RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 CT62P0C5K7 136 aa9.86□□□□□ -0.83
CUX1-205ENST00000425244 SMIM10L1P0DMW3 83 aa9.86□□□□□ -0.83
CUX1-205ENST00000425244 PSKH1P11801 424 aa9.86□□□□□ -0.83
CUX1-205ENST00000425244 NID1P14543 1247 aa9.86□□□□□ -0.83
CUX1-205ENST00000425244 FXYD6P3P58550 94 aa9.86□□□□□ -0.83
CUX1-205ENST00000425244 QPRTQ15274 297 aa9.86□□□□□ -0.83
CUX1-205ENST00000425244 DEFB110Q30KQ9 67 aa9.86□□□□□ -0.83
CUX1-205ENST00000425244 IDNKQ5T6J7 187 aa9.86□□□□□ -0.83
CUX1-205ENST00000425244 VASNQ6EMK4 673 aa9.86□□□□□ -0.83
CUX1-205ENST00000425244 ZAR1Q86SH2 424 aa9.86□□□□□ -0.83
CUX1-205ENST00000425244 GID4Q8IVV7 300 aa9.86□□□□□ -0.83
CUX1-205ENST00000425244 CDK20Q8IZL9 346 aa9.86□□□□□ -0.83
CUX1-205ENST00000425244 OR52N1Q8NH53 320 aa9.86□□□□□ -0.83
CUX1-205ENST00000425244 CHAC2Q8WUX2 184 aa9.86□□□□□ -0.83
CUX1-205ENST00000425244 BPIFA2Q96DR5 249 aa9.86□□□□□ -0.83
CUX1-205ENST00000425244 SMIM10Q96HG1 83 aa9.86□□□□□ -0.83
CUX1-205ENST00000425244 PCED1AQ9H1Q7 454 aa9.86□□□□□ -0.83
CUX1-205ENST00000425244 IL21RQ9HBE5 538 aa9.86□□□□□ -0.83
CUX1-205ENST00000425244 POT1Q9NUX5 634 aa9.86□□□□□ -0.83
CUX1-205ENST00000425244 BOLA1Q9Y3E2 137 aa9.86□□□□□ -0.83
CUX1-205ENST00000425244 SIRT4Q9Y6E7 314 aaPredicted RBP9.86□□□□□ -0.83
CUX1-205ENST00000425244 TMEM131Q92545 1883 aa9.85□□□□□ -0.83
CUX1-205ENST00000425244 UNC13CQ8NB66 2214 aa9.85□□□□□ -0.83
CUX1-205ENST00000425244 KIR2DS5A0A0G2JLQ3 304 aa9.85□□□□□ -0.83
CUX1-205ENST00000425244 A0A0G2JNG1 304 aa9.85□□□□□ -0.83
CUX1-205ENST00000425244 CDHR4A6H8M9 788 aa9.85□□□□□ -0.83
CUX1-205ENST00000425244 FAM86C2PA6NEL3 165 aa9.85□□□□□ -0.83
CUX1-205ENST00000425244 B4DXG7 233 aa9.85□□□□□ -0.83
CUX1-205ENST00000425244 KIR2DS3K7RE56 304 aa9.85□□□□□ -0.83
CUX1-205ENST00000425244 RNF13O43567 381 aa9.85□□□□□ -0.83
CUX1-205ENST00000425244 ICMTO60725 284 aa9.85□□□□□ -0.83
CUX1-205ENST00000425244 GYPBP06028 91 aa9.85□□□□□ -0.83
CUX1-205ENST00000425244 THBS1P07996 1170 aa9.85□□□□□ -0.83
CUX1-205ENST00000425244 CLUP10909 449 aa9.85□□□□□ -0.83
CUX1-205ENST00000425244 KIR2DL3P43628 341 aa9.85□□□□□ -0.83
CUX1-205ENST00000425244 KIR2DS5Q14953 304 aa9.85□□□□□ -0.83
CUX1-205ENST00000425244 CDONQ4KMG0 1287 aa9.85□□□□□ -0.83
CUX1-205ENST00000425244 IL20RBQ6UXL0 311 aa9.85□□□□□ -0.83
CUX1-205ENST00000425244 MEPCEQ7L2J0 689 aaKnown RBP9.85□□□□□ -0.83
CUX1-205ENST00000425244 VWA5B2Q8N398 1253 aa9.85□□□□□ -0.83
CUX1-205ENST00000425244 ARL14Q8N4G2 192 aa9.85□□□□□ -0.83
CUX1-205ENST00000425244 CSNK1A1LQ8N752 337 aa9.85□□□□□ -0.83
CUX1-205ENST00000425244 CDRT4Q8N9R6 151 aa9.85□□□□□ -0.83
CUX1-205ENST00000425244 GALNT6Q8NCL4 622 aa9.85□□□□□ -0.83
CUX1-205ENST00000425244 TOR1AIP2Q8NFQ8 470 aa9.85□□□□□ -0.83
CUX1-205ENST00000425244 OR2I1PQ8NGU4 316 aa9.85□□□□□ -0.83
CUX1-205ENST00000425244 BRIX1Q8TDN6 353 aaKnown RBP9.85□□□□□ -0.83
CUX1-205ENST00000425244 ST6GAL2Q96JF0 529 aa9.85□□□□□ -0.83
CUX1-205ENST00000425244 DEPDC7Q96QD5 511 aa9.85□□□□□ -0.83
CUX1-205ENST00000425244 SLC38A3Q99624 504 aa9.85□□□□□ -0.83
CUX1-205ENST00000425244 RNF32Q9H0A6 362 aa9.85□□□□□ -0.83
CUX1-205ENST00000425244 B3GAT2Q9NPZ5 323 aa9.85□□□□□ -0.83
CUX1-205ENST00000425244 ZNF223Q9UK11 482 aaPredicted RBP9.85□□□□□ -0.83
CUX1-205ENST00000425244 CLCA3PQ9Y6N3 262 aa9.85□□□□□ -0.83
CUX1-205ENST00000425244 GPR179Q6PRD1 2367 aa9.85□□□□□ -0.83
CUX1-205ENST00000425244 CENPXA8MT69 81 aa9.85□□□□□ -0.83
CUX1-205ENST00000425244 PATE3B3GLJ2 98 aa9.85□□□□□ -0.83
CUX1-205ENST00000425244 PRR23D1E9PI22 279 aaPredicted RBP9.85□□□□□ -0.83
CUX1-205ENST00000425244 GTPBP1O00178 669 aaKnown RBP9.85□□□□□ -0.83
CUX1-205ENST00000425244 OR10H2O60403 315 aa9.85□□□□□ -0.83
CUX1-205ENST00000425244 GPR75O95800 540 aa9.85□□□□□ -0.83
CUX1-205ENST00000425244 PRR23D2P0DMB1 279 aaPredicted RBP9.85□□□□□ -0.83
CUX1-205ENST00000425244 NOS3P29474 1203 aa9.85□□□□□ -0.83
CUX1-205ENST00000425244 CTBP2P56545 445 aa9.85□□□□□ -0.83
CUX1-205ENST00000425244 UBE2IP63279 158 aaKnown RBP9.85□□□□□ -0.83
CUX1-205ENST00000425244 CD83Q01151 205 aa9.85□□□□□ -0.83
CUX1-205ENST00000425244 SLC3A1Q07837 685 aa9.85□□□□□ -0.83
CUX1-205ENST00000425244 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.85□□□□□ -0.831e-6■■■■■ 31.5
CUX1-205ENST00000425244 FAM27D1Q5T7N8 215 aa9.85□□□□□ -0.83
CUX1-205ENST00000425244 FHL5Q5TD97 284 aa9.85□□□□□ -0.83
CUX1-205ENST00000425244 TMEM91Q6ZNR0 172 aa9.85□□□□□ -0.83
CUX1-205ENST00000425244 BMP8AQ7Z5Y6 402 aa9.85□□□□□ -0.83
CUX1-205ENST00000425244 SLC37A3Q8NCC5 494 aa9.85□□□□□ -0.83
CUX1-205ENST00000425244 DNAJA4Q8WW22 397 aaPredicted RBP9.85□□□□□ -0.83
CUX1-205ENST00000425244 SENP5Q96HI0 755 aaPredicted RBP9.85□□□□□ -0.83
CUX1-205ENST00000425244 FRMD6Q96NE9 622 aa9.85□□□□□ -0.83
CUX1-205ENST00000425244 PTCHD1Q96NR3 888 aa9.85□□□□□ -0.83
CUX1-205ENST00000425244 RNF121Q9H920 327 aa9.85□□□□□ -0.83
CUX1-205ENST00000425244 BABAM2Q9NXR7 383 aa9.85□□□□□ -0.83
CUX1-205ENST00000425244 PILRAQ9UKJ1 303 aa9.85□□□□□ -0.83
CUX1-205ENST00000425244 MED31Q9Y3C7 131 aa9.85□□□□□ -0.83
CUX1-205ENST00000425244 FREM2Q5SZK8 3169 aa9.85□□□□□ -0.83
CUX1-205ENST00000425244 CELSR3Q9NYQ7 3312 aa9.85□□□□□ -0.83
CUX1-205ENST00000425244 A0A1B0GVC2 190 aa9.84□□□□□ -0.83
CUX1-205ENST00000425244 A6NIN4 97 aa9.84□□□□□ -0.83
CUX1-205ENST00000425244 OR5K4A6NMS3 321 aa9.84□□□□□ -0.83
CUX1-205ENST00000425244 BHLHE40O14503 412 aa9.84□□□□□ -0.83
CUX1-205ENST00000425244 TNFSF14O43557 240 aa9.84□□□□□ -0.83
CUX1-205ENST00000425244 RDH16O75452 317 aa9.84□□□□□ -0.83
CUX1-205ENST00000425244 CDC123O75794 336 aaPredicted RBP9.84□□□□□ -0.83
CUX1-205ENST00000425244 RGS9O75916 674 aaPredicted RBP9.84□□□□□ -0.83
CUX1-205ENST00000425244 PPP1R3DO95685 299 aa9.84□□□□□ -0.83
CUX1-205ENST00000425244 MAP2K3P46734 347 aa9.84□□□□□ -0.83
CUX1-205ENST00000425244 POU6F2P78424 691 aaPredicted RBP9.84□□□□□ -0.83
CUX1-205ENST00000425244 FOXK2Q01167 660 aa9.84□□□□□ -0.83
CUX1-205ENST00000425244 NKAIN2Q5VXU1 208 aa9.84□□□□□ -0.83
CUX1-205ENST00000425244 ARMC6Q6NXE6 501 aa9.84□□□□□ -0.83
CUX1-205ENST00000425244 MZT2AQ6P582 158 aa9.84□□□□□ -0.83
CUX1-205ENST00000425244 PLET1Q6UQ28 207 aa9.84□□□□□ -0.83
CUX1-205ENST00000425244 PRR23CQ6ZRP0 262 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms