RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 SSNA1O43805 119 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 GREM1O60565 184 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 MT-ND4LP03901 98 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 NPPBP16860 134 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 CSNK1DP48730 415 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 AKR1D1P51857 326 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 CCDC85BQ15834 202 aaPredicted RBP4.76□□□□□ -1.65
RIF1-203ENST00000428287 VWA2Q5GFL6 755 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 ZNF697Q5TEC3 545 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 TPRG1Q6ZUI0 275 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 C6orf120Q7Z4R8 191 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 ZNF546Q86UE3 836 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 SYS1Q8N2H4 156 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 TMEM169Q96HH4 297 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 IER2Q9BTL4 223 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 SAV1Q9H4B6 383 aaPredicted RBP4.76□□□□□ -1.65
RIF1-203ENST00000428287 GPBP1L1Q9HC44 474 aaPredicted RBP4.76□□□□□ -1.65
RIF1-203ENST00000428287 SLC35C2Q9NQQ7 365 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 MAFFQ9ULX9 164 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 ARGFXA6NJG6 315 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 ARHGEF33A8MVX0 844 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 LGALS8O00214 317 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 SLC2A1P11166 492 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 ZNF44P15621 663 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 ART1P52961 327 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 CCDC157Q569K6 752 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 CHST9Q7L1S5 443 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 ABHD13Q7L211 337 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 SERPINA12Q8IW75 414 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 MEIOBQ8N635 442 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 ASZ1Q8WWH4 475 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 SMPDL3AQ92484 453 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 MALSU1Q96EH3 234 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 MFFQ9GZY8 342 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 SPRTNQ9H040 489 aaPredicted RBP4.76□□□□□ -1.65
RIF1-203ENST00000428287 RHBGQ9H310 441 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 SLC2A8Q9NY64 477 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 TAS2R10Q9NYW0 307 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 TAS2R3Q9NYW6 316 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 TSR3Q9UJK0 312 aaKnown RBP4.76□□□□□ -1.65
RIF1-203ENST00000428287 PRAMEF2O60811 474 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 RGS9O75916 674 aaPredicted RBP4.76□□□□□ -1.65
RIF1-203ENST00000428287 ALPIP09923 528 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 PTGFRP43088 359 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 DUSP4Q13115 394 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 SNTB1Q13884 538 aaKnown RBP4.76□□□□□ -1.65
RIF1-203ENST00000428287 GANABQ14697 944 aaKnown RBP4.76□□□□□ -1.65
RIF1-203ENST00000428287 ADNP2Q6IQ32 1131 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 PAQR4Q8N4S7 273 aaPredicted RBP4.76□□□□□ -1.65
RIF1-203ENST00000428287 SLC25A28Q96A46 364 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 MIEF1Q9NQG6 463 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 STOX2Q9P2F5 926 aaPredicted RBP4.76□□□□□ -1.65
RIF1-203ENST00000428287 MBD1Q9UIS9 605 aaPredicted RBP4.76□□□□□ -1.65
RIF1-203ENST00000428287 UPK3BL1B0FP48 263 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 UPK3BL2E5RIL1 263 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 ZNF821O75541 412 aaPredicted RBP4.76□□□□□ -1.65
RIF1-203ENST00000428287 FAM157CP0CG43 387 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 SLC25A4P12235 298 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 TEAD1P28347 426 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 STAT5AP42229 794 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 SPINT3P49223 89 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 TWF1Q12792 350 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 PRAMEF19Q5SWL8 479 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 PRAMEF18Q5VWM3 479 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 BEND4Q6ZU67 534 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 C1QL4Q86Z23 238 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 RBM45Q8IUH3 476 aaKnown RBP4.76□□□□□ -1.65
RIF1-203ENST00000428287 DCAF4L2Q8NA75 395 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 C17orf47Q8NEP4 570 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 LYPD6BQ8NI32 183 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 OR5P2Q8WZ92 322 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 OR1F2PQ96R84 312 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 PAPOLGQ9BWT3 736 aaKnown RBP4.76□□□□□ -1.65
RIF1-203ENST00000428287 ISG20L2Q9H9L3 353 aaKnown RBP4.76□□□□□ -1.65
RIF1-203ENST00000428287 CMC2Q9NRP2 79 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 ZZEF1O43149 2961 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 TRAV14DV4A0A0A6YYC5 116 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 RNF13O43567 381 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 EIF3GO75821 320 aaKnown RBP eCLIP4.76□□□□□ -1.65
RIF1-203ENST00000428287 MOCS2O96007 188 aaPredicted RBP4.76□□□□□ -1.65
RIF1-203ENST00000428287 PAK4O96013 591 aaPredicted RBP4.76□□□□□ -1.65
RIF1-203ENST00000428287 ABCD3P28288 659 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 PDHA2P29803 388 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 GPX4P36969 197 aaPredicted RBP4.76□□□□□ -1.65
RIF1-203ENST00000428287 CSKP41240 450 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 TMEM115Q12893 351 aaPredicted RBP4.76□□□□□ -1.65
RIF1-203ENST00000428287 SWI5Q1ZZU3 235 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 ACSM3Q53FZ2 586 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 HES5Q5TA89 166 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 PRAMEF13Q5VWM6 474 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 CHMP1BQ7LBR1 199 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 OR2T33Q8NG76 320 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 PHOSPHO2Q8TCD6 241 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 BRIX1Q8TDN6 353 aaKnown RBP4.76□□□□□ -1.65
RIF1-203ENST00000428287 CXorf40AQ8TE69 158 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 DNAJB3Q8WWF6 145 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 MIB2Q96AX9 1013 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 MRPL38Q96DV4 380 aaKnown RBP4.76□□□□□ -1.65
RIF1-203ENST00000428287 WDR89Q96FK6 387 aaPredicted RBP4.76□□□□□ -1.65
RIF1-203ENST00000428287 TMED9Q9BVK6 235 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms