RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 LCMT2O60294 686 aaKnown RBP6.94□□□□□ -1.3
CPSF6-202ENST00000435070 IFNA4P05014 189 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 GYPBP06028 91 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 VSIG10L2P0DP72 767 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 PRG2P13727 222 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 RORAP35398 523 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 RNF144AP50876 292 aaPredicted RBP6.94□□□□□ -1.3
CPSF6-202ENST00000435070 HCCSP53701 268 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 FCRLAQ7L513 359 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 TRAPPC5Q8IUR0 188 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 DUSP19Q8WTR2 217 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 SMIM4Q8WVI0 70 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 GHSRQ92847 366 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 ARSGQ96EG1 525 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 GAL3ST1Q99999 423 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 ZNF230Q9UIE0 474 aaPredicted RBP6.94□□□□□ -1.3
CPSF6-202ENST00000435070 SCML2Q9UQR0 700 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 MEX3AA1L020 520 aaKnown RBP6.94□□□□□ -1.3
CPSF6-202ENST00000435070 OR6C76A6NM76 312 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 EFCAB7A8K855 629 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 OAZ2O95190 189 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 SLC16A8O95907 504 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 TGIF1Q15583 401 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 ACER2Q5QJU3 275 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 FAM109BQ6ICB4 259 aaPredicted RBP6.94□□□□□ -1.3
CPSF6-202ENST00000435070 UNQ6126/PRO20091Q6UXV3 157 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 SLC9B2Q86UD5 537 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 OR6V1Q8N148 313 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 CYB561A3Q8NBI2 242 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 PAQR8Q8TEZ7 354 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 AUTS2Q8WXX7 1259 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 NEIL2Q969S2 332 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 SEC22AQ96IW7 307 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 ARL5BQ96KC2 179 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 C4orf36Q96KX1 117 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 SAMD8Q96LT4 415 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 ZNF334Q9HCZ1 680 aaPredicted RBP6.94□□□□□ -1.3
CPSF6-202ENST00000435070 ZDHHC4Q9NPG8 344 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 TRIM36Q9NQ86 728 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 SMIM35A0A1B0GVV1 85 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 LIPCP11150 499 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 MAT2AP31153 395 aaKnown RBP6.93□□□□□ -1.3
CPSF6-202ENST00000435070 FABP9Q0Z7S8 132 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 BIKQ13323 160 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 LIPJQ5W064 366 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 NAXDQ8IW45 347 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 OR10G6Q8NH81 332 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 ZNF607Q96SK3 696 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 ENKD1Q9H0I2 346 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 FBXO44Q9H4M3 255 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 EQTNQ9NQ60 294 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 TUBG2Q9NRH3 451 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 ATXN7L1Q9ULK2 861 aaPredicted RBP6.93□□□□□ -1.3
CPSF6-202ENST00000435070 CAMK2AQ9UQM7 478 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 ENTPD4Q9Y227 616 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 FLRT2O43155 660 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 ADCYAP1P18509 176 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 EPHA4P54764 986 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 B4GALNT1Q00973 533 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 SLBPQ14493 270 aaKnown RBP eCLIP6.93□□□□□ -1.3
CPSF6-202ENST00000435070 TRAM2Q15035 370 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 OR2W3Q7Z3T1 314 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 TMED4Q7Z7H5 227 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 APOBEC4Q8WW27 367 aaKnown RBP6.93□□□□□ -1.3
CPSF6-202ENST00000435070 SYNPO2LQ9H987 977 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 MAN2C1Q9NTJ4 1040 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 TMEM202A6NGA9 273 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 SMAD6O43541 496 aaKnown RBP6.93□□□□□ -1.3
CPSF6-202ENST00000435070 FADS1O60427 444 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 SNAPC5O75971 98 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 DDNO94850 711 aaPredicted RBP6.93□□□□□ -1.3
CPSF6-202ENST00000435070 SPAM1P38567 509 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 DYRK1AQ13627 763 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 ETV3LQ6ZN32 361 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 SSX6Q7RTT6 188 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 DEFB132Q7Z7B7 95 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 EIF4E3Q8N5X7 224 aaKnown RBP6.93□□□□□ -1.3
CPSF6-202ENST00000435070 POGLUT1Q8NBL1 392 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 UROC1Q96N76 676 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 FKRPQ9H9S5 495 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 C2orf42Q9NWW7 574 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 TAS2R5Q9NYW4 299 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 MARK1Q9P0L2 795 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 FAM96BQ9Y3D0 163 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 OTOFQ9HC10 1997 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 A0A1B0GV90 55 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 OR10H2O60403 315 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 GREM1O60565 184 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 STX11O75558 287 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 GP1BAP07359 652 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 RAB5BP61020 215 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 FZD5Q13467 585 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 NDUFAF6Q330K2 333 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 YOD1Q5VVQ6 348 aaPredicted RBP6.93□□□□□ -1.3
CPSF6-202ENST00000435070 CYB5R2Q6BCY4 276 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 USP53Q70EK8 1073 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 FAM71CQ8NEG0 241 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 OR51L1Q8NGJ5 315 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 OR8S1Q8NH09 359 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 HCAR1Q9BXC0 346 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms