RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 SPNS3Q6ZMD2 512 aa16.33■□□□□ 0.2
SMARCAL1-205ENST00000425815 STAC2Q6ZMT1 411 aa16.33■□□□□ 0.2
SMARCAL1-205ENST00000425815 TMPPEQ6ZT21 453 aa16.33■□□□□ 0.2
SMARCAL1-205ENST00000425815 VRK2Q86Y07 508 aa16.33■□□□□ 0.2
SMARCAL1-205ENST00000425815 CMIPQ8IY22 773 aa16.33■□□□□ 0.2
SMARCAL1-205ENST00000425815 ZNF563Q8TA94 476 aa16.33■□□□□ 0.2
SMARCAL1-205ENST00000425815 DYDC1Q8WWB3 177 aa16.33■□□□□ 0.2
SMARCAL1-205ENST00000425815 OR5B2Q96R09 309 aa16.33■□□□□ 0.2
SMARCAL1-205ENST00000425815 RSPO3Q9BXY4 272 aaPredicted RBP16.33■□□□□ 0.2
SMARCAL1-205ENST00000425815 C12orf49Q9H741 205 aa16.33■□□□□ 0.2
SMARCAL1-205ENST00000425815 RLIMQ9NVW2 624 aa16.33■□□□□ 0.2
SMARCAL1-205ENST00000425815 C6orf203Q9P0P8 240 aaPredicted RBP16.33■□□□□ 0.2
SMARCAL1-205ENST00000425815 CHST2Q9Y4C5 530 aa16.33■□□□□ 0.2
SMARCAL1-205ENST00000425815 CASKO14936 926 aa16.32■□□□□ 0.2
SMARCAL1-205ENST00000425815 SMAD9O15198 467 aaKnown RBP16.32■□□□□ 0.2
SMARCAL1-205ENST00000425815 GOSR1O95249 250 aa16.32■□□□□ 0.2
SMARCAL1-205ENST00000425815 DBIP07108 87 aaKnown RBP16.32■□□□□ 0.2
SMARCAL1-205ENST00000425815 THBDP07204 575 aa16.32■□□□□ 0.2
SMARCAL1-205ENST00000425815 PABPC4LP0CB38 370 aaKnown RBP16.32■□□□□ 0.2
SMARCAL1-205ENST00000425815 SLC7A1P30825 629 aa16.32■□□□□ 0.2
SMARCAL1-205ENST00000425815 DSTNP60981 165 aa16.32■□□□□ 0.2
SMARCAL1-205ENST00000425815 RNPS1Q15287 305 aaKnown RBP16.32■□□□□ 0.2
SMARCAL1-205ENST00000425815 RGNQ15493 299 aa16.32■□□□□ 0.2
SMARCAL1-205ENST00000425815 PAGE3Q5JUK9 113 aa16.32■□□□□ 0.2
SMARCAL1-205ENST00000425815 LRIF1Q5T3J3 769 aa16.32■□□□□ 0.2
SMARCAL1-205ENST00000425815 MRPL2Q5T653 305 aaKnown RBP16.32■□□□□ 0.2
SMARCAL1-205ENST00000425815 GRINAQ7Z429 371 aa16.32■□□□□ 0.2
SMARCAL1-205ENST00000425815 GOLGA6L1Q8N7Z2 621 aa16.32■□□□□ 0.2
SMARCAL1-205ENST00000425815 WDR60Q8WVS4 1066 aa16.32■□□□□ 0.2
SMARCAL1-205ENST00000425815 NINJ1Q92982 152 aa16.32■□□□□ 0.2
SMARCAL1-205ENST00000425815 THOC1Q96FV9 657 aaKnown RBP16.32■□□□□ 0.2
SMARCAL1-205ENST00000425815 ARL5BQ96KC2 179 aa16.32■□□□□ 0.2
SMARCAL1-205ENST00000425815 PSD2Q9BQI7 771 aa16.32■□□□□ 0.2
SMARCAL1-205ENST00000425815 KLHL4Q9C0H6 718 aa16.32■□□□□ 0.2
SMARCAL1-205ENST00000425815 SERINC1Q9NRX5 453 aa16.32■□□□□ 0.2
SMARCAL1-205ENST00000425815 CCDC167Q9P0B6 97 aa16.32■□□□□ 0.2
SMARCAL1-205ENST00000425815 KLHL13Q9P2N7 655 aa16.32■□□□□ 0.2
SMARCAL1-205ENST00000425815 P2RX2Q9UBL9 471 aa16.32■□□□□ 0.2
SMARCAL1-205ENST00000425815 PLEKHA6Q9Y2H5 1048 aa16.32■□□□□ 0.2
SMARCAL1-205ENST00000425815 MPDZO75970 2070 aa16.31■□□□□ 0.2
SMARCAL1-205ENST00000425815 A0A096LPI6 279 aa16.31■□□□□ 0.2
SMARCAL1-205ENST00000425815 CLIC1O00299 241 aa16.31■□□□□ 0.2
SMARCAL1-205ENST00000425815 BCHEP06276 602 aa16.31■□□□□ 0.2
SMARCAL1-205ENST00000425815 YES1P07947 543 aa16.31■□□□□ 0.2
SMARCAL1-205ENST00000425815 BMP2P12643 396 aa16.31■□□□□ 0.2
SMARCAL1-205ENST00000425815 IL7RP16871 459 aa16.31■□□□□ 0.2
SMARCAL1-205ENST00000425815 CRYGSP22914 178 aa16.31■□□□□ 0.2
SMARCAL1-205ENST00000425815 LOXP28300 417 aaPredicted RBP16.31■□□□□ 0.2
SMARCAL1-205ENST00000425815 ACAA2P42765 397 aaKnown RBP16.31■□□□□ 0.2
SMARCAL1-205ENST00000425815 DIO1P49895 249 aa16.31■□□□□ 0.2
SMARCAL1-205ENST00000425815 ATP4BP51164 291 aa16.31■□□□□ 0.2
SMARCAL1-205ENST00000425815 ART1P52961 327 aa16.31■□□□□ 0.2
SMARCAL1-205ENST00000425815 SYT14P1Q58G82 188 aa16.31■□□□□ 0.2
SMARCAL1-205ENST00000425815 RPS26P11Q5JNZ5 115 aaPredicted RBP16.31■□□□□ 0.2
SMARCAL1-205ENST00000425815 TFAP2EQ6VUC0 442 aa16.31■□□□□ 0.2
SMARCAL1-205ENST00000425815 C10orf111Q8N326 155 aa16.31■□□□□ 0.2
SMARCAL1-205ENST00000425815 SLC43A2Q8N370 569 aa16.31■□□□□ 0.2
SMARCAL1-205ENST00000425815 CLIP4Q8N3C7 705 aa16.31■□□□□ 0.2
SMARCAL1-205ENST00000425815 OR52P1PQ8NH57 321 aa16.31■□□□□ 0.2
SMARCAL1-205ENST00000425815 SPDL1Q96EA4 605 aa16.31■□□□□ 0.2
SMARCAL1-205ENST00000425815 TMEM19Q96HH6 336 aa16.31■□□□□ 0.2
SMARCAL1-205ENST00000425815 REXO5Q96IC2 774 aaKnown RBP16.31■□□□□ 0.2
SMARCAL1-205ENST00000425815 CXXC4Q9H2H0 198 aa16.31■□□□□ 0.2
SMARCAL1-205ENST00000425815 BCO1Q9HAY6 547 aa16.31■□□□□ 0.2
SMARCAL1-205ENST00000425815 GP6Q9HCN6 339 aa16.31■□□□□ 0.2
SMARCAL1-205ENST00000425815 CHRNA9Q9UGM1 479 aa16.31■□□□□ 0.2
SMARCAL1-205ENST00000425815 HIVEP1P15822 2718 aa16.31■□□□□ 0.2
SMARCAL1-205ENST00000425815 HEATR5AQ86XA9 2040 aa16.3■□□□□ 0.2
SMARCAL1-205ENST00000425815 TRBV5-3A0A0A0MS03 114 aa16.3■□□□□ 0.2
SMARCAL1-205ENST00000425815 CDHR4A6H8M9 788 aa16.3■□□□□ 0.2
SMARCAL1-205ENST00000425815 ZNF814B7Z6K7 855 aa16.3■□□□□ 0.2
SMARCAL1-205ENST00000425815 FAAHO00519 579 aa16.3■□□□□ 0.2
SMARCAL1-205ENST00000425815 CYTIPO60759 359 aa16.3■□□□□ 0.2
SMARCAL1-205ENST00000425815 GCM2O75603 506 aaPredicted RBP16.3■□□□□ 0.2
SMARCAL1-205ENST00000425815 EDNRAP25101 427 aa16.3■□□□□ 0.2
SMARCAL1-205ENST00000425815 STX1BP61266 288 aa16.3■□□□□ 0.2
SMARCAL1-205ENST00000425815 EPS8Q12929 822 aa16.3■□□□□ 0.2
SMARCAL1-205ENST00000425815 TMEM201Q5SNT2 666 aa16.3■□□□□ 0.2
SMARCAL1-205ENST00000425815 ZNF836Q6ZNA1 936 aa16.3■□□□□ 0.2
SMARCAL1-205ENST00000425815 BEND4Q6ZU67 534 aa16.3■□□□□ 0.2
SMARCAL1-205ENST00000425815 PEX5LQ8IYB4 626 aa16.3■□□□□ 0.2
SMARCAL1-205ENST00000425815 GABRG1Q8N1C3 465 aa16.3■□□□□ 0.2
SMARCAL1-205ENST00000425815 STON2Q8WXE9 905 aa16.3■□□□□ 0.2
SMARCAL1-205ENST00000425815 MAL2Q969L2 176 aa16.3■□□□□ 0.2
SMARCAL1-205ENST00000425815 ZNF775Q96BV0 537 aaPredicted RBP16.3■□□□□ 0.2
SMARCAL1-205ENST00000425815 DNAJA3Q96EY1 480 aa16.3■□□□□ 0.2
SMARCAL1-205ENST00000425815 MED18Q9BUE0 208 aa16.3■□□□□ 0.2
SMARCAL1-205ENST00000425815 OR11A1Q9GZK7 315 aa16.3■□□□□ 0.2
SMARCAL1-205ENST00000425815 ADAM19Q9H013 955 aa16.3■□□□□ 0.2
SMARCAL1-205ENST00000425815 ZNF385DQ9H6B1 395 aa16.3■□□□□ 0.2
SMARCAL1-205ENST00000425815 ZNF446Q9NWS9 450 aa16.3■□□□□ 0.2
SMARCAL1-205ENST00000425815 VAPAQ9P0L0 249 aa16.3■□□□□ 0.2
SMARCAL1-205ENST00000425815 OSGIN1Q9UJX0 560 aa16.3■□□□□ 0.2
SMARCAL1-205ENST00000425815 ANKRD17O75179 2603 aaKnown RBP16.29■□□□□ 0.2
SMARCAL1-205ENST00000425815 TMEM72A0PK05 275 aa16.29■□□□□ 0.2
SMARCAL1-205ENST00000425815 CFAP73A6NFT4 308 aa16.29■□□□□ 0.2
SMARCAL1-205ENST00000425815 SULT2B1O00204 365 aa16.29■□□□□ 0.2
SMARCAL1-205ENST00000425815 NR5A2O00482 541 aa16.29■□□□□ 0.2
SMARCAL1-205ENST00000425815 KLF4O43474 513 aa16.29■□□□□ 0.2
SMARCAL1-205ENST00000425815 EDF1O60869 148 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms