RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 A0A0G2JNJ9 132 aa14.17□□□□□ -0.14
BRAT1-202ENST00000421712 A0A0J9YW62 118 aa14.17□□□□□ -0.14
BRAT1-202ENST00000421712 ELOVL7A1L3X0 281 aa14.17□□□□□ -0.14
BRAT1-202ENST00000421712 CXCL13O43927 109 aa14.17□□□□□ -0.14
BRAT1-202ENST00000421712 NTN1O95631 604 aa14.17□□□□□ -0.14
BRAT1-202ENST00000421712 PRG2P13727 222 aa14.17□□□□□ -0.14
BRAT1-202ENST00000421712 AGAP20933 346 aa14.17□□□□□ -0.14
BRAT1-202ENST00000421712 SHC1P29353 583 aa14.17□□□□□ -0.14
BRAT1-202ENST00000421712 ACAA2P42765 397 aaKnown RBP14.17□□□□□ -0.14
BRAT1-202ENST00000421712 SLC1A3P43003 542 aa14.17□□□□□ -0.14
BRAT1-202ENST00000421712 POLR2HP52434 150 aaKnown RBP14.17□□□□□ -0.14
BRAT1-202ENST00000421712 PCBP3P57721 371 aaKnown RBP14.17□□□□□ -0.14
BRAT1-202ENST00000421712 NCALDP61601 193 aa14.17□□□□□ -0.14
BRAT1-202ENST00000421712 HOXC5Q00444 222 aa14.17□□□□□ -0.14
BRAT1-202ENST00000421712 LIPEQ05469 1076 aa14.17□□□□□ -0.14
BRAT1-202ENST00000421712 DMTNQ08495 405 aa14.17□□□□□ -0.14
BRAT1-202ENST00000421712 PON3Q15166 354 aa14.17□□□□□ -0.14
BRAT1-202ENST00000421712 GLIPR1L2Q4G1C9 344 aa14.17□□□□□ -0.14
BRAT1-202ENST00000421712 WBP2NLQ6ICG8 309 aa14.17□□□□□ -0.14
BRAT1-202ENST00000421712 SEM1Q6ZVN7 128 aa14.17□□□□□ -0.14
BRAT1-202ENST00000421712 MICU2Q8IYU8 434 aa14.17□□□□□ -0.14
BRAT1-202ENST00000421712 FITM2Q8N6M3 262 aa14.17□□□□□ -0.14
BRAT1-202ENST00000421712 C9orf106Q8NAJ2 232 aa14.17□□□□□ -0.14
BRAT1-202ENST00000421712 OR10D3Q8NH80 312 aa14.17□□□□□ -0.14
BRAT1-202ENST00000421712 OSTF1Q92882 214 aa14.17□□□□□ -0.14
BRAT1-202ENST00000421712 TIGARQ9NQ88 270 aa14.17□□□□□ -0.14
BRAT1-202ENST00000421712 PAQR5Q9NXK6 330 aaPredicted RBP14.17□□□□□ -0.14
BRAT1-202ENST00000421712 RPS6KB2Q9UBS0 482 aa14.17□□□□□ -0.14
BRAT1-202ENST00000421712 Q9UFV3 132 aa14.17□□□□□ -0.14
BRAT1-202ENST00000421712 CHST2Q9Y4C5 530 aa14.17□□□□□ -0.14
BRAT1-202ENST00000421712 TMED7-TICAM2A0A0A6YYA0 188 aa14.16□□□□□ -0.14
BRAT1-202ENST00000421712 A0A1W2PNR3 127 aa14.16□□□□□ -0.14
BRAT1-202ENST00000421712 FAM90A27PA6NNH2 459 aa14.16□□□□□ -0.14
BRAT1-202ENST00000421712 FAAHO00519 579 aa14.16□□□□□ -0.14
BRAT1-202ENST00000421712 ADAMDEC1O15204 470 aa14.16□□□□□ -0.14
BRAT1-202ENST00000421712 TOXO94900 526 aa14.16□□□□□ -0.14
BRAT1-202ENST00000421712 CLDN14O95500 239 aa14.16□□□□□ -0.14
BRAT1-202ENST00000421712 IFNA14P01570 189 aa14.16□□□□□ -0.14
BRAT1-202ENST00000421712 TMIGD3P0DMS9 266 aaPredicted RBP14.16□□□□□ -0.14
BRAT1-202ENST00000421712 CXCR1P25024 350 aa14.16□□□□□ -0.14
BRAT1-202ENST00000421712 TACR3P29371 465 aa14.16□□□□□ -0.14
BRAT1-202ENST00000421712 MNAT1P51948 309 aa14.16□□□□□ -0.14
BRAT1-202ENST00000421712 VEZF1Q14119 521 aa14.16□□□□□ -0.14
BRAT1-202ENST00000421712 RNF217Q8TC41 542 aa14.16□□□□□ -0.14
BRAT1-202ENST00000421712 FIG4Q92562 907 aa14.16□□□□□ -0.14
BRAT1-202ENST00000421712 INTS12Q96CB8 462 aaKnown RBP14.16□□□□□ -0.14
BRAT1-202ENST00000421712 NSL1Q96IY1 281 aa14.16□□□□□ -0.14
BRAT1-202ENST00000421712 OR5B2Q96R09 309 aa14.16□□□□□ -0.14
BRAT1-202ENST00000421712 CLCF1Q9UBD9 225 aa14.16□□□□□ -0.14
BRAT1-202ENST00000421712 CHRNA9Q9UGM1 479 aa14.16□□□□□ -0.14
BRAT1-202ENST00000421712 MCTS1Q9ULC4 181 aaKnown RBP14.16□□□□□ -0.14
BRAT1-202ENST00000421712 TMED7Q9Y3B3 224 aa14.16□□□□□ -0.14
BRAT1-202ENST00000421712 KIAA1549Q9HCM3 1950 aa14.15□□□□□ -0.14
BRAT1-202ENST00000421712 MBD3L4A6NDZ8 208 aaPredicted RBP14.15□□□□□ -0.14
BRAT1-202ENST00000421712 MBD3L3A6NE82 208 aaPredicted RBP14.15□□□□□ -0.14
BRAT1-202ENST00000421712 MBD3L5A6NJ08 208 aaPredicted RBP14.15□□□□□ -0.14
BRAT1-202ENST00000421712 PRSS44E7EML9 344 aa14.15□□□□□ -0.14
BRAT1-202ENST00000421712 ETV2O00321 342 aaPredicted RBP14.15□□□□□ -0.14
BRAT1-202ENST00000421712 NME4O00746 187 aa14.15□□□□□ -0.14
BRAT1-202ENST00000421712 GCM2O75603 506 aaPredicted RBP14.15□□□□□ -0.14
BRAT1-202ENST00000421712 RCBTB2O95199 551 aa14.15□□□□□ -0.14
BRAT1-202ENST00000421712 TGM6O95932 706 aa14.15□□□□□ -0.14
BRAT1-202ENST00000421712 CEACAM8P31997 349 aaPredicted RBP14.15□□□□□ -0.14
BRAT1-202ENST00000421712 AGFG1P52594 562 aaKnown RBP14.15□□□□□ -0.14
BRAT1-202ENST00000421712 RGS8P57771 180 aaPredicted RBP14.15□□□□□ -0.14
BRAT1-202ENST00000421712 KRT72Q14CN4 511 aa14.15□□□□□ -0.14
BRAT1-202ENST00000421712 DUSP7Q16829 419 aa14.15□□□□□ -0.14
BRAT1-202ENST00000421712 CTU2Q2VPK5 515 aaKnown RBP14.15□□□□□ -0.14
BRAT1-202ENST00000421712 LRRC23Q53EV4 343 aaPredicted RBP14.15□□□□□ -0.14
BRAT1-202ENST00000421712 SYT14P1Q58G82 188 aa14.15□□□□□ -0.14
BRAT1-202ENST00000421712 FAM91A1Q658Y4 838 aa14.15□□□□□ -0.14
BRAT1-202ENST00000421712 C8orf82Q6P1X6 216 aaPredicted RBP14.15□□□□□ -0.14
BRAT1-202ENST00000421712 CCDC80Q76M96 950 aa14.15□□□□□ -0.14
BRAT1-202ENST00000421712 ADGRG3Q86Y34 549 aa14.15□□□□□ -0.14
BRAT1-202ENST00000421712 GCNT2Q8N0V5 402 aa14.15□□□□□ -0.14
BRAT1-202ENST00000421712 OR52E4Q8NGH9 312 aa14.15□□□□□ -0.14
BRAT1-202ENST00000421712 MBD3L2Q8NHZ7 208 aaPredicted RBP14.15□□□□□ -0.14
BRAT1-202ENST00000421712 FNDC9Q8TBE3 224 aa14.15□□□□□ -0.14
BRAT1-202ENST00000421712 SLC25A43Q8WUT9 341 aaPredicted RBP14.15□□□□□ -0.14
BRAT1-202ENST00000421712 RASSF5Q8WWW0 418 aa14.15□□□□□ -0.14
BRAT1-202ENST00000421712 SLC35B4Q969S0 331 aa14.15□□□□□ -0.14
BRAT1-202ENST00000421712 TAMM41Q96BW9 452 aa14.15□□□□□ -0.14
BRAT1-202ENST00000421712 DNAJA3Q96EY1 480 aa14.15□□□□□ -0.14
BRAT1-202ENST00000421712 PSMG3-AS1Q96PY0 264 aa14.15□□□□□ -0.14
BRAT1-202ENST00000421712 UCN2Q96RP3 112 aa14.15□□□□□ -0.14
BRAT1-202ENST00000421712 KCTD14Q9BQ13 255 aaPredicted RBP14.15□□□□□ -0.14
BRAT1-202ENST00000421712 UCK2Q9BZX2 261 aa14.15□□□□□ -0.14
BRAT1-202ENST00000421712 ALG2Q9H553 416 aa14.15□□□□□ -0.14
BRAT1-202ENST00000421712 SPAG4Q9NPE6 437 aa14.15□□□□□ -0.14
BRAT1-202ENST00000421712 SELENONQ9NZV5 590 aa14.15□□□□□ -0.14
BRAT1-202ENST00000421712 GMPR2Q9P2T1 348 aaKnown RBP14.15□□□□□ -0.14
BRAT1-202ENST00000421712 OSGIN1Q9UJX0 560 aa14.15□□□□□ -0.14
BRAT1-202ENST00000421712 NCOA6Q14686 2063 aaPredicted RBP14.14□□□□□ -0.15
BRAT1-202ENST00000421712 FLNCQ14315 2725 aa14.14□□□□□ -0.15
BRAT1-202ENST00000421712 DVL2O14641 736 aa14.14□□□□□ -0.15
BRAT1-202ENST00000421712 CLDN1O95832 211 aa14.14□□□□□ -0.15
BRAT1-202ENST00000421712 PLGP00747 810 aaPredicted RBP14.14□□□□□ -0.15
BRAT1-202ENST00000421712 BMP5P22003 454 aa14.14□□□□□ -0.15
BRAT1-202ENST00000421712 CTSSP25774 331 aa14.14□□□□□ -0.15
BRAT1-202ENST00000421712 FKBP2P26885 142 aaKnown RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms