRRC74BQ6ZQY2 392 aa12.31□□□□□ -0.44
PRAME-209ENST00000439106 CXorf67Q86X51 503 aaPredicted RBP12.31□□□□□ -0.44
PRAME-209ENST00000439106 WFDC8Q8IUA0 241 aa12.31□□□□□ -0.44
PRAME-209ENST00000439106 MIER2Q8N344 545 aa12.31□□□□□ -0.44
PRAME-209ENST00000439106 ARFGAP2Q8N6H7 521 aa12.31□□□□□ -0.44
PRAME-209ENST00000439106 WDR60Q8WVS4 1066 aa12.31□□□□□ -0.44
PRAME-209ENST00000439106 TMEM234Q8WY98 164 aa12.31□□□□□ -0.44
PRAME-209ENST00000439106 THOC1Q96FV9 657 aaKnown RBP12.31□□□□□ -0.44
PRAME-209ENST00000439106 TRNT1Q96Q11 434 aaKnown RBP12.31□□□□□ -0.44
PRAME-209ENST00000439106 CCDC106Q9BWC9 280 aa12.31□□□□□ -0.44
PRAME-209ENST00000439106 ACTR6Q9GZN1 396 aa12.31□□□□□ -0.44
PRAME-209ENST00000439106 UBTD1Q9HAC8 227 aa12.31□□□□□ -0.44
PRAME-209ENST00000439106 TIGARQ9NQ88 270 aa12.31□□□□□ -0.44
PRAME-209ENST00000439106 TCF7L2Q9NQB0 619 aa12.31□□□□□ -0.44
PRAME-209ENST00000439106 ZFHX3Q15911 3703 aa12.31□□□□□ -0.44
PRAME-209ENST00000439106 POLR3GO15318 223 aaPredicted RBP12.3□□□□□ -0.44
PRAME-209ENST00000439106 GCM2O75603 506 aaPredicted RBP12.3□□□□□ -0.44
PRAME-209ENST00000439106 PRKD3O94806 890 aa12.3□□□□□ -0.44
PRAME-209ENST00000439106 GOSR1O95249 250 aa12.3□□□□□ -0.44
PRAME-209ENST00000439106 KRT75O95678 551 aa12.3□□□□□ -0.44
PRAME-209ENST00000439106 NUDT7P0C024 238 aa12.3□□□□□ -0.44
PRAME-209ENST00000439106 PABPC4LP0CB38 370 aaKnown RBP12.3□□□□□ -0.44
PRAME-209ENST00000439106 GKN3PP0CG01 181 aa12.3□□□□□ -0.44
PRAME-209ENST00000439106 CD53P19397 219 aa12.3□□□□□ -0.44
PRAME-209ENST00000439106 RPS4Y1P22090 263 aaKnown RBP12.3□□□□□ -0.44
PRAME-209ENST00000439106 PCYT1AP49585 367 aa12.3□□□□□ -0.44
PRAME-209ENST00000439106 IDH3AP50213 366 aa12.3□□□□□ -0.44
PRAME-209ENST00000439106 RAC3P60763 192 aa12.3□□□□□ -0.44
PRAME-209ENST00000439106 DSTNP60981 165 aa12.3□□□□□ -0.44
PRAME-209ENST00000439106 LRRC74AQ0VAA2 488 aa12.3□□□□□ -0.44
PRAME-209ENST00000439106 DEFB113Q30KQ7 82 aa12.3□□□□□ -0.44
PRAME-209ENST00000439106 GTF2IRD2BQ6EKJ0 949 aa12.3□□□□□ -0.44
PRAME-209ENST00000439106 ZNF836Q6ZNA1 936 aa12.3□□□□□ -0.44
PRAME-209ENST00000439106 BEND4Q6ZU67 534 aa12.3□□□□□ -0.44
PRAME-209ENST00000439106 GTF2IRD2Q86UP8 949 aa12.3□□□□□ -0.44
PRAME-209ENST00000439106 VRK2Q86Y07 508 aa12.3□□□□□ -0.44
PRAME-209ENST00000439106 ITCHQ96J02 903 aa12.3□□□□□ -0.44
PRAME-209ENST00000439106 TPT1P8Q9HAU6 139 aa12.3□□□□□ -0.44
PRAME-209ENST00000439106 EXOSC3Q9NQT5 275 aaKnown RBP12.3□□□□□ -0.44
PRAME-209ENST00000439106 SERINC1Q9NRX5 453 aa12.3□□□□□ -0.44
PRAME-209ENST00000439106 RLIMQ9NVW2 624 aa12.3□□□□□ -0.44
PRAME-209ENST00000439106 P2RX2Q9UBL9 471 aa12.3□□□□□ -0.44
PRAME-209ENST00000439106 CHRNA9Q9UGM1 479 aa12.3□□□□□ -0.44
PRAME-209ENST00000439106 PRSS50Q9UI38 385 aa12.3□□□□□ -0.44
PRAME-209ENST00000439106 LIPT1Q9Y234 373 aa12.3□□□□□ -0.44
PRAME-209ENST00000439106 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.29□□□□□ -0.44
PRAME-209ENST00000439106 FAM234BA2RU67 622 aa12.29□□□□□ -0.44
PRAME-209ENST00000439106 ZNF814B7Z6K7 855 aa12.29□□□□□ -0.44
PRAME-209ENST00000439106 SULT2B1O00204 365 aa12.29□□□□□ -0.44
PRAME-209ENST00000439106 RAMP1O60894 148 aa12.29□□□□□ -0.44
PRAME-209ENST00000439106 PLAUP00749 431 aa12.29□□□□□ -0.44
PRAME-209ENST00000439106 YES1P07947 543 aa12.29□□□□□ -0.44
PRAME-209ENST00000439106 IL7RP16871 459 aa12.29□□□□□ -0.44
PRAME-209ENST00000439106 ANXA11P50995 505 aaKnown RBP12.29□□□□□ -0.44
PRAME-209ENST00000439106 AQP5P55064 265 aa12.29□□□□□ -0.44
PRAME-209ENST00000439106 RASGEF1BQ0VAM2 473 aa12.29□□□□□ -0.44
PRAME-209ENST00000439106 AP1ARQ63HQ0 302 aa12.29□□□□□ -0.44
PRAME-209ENST00000439106 TMPPEQ6ZT21 453 aa12.29□□□□□ -0.44
PRAME-209ENST00000439106 GRINAQ7Z429 371 aa12.29□□□□□ -0.44
PRAME-209ENST00000439106 ATG4DQ86TL0 474 aaPredicted RBP12.29□□□□□ -0.44
PRAME-209ENST00000439106 STK32CQ86UX6 486 aa12.29□□□□□ -0.44
PRAME-209ENST00000439106 ADGRG3Q86Y34 549 aa12.29□□□□□ -0.44
PRAME-209ENST00000439106 GABRG1Q8N1C3 465 aa12.29□□□□□ -0.44
PRAME-209ENST00000439106 DYDC1Q8WWB3 177 aa12.29□□□□□ -0.44
PRAME-209ENST00000439106 GTF2H4Q92759 462 aa12.29□□□□□ -0.44
PRAME-209ENST00000439106 S100PBPQ96BU1 408 aa12.29□□□□□ -0.44
PRAME-209ENST00000439106 TMEM19Q96HH6 336 aa12.29□□□□□ -0.44
PRAME-209ENST00000439106 ALPK1Q96QP1 1244 aa12.29□□□□□ -0.44
PRAME-209ENST00000439106 PAIP1Q9H074 479 aaKnown RBP12.29□□□□□ -0.44
PRAME-209ENST00000439106 RMND5AQ9H871 391 aa12.29□□□□□ -0.44
PRAME-209ENST00000439106 SLAMF8Q9P0V8 285 aa12.29□□□□□ -0.44
PRAME-209ENST00000439106 KLHL9Q9P2J3 617 aa12.29□□□□□ -0.44
PRAME-209ENST00000439106 PCDHB14Q9Y5E9 798 aa12.29□□□□□ -0.44
PRAME-209ENST00000439106 TMED7-TICAM2A0A0A6YYA0 188 aa12.28□□□□□ -0.44
PRAME-209ENST00000439106 TMEM72A0PK05 275 aa12.28□□□□□ -0.44
PRAME-209ENST00000439106 NR5A2O00482 541 aa12.28□□□□□ -0.44
PRAME-209ENST00000439106 KLF4O43474 513 aa12.28□□□□□ -0.44
PRAME-209ENST00000439106 CYTIPO60759 359 aa12.28□□□□□ -0.44
PRAME-209ENST00000439106 ADAP00813 363 aa12.28□□□□□ -0.44
PRAME-209ENST00000439106 DBIP07108 87 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms