RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 ACTRT2Q8TDY3 377 aa5.41□□□□□ -1.54
SDCBP-203ENST00000424270 RAB1CQ92928 201 aa5.41□□□□□ -1.54
SDCBP-203ENST00000424270 EXOSC8Q96B26 276 aaKnown RBP5.41□□□□□ -1.54
SDCBP-203ENST00000424270 ERP27Q96DN0 273 aa5.41□□□□□ -1.54
SDCBP-203ENST00000424270 BPIFA3Q9BQP9 254 aa5.41□□□□□ -1.54
SDCBP-203ENST00000424270 CD244Q9BZW8 370 aa5.41□□□□□ -1.54
SDCBP-203ENST00000424270 COQ10BQ9H8M1 238 aa5.41□□□□□ -1.54
SDCBP-203ENST00000424270 SLC7A10Q9NS82 523 aa5.41□□□□□ -1.54
SDCBP-203ENST00000424270 SIRT3Q9NTG7 399 aaPredicted RBP5.41□□□□□ -1.54
SDCBP-203ENST00000424270 DDX18Q9NVP1 670 aaKnown RBP5.41□□□□□ -1.54
SDCBP-203ENST00000424270 MALT1Q9UDY8 824 aa5.41□□□□□ -1.54
SDCBP-203ENST00000424270 DCTN4Q9UJW0 460 aa5.41□□□□□ -1.54
SDCBP-203ENST00000424270 ZKSCAN5Q9Y2L8 839 aa5.41□□□□□ -1.54
SDCBP-203ENST00000424270 ACTL7BQ9Y614 415 aa5.41□□□□□ -1.54
SDCBP-203ENST00000424270 PLCE1Q9P212 2302 aa5.41□□□□□ -1.54
SDCBP-203ENST00000424270 RYR2Q92736 4967 aa5.4□□□□□ -1.54
SDCBP-203ENST00000424270 SRRM5B3KS81 715 aa5.4□□□□□ -1.54
SDCBP-203ENST00000424270 K7EPI3 171 aa5.4□□□□□ -1.54
SDCBP-203ENST00000424270 GTPBP1O00178 669 aaKnown RBP5.4□□□□□ -1.54
SDCBP-203ENST00000424270 CLPXO76031 633 aa5.4□□□□□ -1.54
SDCBP-203ENST00000424270 CECR9P0C854 216 aa5.4□□□□□ -1.54
SDCBP-203ENST00000424270 NAT2P11245 290 aa5.4□□□□□ -1.54
SDCBP-203ENST00000424270 PGAM1P18669 254 aa5.4□□□□□ -1.54
SDCBP-203ENST00000424270 MPGP29372 298 aa5.4□□□□□ -1.54
SDCBP-203ENST00000424270 CALCRP30988 508 aa5.4□□□□□ -1.54
SDCBP-203ENST00000424270 GABRA3P34903 492 aa5.4□□□□□ -1.54
SDCBP-203ENST00000424270 GPC1P35052 558 aa5.4□□□□□ -1.54
SDCBP-203ENST00000424270 MAGEA8P43361 318 aa5.4□□□□□ -1.54
SDCBP-203ENST00000424270 PRIM2P49643 509 aa5.4□□□□□ -1.54
SDCBP-203ENST00000424270 CCR4P51679 360 aa5.4□□□□□ -1.54
SDCBP-203ENST00000424270 PSG6Q00889 435 aa5.4□□□□□ -1.54
SDCBP-203ENST00000424270 RELBQ01201 579 aa5.4□□□□□ -1.54
SDCBP-203ENST00000424270 TEKQ02763 1124 aa5.4□□□□□ -1.54
SDCBP-203ENST00000424270 DBPQ10586 325 aaPredicted RBP5.4□□□□□ -1.54
SDCBP-203ENST00000424270 ZNF154Q13106 437 aa5.4□□□□□ -1.54
SDCBP-203ENST00000424270 SELENBP1Q13228 472 aa5.4□□□□□ -1.54
SDCBP-203ENST00000424270 CDK5R2Q13319 367 aa5.4□□□□□ -1.54
SDCBP-203ENST00000424270 CRYMQ14894 314 aa5.4□□□□□ -1.54
SDCBP-203ENST00000424270 MAD2L1BPQ15013 274 aaPredicted RBP5.4□□□□□ -1.54
SDCBP-203ENST00000424270 C4orf48Q5BLP8 95 aa5.4□□□□□ -1.54
SDCBP-203ENST00000424270 SGO1Q5FBB7 561 aa5.4□□□□□ -1.54
SDCBP-203ENST00000424270 TMEM154Q6P9G4 183 aa5.4□□□□□ -1.54
SDCBP-203ENST00000424270 ZNF620Q6ZNG0 422 aa5.4□□□□□ -1.54
SDCBP-203ENST00000424270 VASH1Q7L8A9 365 aaPredicted RBP5.4□□□□□ -1.54
SDCBP-203ENST00000424270 SZRD1Q7Z422 152 aa5.4□□□□□ -1.54
SDCBP-203ENST00000424270 ABHD12BQ7Z5M8 362 aaPredicted RBP5.4□□□□□ -1.54
SDCBP-203ENST00000424270 MISPQ8IVT2 679 aa5.4□□□□□ -1.54
SDCBP-203ENST00000424270 SAMD14Q8IZD0 417 aaPredicted RBP5.4□□□□□ -1.54
SDCBP-203ENST00000424270 SYCE1Q8N0S2 351 aa5.4□□□□□ -1.54
SDCBP-203ENST00000424270 OR7G2Q8NG99 324 aa5.4□□□□□ -1.54
SDCBP-203ENST00000424270 OR4S1Q8NGB4 309 aa5.4□□□□□ -1.54
SDCBP-203ENST00000424270 LINC01006Q8NI28 216 aa5.4□□□□□ -1.54
SDCBP-203ENST00000424270 PHOSPHO1Q8TCT1 267 aa5.4□□□□□ -1.54
SDCBP-203ENST00000424270 ZNF675Q8TD23 568 aa5.4□□□□□ -1.54
SDCBP-203ENST00000424270 GPR151Q8TDV0 419 aa5.4□□□□□ -1.54
SDCBP-203ENST00000424270 ZNF75CPQ92670 426 aaPredicted RBP5.4□□□□□ -1.54
SDCBP-203ENST00000424270 ATP6V1E2Q96A05 226 aa5.4□□□□□ -1.54
SDCBP-203ENST00000424270 PHF21AQ96BD5 680 aa5.4□□□□□ -1.54
SDCBP-203ENST00000424270 LRRC39Q96DD0 335 aa5.4□□□□□ -1.54
SDCBP-203ENST00000424270 DNAJA3Q96EY1 480 aa5.4□□□□□ -1.54
SDCBP-203ENST00000424270 CNRIP1Q96F85 164 aaPredicted RBP5.4□□□□□ -1.54
SDCBP-203ENST00000424270 CHMP6Q96FZ7 201 aa5.4□□□□□ -1.54
SDCBP-203ENST00000424270 MRPL1Q9BYD6 325 aaKnown RBP5.4□□□□□ -1.54
SDCBP-203ENST00000424270 CHIAQ9BZP6 476 aa5.4□□□□□ -1.54
SDCBP-203ENST00000424270 CENPHQ9H3R5 247 aa5.4□□□□□ -1.54
SDCBP-203ENST00000424270 CRLF2Q9HC73 371 aa5.4□□□□□ -1.54
SDCBP-203ENST00000424270 OBP2BQ9NPH6 170 aa5.4□□□□□ -1.54
SDCBP-203ENST00000424270 EQTNQ9NQ60 294 aa5.4□□□□□ -1.54
SDCBP-203ENST00000424270 SERINC1Q9NRX5 453 aa5.4□□□□□ -1.54
SDCBP-203ENST00000424270 SLC6A13Q9NSD5 602 aa5.4□□□□□ -1.54
SDCBP-203ENST00000424270 DECR2Q9NUI1 292 aa5.4□□□□□ -1.54
SDCBP-203ENST00000424270 TMEM45AQ9NWC5 275 aa5.4□□□□□ -1.54
SDCBP-203ENST00000424270 PARPBPQ9NWS1 579 aa5.4□□□□□ -1.54
SDCBP-203ENST00000424270 DUSP13Q9UII6 198 aa5.4□□□□□ -1.54
SDCBP-203ENST00000424270 PURGQ9UJV8 347 aaKnown RBP5.4□□□□□ -1.54
SDCBP-203ENST00000424270 TSC22D4Q9Y3Q8 395 aa5.4□□□□□ -1.54
SDCBP-203ENST00000424270 SOX21Q9Y651 276 aaPredicted RBP5.4□□□□□ -1.54
SDCBP-203ENST00000424270 ARFGEF3Q5TH69 2177 aa5.4□□□□□ -1.55
SDCBP-203ENST00000424270 A0A096LPE4 126 aa5.39□□□□□ -1.55
SDCBP-203ENST00000424270 TRAV40A0A0B4J280 105 aa5.39□□□□□ -1.55
SDCBP-203ENST00000424270 LCE6AA0A183 80 aa5.39□□□□□ -1.55
SDCBP-203ENST00000424270 FAM95CA0A1B0GW59 222 aa5.39□□□□□ -1.55
SDCBP-203ENST00000424270 A0A1W2PPZ6 126 aa5.39□□□□□ -1.55
SDCBP-203ENST00000424270 TMEM129A0AVI4 362 aa5.39□□□□□ -1.55
SDCBP-203ENST00000424270 AGAP5A6NIR3 686 aa5.39□□□□□ -1.55
SDCBP-203ENST00000424270 ALG1L2C9J202 215 aa5.39□□□□□ -1.55
SDCBP-203ENST00000424270 H3BNH8 94 aa5.39□□□□□ -1.55
SDCBP-203ENST00000424270 MFAP3LO75121 409 aa5.39□□□□□ -1.55
SDCBP-203ENST00000424270 ULK1O75385 1050 aa5.39□□□□□ -1.55
SDCBP-203ENST00000424270 DEAF1O75398 565 aaPredicted RBP5.39□□□□□ -1.55
SDCBP-203ENST00000424270 ZNF432O94892 652 aa5.39□□□□□ -1.55
SDCBP-203ENST00000424270 SEMA3DO95025 777 aa5.39□□□□□ -1.55
SDCBP-203ENST00000424270 OXSR1O95747 527 aaPredicted RBP5.39□□□□□ -1.55
SDCBP-203ENST00000424270 LINGO3P0C6S8 592 aa5.39□□□□□ -1.55
SDCBP-203ENST00000424270 IGHV4-38-2P0DP08 117 aa5.39□□□□□ -1.55
SDCBP-203ENST00000424270 MLNP12872 115 aa5.39□□□□□ -1.55
SDCBP-203ENST00000424270 EPORP19235 508 aa5.39□□□□□ -1.55
SDCBP-203ENST00000424270 PAX7P23759 505 aa5.39□□□□□ -1.55
SDCBP-203ENST00000424270 MPIP34949 423 aa5.39□□□□□ -1.55
SDCBP-203ENST00000424270 GP5P40197 560 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms