RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 TIMP2P16035 220 aa12.39□□□□□ -0.43
ACTN1-204ENST00000438964 MST1P26927 711 aa12.39□□□□□ -0.43
ACTN1-204ENST00000438964 IFNGR2P38484 337 aa12.39□□□□□ -0.43
ACTN1-204ENST00000438964 B2MP61769 119 aa12.39□□□□□ -0.43
ACTN1-204ENST00000438964 GAREM2Q75VX8 874 aa12.39□□□□□ -0.43
ACTN1-204ENST00000438964 OVCH2Q7RTZ1 564 aa12.39□□□□□ -0.43
ACTN1-204ENST00000438964 ZNF547Q8IVP9 402 aa12.39□□□□□ -0.43
ACTN1-204ENST00000438964 SLC16A11Q8NCK7 471 aa12.39□□□□□ -0.43
ACTN1-204ENST00000438964 OR10K1Q8NGX5 313 aa12.39□□□□□ -0.43
ACTN1-204ENST00000438964 OR7D2Q96RA2 312 aa12.39□□□□□ -0.43
ACTN1-204ENST00000438964 SPATA5L1Q9BVQ7 753 aa12.39□□□□□ -0.43
ACTN1-204ENST00000438964 TEX12Q9BXU0 123 aa12.39□□□□□ -0.43
ACTN1-204ENST00000438964 CHST6Q9GZX3 395 aa12.39□□□□□ -0.43
ACTN1-204ENST00000438964 SLC6A17Q9H1V8 727 aa12.39□□□□□ -0.43
ACTN1-204ENST00000438964 PTTG3PQ9NZH4 202 aa12.39□□□□□ -0.43
ACTN1-204ENST00000438964 MLXQ9UH92 298 aa12.39□□□□□ -0.43
ACTN1-204ENST00000438964 A0A1B0GVT2 93 aa12.39□□□□□ -0.43
ACTN1-204ENST00000438964 NDUFS4O43181 175 aa12.39□□□□□ -0.43
ACTN1-204ENST00000438964 CREBL2O60519 120 aaPredicted RBP12.39□□□□□ -0.43
ACTN1-204ENST00000438964 RPP14O95059 124 aaKnown RBP12.39□□□□□ -0.43
ACTN1-204ENST00000438964 FGF2P09038 288 aa12.39□□□□□ -0.43
ACTN1-204ENST00000438964 SNRPNP63162 240 aaKnown RBP12.39□□□□□ -0.43
ACTN1-204ENST00000438964 GK2Q14410 553 aaPredicted RBP12.39□□□□□ -0.43
ACTN1-204ENST00000438964 SLC22A10Q63ZE4 541 aa12.39□□□□□ -0.43
ACTN1-204ENST00000438964 TMEM215Q68D42 235 aa12.39□□□□□ -0.43
ACTN1-204ENST00000438964 ZNF660Q6AZW8 331 aaPredicted RBP12.39□□□□□ -0.43
ACTN1-204ENST00000438964 IKBIPQ70UQ0 350 aa12.39□□□□□ -0.43
ACTN1-204ENST00000438964 RASGRP3Q8IV61 690 aa12.39□□□□□ -0.43
ACTN1-204ENST00000438964 BPIFCQ8NFQ6 507 aa12.39□□□□□ -0.43
ACTN1-204ENST00000438964 SUN3Q8TAQ9 357 aa12.39□□□□□ -0.43
ACTN1-204ENST00000438964 ZNF75AQ96N20 296 aa12.39□□□□□ -0.43
ACTN1-204ENST00000438964 MS4A8Q9BY19 250 aa12.39□□□□□ -0.43
ACTN1-204ENST00000438964 ESRP2Q9H6T0 727 aaKnown RBP12.39□□□□□ -0.43
ACTN1-204ENST00000438964 NOX4Q9NPH5 578 aa12.39□□□□□ -0.43
ACTN1-204ENST00000438964 NPDC1Q9NQX5 325 aaPredicted RBP12.39□□□□□ -0.43
ACTN1-204ENST00000438964 AHSPQ9NZD4 102 aa12.39□□□□□ -0.43
ACTN1-204ENST00000438964 NPTNQ9Y639 398 aa12.39□□□□□ -0.43
ACTN1-204ENST00000438964 ATG2BQ96BY7 2078 aa12.38□□□□□ -0.43
ACTN1-204ENST00000438964 AIPO00170 330 aa12.38□□□□□ -0.43
ACTN1-204ENST00000438964 ADAMTS4O75173 837 aa12.38□□□□□ -0.43
ACTN1-204ENST00000438964 GABRA1P14867 456 aa12.38□□□□□ -0.43
ACTN1-204ENST00000438964 CBR1P16152 277 aa12.38□□□□□ -0.43
ACTN1-204ENST00000438964 CBX5P45973 191 aa12.38□□□□□ -0.43
ACTN1-204ENST00000438964 GDI2P50395 445 aaKnown RBP12.38□□□□□ -0.43
ACTN1-204ENST00000438964 GUCA2AQ02747 115 aa12.38□□□□□ -0.43
ACTN1-204ENST00000438964 GNA13Q14344 377 aa12.38□□□□□ -0.43
ACTN1-204ENST00000438964 AKIRIN2Q53H80 203 aa12.38□□□□□ -0.43
ACTN1-204ENST00000438964 METTL11BQ5VVY1 283 aa12.38□□□□□ -0.43
ACTN1-204ENST00000438964 SEZ6L2Q6UXD5 910 aa12.38□□□□□ -0.43
ACTN1-204ENST00000438964 Q6ZNB5 142 aa12.38□□□□□ -0.43
ACTN1-204ENST00000438964 LRRC56Q8IYG6 542 aaPredicted RBP12.38□□□□□ -0.43
ACTN1-204ENST00000438964 SDR9C7Q8NEX9 313 aa12.38□□□□□ -0.43
ACTN1-204ENST00000438964 ZNF461Q8TAF7 563 aa12.38□□□□□ -0.43
ACTN1-204ENST00000438964 SCARB1Q8WTV0 552 aa12.38□□□□□ -0.43
ACTN1-204ENST00000438964 ACOT11Q8WXI4 607 aaPredicted RBP12.38□□□□□ -0.43
ACTN1-204ENST00000438964 RGMAQ96B86 450 aa12.38□□□□□ -0.43
ACTN1-204ENST00000438964 DPYSL5Q9BPU6 564 aa12.38□□□□□ -0.43
ACTN1-204ENST00000438964 AICDAQ9GZX7 198 aa12.38□□□□□ -0.43
ACTN1-204ENST00000438964 TSPAN10Q9H1Z9 355 aaPredicted RBP12.38□□□□□ -0.43
ACTN1-204ENST00000438964 FANCFQ9NPI8 374 aa12.38□□□□□ -0.43
ACTN1-204ENST00000438964 SLC25A13Q9UJS0 675 aa12.38□□□□□ -0.43
ACTN1-204ENST00000438964 LSM7Q9UK45 103 aaKnown RBP12.38□□□□□ -0.43
ACTN1-204ENST00000438964 DENND4CQ5VZ89 1909 aa12.38□□□□□ -0.43
ACTN1-204ENST00000438964 D6RAR5 112 aa12.38□□□□□ -0.43
ACTN1-204ENST00000438964 PCSK2P16519 638 aa12.38□□□□□ -0.43
ACTN1-204ENST00000438964 UGT2B7P16662 529 aa12.38□□□□□ -0.43
ACTN1-204ENST00000438964 KHKP50053 298 aa12.38□□□□□ -0.43
ACTN1-204ENST00000438964 GPR85P60893 370 aa12.38□□□□□ -0.43
ACTN1-204ENST00000438964 GLDNQ6ZMI3 551 aaPredicted RBP12.38□□□□□ -0.43
ACTN1-204ENST00000438964 NUDT13Q86X67 352 aa12.38□□□□□ -0.43
ACTN1-204ENST00000438964 FAM129CQ86XR2 697 aa12.38□□□□□ -0.43
ACTN1-204ENST00000438964 DNAJA3Q96EY1 480 aa12.38□□□□□ -0.43
ACTN1-204ENST00000438964 TAS2R10Q9NYW0 307 aa12.38□□□□□ -0.43
ACTN1-204ENST00000438964 PRELID3BQ9Y3B1 194 aa12.38□□□□□ -0.43
ACTN1-204ENST00000438964 Q9Y3F1 56 aa12.38□□□□□ -0.43
ACTN1-204ENST00000438964 EYSQ5T1H1 3165 aa12.38□□□□□ -0.43
ACTN1-204ENST00000438964 TRBV2A0A0J9YWF9 115 aa12.37□□□□□ -0.43
ACTN1-204ENST00000438964 C4orf47A7E2U8 309 aa12.37□□□□□ -0.43
ACTN1-204ENST00000438964 J3QRE1 110 aa12.37□□□□□ -0.43
ACTN1-204ENST00000438964 ERI3O43414 337 aaKnown RBP12.37□□□□□ -0.43
ACTN1-204ENST00000438964 GALR3O60755 368 aaPredicted RBP12.37□□□□□ -0.43
ACTN1-204ENST00000438964 ATP1B1P05026 303 aa12.37□□□□□ -0.43
ACTN1-204ENST00000438964 APEHP13798 732 aaKnown RBP12.37□□□□□ -0.43
ACTN1-204ENST00000438964 BMP7P18075 431 aa12.37□□□□□ -0.43
ACTN1-204ENST00000438964 RAB3AP20336 220 aa12.37□□□□□ -0.43
ACTN1-204ENST00000438964 TAS2R38P59533 333 aa12.37□□□□□ -0.43
ACTN1-204ENST00000438964 PITPNAQ00169 270 aa12.37□□□□□ -0.43
ACTN1-204ENST00000438964 MRGPREQ86SM8 312 aa12.37□□□□□ -0.43
ACTN1-204ENST00000438964 TRAM1L1Q8N609 369 aa12.37□□□□□ -0.43
ACTN1-204ENST00000438964 OR4K13Q8NH42 304 aa12.37□□□□□ -0.43
ACTN1-204ENST00000438964 FIBINQ8TAL6 211 aa12.37□□□□□ -0.43
ACTN1-204ENST00000438964 SYNPRQ8TBG9 265 aa12.37□□□□□ -0.43
ACTN1-204ENST00000438964 HAVCR2Q8TDQ0 301 aa12.37□□□□□ -0.43
ACTN1-204ENST00000438964 THEM6Q8WUY1 208 aa12.37□□□□□ -0.43
ACTN1-204ENST00000438964 TNFAIP8L1Q8WVP5 186 aa12.37□□□□□ -0.43
ACTN1-204ENST00000438964 CDS1Q92903 461 aa12.37□□□□□ -0.43
ACTN1-204ENST00000438964 SLC25A38Q96DW6 304 aa12.37□□□□□ -0.43
ACTN1-204ENST00000438964 WDR13Q9H1Z4 485 aa12.37□□□□□ -0.43
ACTN1-204ENST00000438964 ANKRD19PQ9H560 264 aa12.37□□□□□ -0.43
ACTN1-204ENST00000438964 FBXO34Q9NWN3 711 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms