RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 POLE3Q9NRF9 147 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 DUSP22Q9NRW4 184 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 ZNF624Q9P2J8 865 aaPredicted RBP9.06□□□□□ -0.96
CD44-206ENST00000415148 MED31Q9Y3C7 131 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 AUP1Q9Y679 476 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 OGG1O15527 345 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 LATO43561 262 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 TPOP07202 933 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 MRPL3P09001 348 aaKnown RBP9.06□□□□□ -0.96
CD44-206ENST00000415148 SLC35G6P0C7Q6 338 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 ZNF888P0CJ79 500 aaPredicted RBP9.06□□□□□ -0.96
CD44-206ENST00000415148 ANXA3P12429 323 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 UGT2B7P16662 529 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 ZNF3P17036 446 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 M6PRP20645 277 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 HTR2AP28223 471 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 VSX2P58304 361 aaPredicted RBP9.06□□□□□ -0.96
CD44-206ENST00000415148 SRP54P61011 504 aaKnown RBP9.06□□□□□ -0.96
CD44-206ENST00000415148 ZNF85Q03923 595 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 ENPP2Q13822 863 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 EXOSC2Q13868 293 aaKnown RBP9.06□□□□□ -0.96
CD44-206ENST00000415148 FGL2Q14314 439 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 ZNF267Q14586 743 aaPredicted RBP9.06□□□□□ -0.96
CD44-206ENST00000415148 GPR68Q15743 365 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 MAPK14Q16539 360 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 KLHL12Q53G59 568 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 FHL5Q5TD97 284 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 WDR88Q6ZMY6 472 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 PRSS45Q7RTY3 260 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 DGLUCYQ7Z3D6 616 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 VN1R4Q7Z5H5 301 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 LUZP2Q86TE4 346 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 SIAH3Q8IW03 269 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 IZUMO1Q8IYV9 350 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 RFLNBQ8N5W9 214 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 CDRT4Q8N9R6 151 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 HAVCR2Q8TDQ0 301 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 THAP4Q8WY91 577 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 GCDHQ92947 438 aaPredicted RBP9.06□□□□□ -0.96
CD44-206ENST00000415148 COL26A1Q96A83 441 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 SORCS2Q96PQ0 1159 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 ZNF559Q9BR84 538 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 C1QTNF7Q9BXJ2 289 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 OR51J1Q9H342 316 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 ZDHHC4Q9NPG8 344 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 MRPL15Q9P015 296 aaKnown RBP9.06□□□□□ -0.96
CD44-206ENST00000415148 EMC3Q9P0I2 261 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 ZMIZ1Q9ULJ6 1067 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 CAMK2AQ9UQM7 478 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 RWDD3Q9Y3V2 267 aa9.06□□□□□ -0.96
CD44-206ENST00000415148 MDC1Q14676 2089 aaKnown RBP9.05□□□□□ -0.96
CD44-206ENST00000415148 TEX13CA0A0J9YWL9 993 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 A0A1B0GVI7 797 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 J3QLW9 94 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 ITGA10O75578 1167 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 GATBO75879 557 aaKnown RBP9.05□□□□□ -0.96
CD44-206ENST00000415148 ARL6IP5O75915 188 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 HPXP02790 462 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 MT-ND4P03905 459 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 CLUP10909 449 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 CPMP14384 443 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 ZNF19P17023 458 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 ZNF10P21506 573 aaPredicted RBP9.05□□□□□ -0.96
CD44-206ENST00000415148 DRD5P21918 477 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 VEGFBP49765 207 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 SELENOPP49908 381 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 SIM1P81133 766 aaPredicted RBP9.05□□□□□ -0.96
CD44-206ENST00000415148 SLC3A1Q07837 685 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 DYRK1AQ13627 763 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 COL28A1Q2UY09 1125 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 DCST2Q5T1A1 773 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 MRPL2Q5T653 305 aaKnown RBP9.05□□□□□ -0.96
CD44-206ENST00000415148 SLC22A10Q63ZE4 541 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 COMMD7Q86VX2 200 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 LSMEM1Q8N8F7 131 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 PFN4Q8NHR9 129 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 SMPDL3BQ92485 455 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 PHYHIPQ92561 330 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 HGDQ93099 445 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 MSANTD3Q96H12 275 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 RADILQ96JH8 1075 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 C4orf36Q96KX1 117 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 RBP7Q96R05 134 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 C20orf141Q9NUB4 165 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 FBXL4Q9UKA2 621 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 FLVCR2Q9UPI3 526 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 MRPS7Q9Y2R9 242 aaKnown RBP9.05□□□□□ -0.96
CD44-206ENST00000415148 PLEKHM1Q9Y4G2 1056 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 B8ZZF3 427 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 TNFSF14O43557 240 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 B3GALT2O43825 422 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 IFNGP01579 166 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 ATP1B1P05026 303 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 GUSBP08236 651 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 ADRB1P08588 477 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 PRG2P13727 222 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 IL9P15248 144 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 ACVR1BP36896 505 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 RBM34P42696 430 aaKnown RBP9.05□□□□□ -0.96
CD44-206ENST00000415148 RPS7P62081 194 aaKnown RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms