RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 SPATA31A3Q5VYP0 1347 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 A0A0D9SFI3 127 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 SAP18O00422 153 aaKnown RBP4.99□□□□□ -1.61
PTPN4-203ENST00000430976 SLC16A5O15375 505 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 GRID2O43424 1007 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 TNFSF12O43508 249 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 CSO75390 466 aaKnown RBP4.99□□□□□ -1.61
PTPN4-203ENST00000430976 UPK1BO75841 260 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 TRUB2O95900 331 aaKnown RBP4.99□□□□□ -1.61
PTPN4-203ENST00000430976 LIPCP11150 499 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 MMP9P14780 707 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 CD44P16070 742 aaKnown RBP4.99□□□□□ -1.61
PTPN4-203ENST00000430976 PPP2CBP62714 309 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 PPIAP62937 165 aaKnown RBP4.99□□□□□ -1.61
PTPN4-203ENST00000430976 PPP2CAP67775 309 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 MAD2L1BPQ15013 274 aaPredicted RBP4.99□□□□□ -1.61
PTPN4-203ENST00000430976 CYP51A1Q16850 503 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 ELOA3BQ3SY89 546 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 ACSM3Q53FZ2 586 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 DNM1P34Q6PK57 102 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 ZNF841Q6ZN19 808 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 TMEM135Q86UB9 458 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 ZNF440Q8IYI8 595 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 BEND2Q8NDZ0 799 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 ELOA3Q8NG57 546 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 OR6K6Q8NGW6 343 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 OR5K1Q8NHB7 308 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 IGDCC4Q8TDY8 1250 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 ASB13Q8WXK3 278 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 SLC7A6Q92536 515 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 LMLNQ96KR4 655 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 ATF6BQ99941 703 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 GLIS2Q9BZE0 524 aaPredicted RBP4.99□□□□□ -1.61
PTPN4-203ENST00000430976 SSU72Q9NP77 194 aaKnown RBP4.99□□□□□ -1.61
PTPN4-203ENST00000430976 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.99□□□□□ -1.61
PTPN4-203ENST00000430976 OLAHQ9NV23 265 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 OPTCQ9UBM4 332 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 OR10H1Q9Y4A9 318 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 MYH1P12882 1939 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 NPHP4O75161 1426 aaPredicted RBP4.99□□□□□ -1.61
PTPN4-203ENST00000430976 NPIPB13A6NJU9 1138 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 CGB1A6NKQ9 187 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 ZNF726A6NNF4 738 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 NPIPB4C9JG80 1138 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 YIF1AO95070 293 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 TSPAN12O95859 305 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 IFNA17P01571 189 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 MUC1P15941 1255 aaPredicted RBP4.99□□□□□ -1.61
PTPN4-203ENST00000430976 CYP7A1P22680 504 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 PRDX2P32119 198 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 BMP8BP34820 402 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 CNR2P34972 360 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 IFNGR2P38484 337 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 GATA4P43694 442 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 MTNR1AP48039 350 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 TNFSF10P50591 281 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 SNU13P55769 128 aaKnown RBP4.99□□□□□ -1.61
PTPN4-203ENST00000430976 SUMO1P63165 101 aaKnown RBP4.99□□□□□ -1.61
PTPN4-203ENST00000430976 ARG2P78540 354 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 CRYZQ08257 329 aaKnown RBP4.99□□□□□ -1.61
PTPN4-203ENST00000430976 PTP4A2Q12974 167 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 GAGE1Q13065 139 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 ZNF239Q16600 458 aaKnown RBP4.99□□□□□ -1.61
PTPN4-203ENST00000430976 TMEM268Q5VZI3 342 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 FAAP20Q6NZ36 180 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 TEX261Q6UWH6 196 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 LINGO4Q6UY18 593 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 BMP8AQ7Z5Y6 402 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 PIGZQ86VD9 579 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 PDZD9Q8IXQ8 264 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 FAM71AQ8IYT1 594 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 CMTM8Q8IZV2 173 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 MRPL50Q8N5N7 158 aaKnown RBP4.99□□□□□ -1.61
PTPN4-203ENST00000430976 RNF152Q8N8N0 203 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 MFSD8Q8NHS3 518 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 CENPNQ96H22 339 aaPredicted RBP4.99□□□□□ -1.61
PTPN4-203ENST00000430976 OR52B2Q96RD2 323 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 SIGMAR1Q99720 223 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 DPH2Q9BQC3 489 aaPredicted RBP4.99□□□□□ -1.61
PTPN4-203ENST00000430976 MCRIP2Q9BUT9 160 aaKnown RBP4.99□□□□□ -1.61
PTPN4-203ENST00000430976 SHARPINQ9H0F6 387 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 MED28Q9H204 178 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 MMP28Q9H239 520 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 PRDM13Q9H4Q3 707 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 TMEM134Q9H6X4 195 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 MANSC1Q9H8J5 431 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 CALHM2Q9HA72 323 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 INPP5EQ9NRR6 644 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 THSD1Q9NS62 852 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 THYN1Q9P016 225 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 SLCO3A1Q9UIG8 710 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 FKBPLQ9UIM3 349 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 SCP2D1Q9UJQ7 156 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 PCDHB7Q9Y5E2 793 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 TNFRSF18Q9Y5U5 241 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 U3KQ87 197 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 LMTK3Q96Q04 1460 aa4.99□□□□□ -1.61
PTPN4-203ENST00000430976 GFYI3L273 518 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 FARS2O95363 451 aaKnown RBP4.98□□□□□ -1.61
PTPN4-203ENST00000430976 C1QCP02747 245 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms