RNA–Protein interactions for RNA: ENST00000423335.2

SHISA9-201, Transcript of shisa family member 9, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHISA9, Length 4,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA9-201ENST00000423335 PINK1Q9BXM7 581 aa14.04□□□□□ -0.16
SHISA9-201ENST00000423335 TMEM38AQ9H6F2 299 aa14.04□□□□□ -0.16
SHISA9-201ENST00000423335 IER3IP1Q9Y5U9 82 aa14.04□□□□□ -0.16
SHISA9-201ENST00000423335 DICER1Q9UPY3 1922 aaKnown RBP14.04□□□□□ -0.16
SHISA9-201ENST00000423335 TRIM3O75382 744 aaPredicted RBP14.04□□□□□ -0.16
SHISA9-201ENST00000423335 ECDO95905 644 aaPredicted RBP14.04□□□□□ -0.16
SHISA9-201ENST00000423335 ALDOBP05062 364 aa14.04□□□□□ -0.16
SHISA9-201ENST00000423335 SYPP08247 313 aa14.04□□□□□ -0.16
SHISA9-201ENST00000423335 NR0B1P51843 470 aaKnown RBP14.04□□□□□ -0.16
SHISA9-201ENST00000423335 PSPHP78330 225 aa14.04□□□□□ -0.16
SHISA9-201ENST00000423335 FCN2Q15485 313 aa14.04□□□□□ -0.16
SHISA9-201ENST00000423335 ZNF767PQ75MW2 155 aa14.04□□□□□ -0.16
SHISA9-201ENST00000423335 ATCAYQ86WG3 371 aa14.04□□□□□ -0.16
SHISA9-201ENST00000423335 PLPP6Q8IY26 295 aa14.04□□□□□ -0.16
SHISA9-201ENST00000423335 ARL14Q8N4G2 192 aa14.04□□□□□ -0.16
SHISA9-201ENST00000423335 BPIFA2Q96DR5 249 aa14.04□□□□□ -0.16
SHISA9-201ENST00000423335 OPALINQ96PE5 141 aa14.04□□□□□ -0.16
SHISA9-201ENST00000423335 CRB3Q9BUF7 120 aa14.04□□□□□ -0.16
SHISA9-201ENST00000423335 GRHPRQ9UBQ7 328 aa14.04□□□□□ -0.16
SHISA9-201ENST00000423335 PISDQ9UG56 409 aa14.04□□□□□ -0.16
SHISA9-201ENST00000423335 ATG4BQ9Y4P1 393 aa14.04□□□□□ -0.16
SHISA9-201ENST00000423335 OTOFQ9HC10 1997 aa14.04□□□□□ -0.16
SHISA9-201ENST00000423335 C5orf67F2Z3F1 127 aa14.04□□□□□ -0.16
SHISA9-201ENST00000423335 PEX12O00623 359 aa14.04□□□□□ -0.16
SHISA9-201ENST00000423335 CD27P26842 260 aa14.04□□□□□ -0.16
SHISA9-201ENST00000423335 TRIM23P36406 574 aa14.04□□□□□ -0.16
SHISA9-201ENST00000423335 CSNK1G2P78368 415 aa14.04□□□□□ -0.16
SHISA9-201ENST00000423335 ARHGAP19Q14CB8 494 aa14.04□□□□□ -0.16
SHISA9-201ENST00000423335 PYHIN1Q6K0P9 492 aa14.04□□□□□ -0.16
SHISA9-201ENST00000423335 POGLUT1Q8NBL1 392 aa14.04□□□□□ -0.16
SHISA9-201ENST00000423335 OR13C2Q8NGS9 318 aa14.04□□□□□ -0.16
SHISA9-201ENST00000423335 NEURL3Q96EH8 262 aa14.04□□□□□ -0.16
SHISA9-201ENST00000423335 C7orf34Q96L11 122 aa14.04□□□□□ -0.16
SHISA9-201ENST00000423335 ZNF471Q9BX82 626 aaPredicted RBP14.04□□□□□ -0.16
SHISA9-201ENST00000423335 IFT46Q9NQC8 304 aa14.04□□□□□ -0.16
SHISA9-201ENST00000423335 POT1Q9NUX5 634 aa14.04□□□□□ -0.16
SHISA9-201ENST00000423335 MBD2Q9UBB5 411 aa14.04□□□□□ -0.16
SHISA9-201ENST00000423335 SCN5AQ14524 2016 aa14.04□□□□□ -0.16
SHISA9-201ENST00000423335 A0A0G2JMP0 313 aa14.03□□□□□ -0.16
SHISA9-201ENST00000423335 A0A0X1KG70 313 aa14.03□□□□□ -0.16
SHISA9-201ENST00000423335 ARPC1BO15143 372 aaKnown RBP14.03□□□□□ -0.16
SHISA9-201ENST00000423335 YY2O15391 372 aa14.03□□□□□ -0.16
SHISA9-201ENST00000423335 LCMT2O60294 686 aaKnown RBP14.03□□□□□ -0.16
SHISA9-201ENST00000423335 KCNJ13O60928 360 aa14.03□□□□□ -0.16
SHISA9-201ENST00000423335 AIFM1O95831 613 aa14.03□□□□□ -0.16
SHISA9-201ENST00000423335 PLGP00747 810 aaPredicted RBP14.03□□□□□ -0.16
SHISA9-201ENST00000423335 SNTA1Q13424 505 aa14.03□□□□□ -0.16
SHISA9-201ENST00000423335 SMAD2Q15796 467 aaKnown RBP14.03□□□□□ -0.16
SHISA9-201ENST00000423335 KLHL24Q6TFL4 600 aa14.03□□□□□ -0.16
SHISA9-201ENST00000423335 SYT9Q86SS6 491 aa14.03□□□□□ -0.16
SHISA9-201ENST00000423335 SLC16A11Q8NCK7 471 aa14.03□□□□□ -0.16
SHISA9-201ENST00000423335 OR4M2Q8NGB6 313 aa14.03□□□□□ -0.16
SHISA9-201ENST00000423335 CREB3L4Q8TEY5 395 aa14.03□□□□□ -0.16
SHISA9-201ENST00000423335 SMAP2Q8WU79 429 aaPredicted RBP14.03□□□□□ -0.16
SHISA9-201ENST00000423335 TAPBPLQ9BX59 468 aa14.03□□□□□ -0.16
SHISA9-201ENST00000423335 FGF21Q9NSA1 209 aa14.03□□□□□ -0.16
SHISA9-201ENST00000423335 RLFQ13129 1914 aa14.03□□□□□ -0.16
SHISA9-201ENST00000423335 COQ9O75208 318 aa14.03□□□□□ -0.16
SHISA9-201ENST00000423335 F10P00742 488 aa14.03□□□□□ -0.16
SHISA9-201ENST00000423335 SPARCP09486 303 aa14.03□□□□□ -0.16
SHISA9-201ENST00000423335 PTH2RP49190 550 aa14.03□□□□□ -0.16
SHISA9-201ENST00000423335 DUSP3P51452 185 aaPredicted RBP14.03□□□□□ -0.16
SHISA9-201ENST00000423335 FAPQ12884 760 aa14.03□□□□□ -0.16
SHISA9-201ENST00000423335 SQSTM1Q13501 440 aa14.03□□□□□ -0.16
SHISA9-201ENST00000423335 LINC00299Q6ZSB3 139 aa14.03□□□□□ -0.16
SHISA9-201ENST00000423335 PRICKLE2Q7Z3G6 844 aa14.03□□□□□ -0.16
SHISA9-201ENST00000423335 NKAIN4Q8IVV8 208 aa14.03□□□□□ -0.16
SHISA9-201ENST00000423335 UBQLNLQ8IYU4 475 aa14.03□□□□□ -0.16
SHISA9-201ENST00000423335 ZNF101Q8IZC7 436 aa14.03□□□□□ -0.16
SHISA9-201ENST00000423335 TMEM255BQ8WV15 326 aa14.03□□□□□ -0.16
SHISA9-201ENST00000423335 LMF1Q96S06 567 aa14.03□□□□□ -0.16
SHISA9-201ENST00000423335 GABARAPL3Q9BY60 117 aa14.03□□□□□ -0.16
SHISA9-201ENST00000423335 SPTBN1Q01082 2364 aaKnown RBP14.03□□□□□ -0.16
SHISA9-201ENST00000423335 A0A087WUU8 490 aa14.03□□□□□ -0.16
SHISA9-201ENST00000423335 CLEC3AO75596 197 aa14.03□□□□□ -0.16
SHISA9-201ENST00000423335 RFPL3O75679 317 aa14.03□□□□□ -0.16
SHISA9-201ENST00000423335 ZNF432O94892 652 aa14.03□□□□□ -0.16
SHISA9-201ENST00000423335 PLATP00750 562 aa14.03□□□□□ -0.16
SHISA9-201ENST00000423335 GABRA5P31644 462 aa14.03□□□□□ -0.16
SHISA9-201ENST00000423335 FXYD6P3P58550 94 aa14.03□□□□□ -0.16
SHISA9-201ENST00000423335 TSPAN31Q12999 210 aa14.03□□□□□ -0.16
SHISA9-201ENST00000423335 SGCBQ16585 318 aa14.03□□□□□ -0.16
SHISA9-201ENST00000423335 COMMD7Q86VX2 200 aa14.03□□□□□ -0.16
SHISA9-201ENST00000423335 TMEM151BQ8IW70 566 aa14.03□□□□□ -0.16
SHISA9-201ENST00000423335 FBXL6Q8N531 539 aa14.03□□□□□ -0.16
SHISA9-201ENST00000423335 HCAR2Q8TDS4 363 aa14.03□□□□□ -0.16
SHISA9-201ENST00000423335 FOXN4Q96NZ1 517 aa14.03□□□□□ -0.16
SHISA9-201ENST00000423335 MS4A8Q9BY19 250 aa14.03□□□□□ -0.16
SHISA9-201ENST00000423335 BCL2L14Q9BZR8 327 aa14.03□□□□□ -0.16
SHISA9-201ENST00000423335 TMEM185BQ9H7F4 350 aa14.03□□□□□ -0.16
SHISA9-201ENST00000423335 SEC61A2Q9H9S3 476 aa14.03□□□□□ -0.16
SHISA9-201ENST00000423335 CLEC1BQ9P126 229 aa14.03□□□□□ -0.16
SHISA9-201ENST00000423335 ENTPD2Q9Y5L3 495 aa14.03□□□□□ -0.16
SHISA9-201ENST00000423335 PIKFYVEQ9Y2I7 2098 aa14.02□□□□□ -0.16
SHISA9-201ENST00000423335 ZAR1LA6NP61 321 aa14.02□□□□□ -0.16
SHISA9-201ENST00000423335 CREBL2O60519 120 aaPredicted RBP14.02□□□□□ -0.16
SHISA9-201ENST00000423335 OR7A10O76100 309 aa14.02□□□□□ -0.16
SHISA9-201ENST00000423335 CHRNB1P11230 501 aa14.02□□□□□ -0.16
SHISA9-201ENST00000423335 SOX18P35713 384 aa14.02□□□□□ -0.16
SHISA9-201ENST00000423335 BCL6P41182 706 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms