RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 GDF1P27539 372 aa12.18□□□□□ -0.46
RAPGEF1-204ENST00000414781 TMED10P49755 219 aaKnown RBP12.18□□□□□ -0.46
RAPGEF1-204ENST00000414781 SCARB2Q14108 478 aa12.18□□□□□ -0.46
RAPGEF1-204ENST00000414781 ADRM1Q16186 407 aa12.18□□□□□ -0.46
RAPGEF1-204ENST00000414781 GPAT3Q53EU6 434 aa12.18□□□□□ -0.46
RAPGEF1-204ENST00000414781 CT45A2Q5DJT8 189 aa12.18□□□□□ -0.46
RAPGEF1-204ENST00000414781 NHSL2Q5HYW2 709 aa12.18□□□□□ -0.46
RAPGEF1-204ENST00000414781 VASNQ6EMK4 673 aa12.18□□□□□ -0.46
RAPGEF1-204ENST00000414781 LRRC74BQ6ZQY2 392 aa12.18□□□□□ -0.46
RAPGEF1-204ENST00000414781 PATL1Q86TB9 770 aaKnown RBP12.18□□□□□ -0.46
RAPGEF1-204ENST00000414781 DND1Q8IYX4 353 aaKnown RBP12.18□□□□□ -0.46
RAPGEF1-204ENST00000414781 RNF148Q8N7C7 305 aa12.18□□□□□ -0.46
RAPGEF1-204ENST00000414781 PAQR8Q8TEZ7 354 aa12.18□□□□□ -0.46
RAPGEF1-204ENST00000414781 SLC38A5Q8WUX1 472 aa12.18□□□□□ -0.46
RAPGEF1-204ENST00000414781 OIT3Q8WWZ8 545 aa12.18□□□□□ -0.46
RAPGEF1-204ENST00000414781 CDS1Q92903 461 aa12.18□□□□□ -0.46
RAPGEF1-204ENST00000414781 ASB9Q96DX5 294 aa12.18□□□□□ -0.46
RAPGEF1-204ENST00000414781 ZMYND19Q96E35 227 aaPredicted RBP12.18□□□□□ -0.46
RAPGEF1-204ENST00000414781 LRGUKQ96M69 825 aa12.18□□□□□ -0.46
RAPGEF1-204ENST00000414781 HS3ST6Q96QI5 342 aa12.18□□□□□ -0.46
RAPGEF1-204ENST00000414781 ZNF607Q96SK3 696 aa12.18□□□□□ -0.46
RAPGEF1-204ENST00000414781 HOXD1Q9GZZ0 328 aa12.18□□□□□ -0.46
RAPGEF1-204ENST00000414781 SHARPINQ9H0F6 387 aa12.18□□□□□ -0.46
RAPGEF1-204ENST00000414781 SERHL2Q9H4I8 314 aa12.18□□□□□ -0.46
RAPGEF1-204ENST00000414781 MTHFD2LQ9H903 347 aaPredicted RBP12.18□□□□□ -0.46
RAPGEF1-204ENST00000414781 BCL2L10Q9HD36 194 aa12.18□□□□□ -0.46
RAPGEF1-204ENST00000414781 SH2D2AQ9NP31 389 aa12.18□□□□□ -0.46
RAPGEF1-204ENST00000414781 CNIH4Q9P003 139 aa12.18□□□□□ -0.46
RAPGEF1-204ENST00000414781 SNX13Q9Y5W8 968 aa12.18□□□□□ -0.46
RAPGEF1-204ENST00000414781 MSTNO14793 375 aa12.17□□□□□ -0.46
RAPGEF1-204ENST00000414781 ABCB7O75027 752 aa12.17□□□□□ -0.46
RAPGEF1-204ENST00000414781 PDE5AO76074 875 aa12.17□□□□□ -0.46
RAPGEF1-204ENST00000414781 RCBTB2O95199 551 aa12.17□□□□□ -0.46
RAPGEF1-204ENST00000414781 NUDT7P0C024 238 aa12.17□□□□□ -0.46
RAPGEF1-204ENST00000414781 CORO7P57737 925 aa12.17□□□□□ -0.46
RAPGEF1-204ENST00000414781 RPS4XP62701 263 aaKnown RBP12.17□□□□□ -0.46
RAPGEF1-204ENST00000414781 FOXF2Q12947 444 aa12.17□□□□□ -0.46
RAPGEF1-204ENST00000414781 FXNQ16595 210 aa12.17□□□□□ -0.46
RAPGEF1-204ENST00000414781 MTX3Q5HYI7 312 aa12.17□□□□□ -0.46
RAPGEF1-204ENST00000414781 DCST2Q5T1A1 773 aa12.17□□□□□ -0.46
RAPGEF1-204ENST00000414781 AP1ARQ63HQ0 302 aa12.17□□□□□ -0.46
RAPGEF1-204ENST00000414781 GLYATQ6IB77 296 aa12.17□□□□□ -0.46
RAPGEF1-204ENST00000414781 DHFR2Q86XF0 187 aa12.17□□□□□ -0.46
RAPGEF1-204ENST00000414781 PTOV1Q86YD1 416 aa12.17□□□□□ -0.46
RAPGEF1-204ENST00000414781 ZNF611Q8N823 705 aa12.17□□□□□ -0.46
RAPGEF1-204ENST00000414781 BBS10Q8TAM1 723 aa12.17□□□□□ -0.46
RAPGEF1-204ENST00000414781 FBXO30Q8TB52 745 aa12.17□□□□□ -0.46
RAPGEF1-204ENST00000414781 FAM110BQ8TC76 370 aa12.17□□□□□ -0.46
RAPGEF1-204ENST00000414781 ZPLD1Q8TCW7 415 aa12.17□□□□□ -0.46
RAPGEF1-204ENST00000414781 RASSF5Q8WWW0 418 aa12.17□□□□□ -0.46
RAPGEF1-204ENST00000414781 CLPTM1LQ96KA5 538 aa12.17□□□□□ -0.46
RAPGEF1-204ENST00000414781 KCNK17Q96T54 332 aa12.17□□□□□ -0.46
RAPGEF1-204ENST00000414781 SDF2Q99470 211 aa12.17□□□□□ -0.46
RAPGEF1-204ENST00000414781 NXF5Q9H1B4 397 aaKnown RBP12.17□□□□□ -0.46
RAPGEF1-204ENST00000414781 GORASP2Q9H8Y8 452 aa12.17□□□□□ -0.46
RAPGEF1-204ENST00000414781 HHATLQ9HCP6 504 aa12.17□□□□□ -0.46
RAPGEF1-204ENST00000414781 ACTR3BQ9P1U1 418 aa12.17□□□□□ -0.46
RAPGEF1-204ENST00000414781 SLC7A8Q9UHI5 535 aa12.17□□□□□ -0.46
RAPGEF1-204ENST00000414781 ZNF232Q9UNY5 417 aa12.17□□□□□ -0.46
RAPGEF1-204ENST00000414781 RAI1Q7Z5J4 1906 aaPredicted RBP12.17□□□□□ -0.46
RAPGEF1-204ENST00000414781 ROS1P08922 2347 aa12.16□□□□□ -0.46
RAPGEF1-204ENST00000414781 A0A0G2JK05 382 aa12.16□□□□□ -0.46
RAPGEF1-204ENST00000414781 CXCR6O00574 342 aa12.16□□□□□ -0.46
RAPGEF1-204ENST00000414781 KCNK2O95069 426 aa12.16□□□□□ -0.46
RAPGEF1-204ENST00000414781 PGM3O95394 542 aa12.16□□□□□ -0.46
RAPGEF1-204ENST00000414781 IL33O95760 270 aa12.16□□□□□ -0.46
RAPGEF1-204ENST00000414781 C1QCP02747 245 aa12.16□□□□□ -0.46
RAPGEF1-204ENST00000414781 BCHEP06276 602 aa12.16□□□□□ -0.46
RAPGEF1-204ENST00000414781 CYP4B1P13584 511 aa12.16□□□□□ -0.46
RAPGEF1-204ENST00000414781 ETS2P15036 469 aa12.16□□□□□ -0.46
RAPGEF1-204ENST00000414781 HOXB6P17509 224 aaKnown RBP12.16□□□□□ -0.46
RAPGEF1-204ENST00000414781 SRD5A1P18405 259 aa12.16□□□□□ -0.46
RAPGEF1-204ENST00000414781 GGT1P19440 569 aa12.16□□□□□ -0.46
RAPGEF1-204ENST00000414781 CFPP27918 469 aa12.16□□□□□ -0.46
RAPGEF1-204ENST00000414781 LOXP28300 417 aaPredicted RBP12.16□□□□□ -0.46
RAPGEF1-204ENST00000414781 IL12BP29460 328 aa12.16□□□□□ -0.46
RAPGEF1-204ENST00000414781 CD79BP40259 229 aa12.16□□□□□ -0.46
RAPGEF1-204ENST00000414781 PNLIPRP2P54317 469 aa12.16□□□□□ -0.46
RAPGEF1-204ENST00000414781 RPP38P78345 283 aaKnown RBP12.16□□□□□ -0.46
RAPGEF1-204ENST00000414781 EFR3AQ14156 821 aa12.16□□□□□ -0.46
RAPGEF1-204ENST00000414781 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.16□□□□□ -0.46
RAPGEF1-204ENST00000414781 ZSWIM7Q19AV6 140 aa12.16□□□□□ -0.46
RAPGEF1-204ENST00000414781 ZNF791Q3KP31 576 aaPredicted RBP12.16□□□□□ -0.46
RAPGEF1-204ENST00000414781 C1orf146Q5VVC0 180 aa12.16□□□□□ -0.46
RAPGEF1-204ENST00000414781 C12orf54Q6X4T0 127 aa12.16□□□□□ -0.46
RAPGEF1-204ENST00000414781 CCDC80Q76M96 950 aa12.16□□□□□ -0.46
RAPGEF1-204ENST00000414781 C10orf111Q8N326 155 aa12.16□□□□□ -0.46
RAPGEF1-204ENST00000414781 BHLHE22Q8NFJ8 381 aaPredicted RBP12.16□□□□□ -0.46
RAPGEF1-204ENST00000414781 OR52E4Q8NGH9 312 aa12.16□□□□□ -0.46
RAPGEF1-204ENST00000414781 SGMS2Q8NHU3 365 aa12.16□□□□□ -0.46
RAPGEF1-204ENST00000414781 NFKBIDQ8NI38 313 aa12.16□□□□□ -0.46
RAPGEF1-204ENST00000414781 SPPL2AQ8TCT8 520 aa12.16□□□□□ -0.46
RAPGEF1-204ENST00000414781 SLC26A7Q8TE54 656 aa12.16□□□□□ -0.46
RAPGEF1-204ENST00000414781 PIK3R3Q92569 461 aa12.16□□□□□ -0.46
RAPGEF1-204ENST00000414781 MAL2Q969L2 176 aa12.16□□□□□ -0.46
RAPGEF1-204ENST00000414781 CCDC124Q96CT7 223 aaKnown RBP12.16□□□□□ -0.46
RAPGEF1-204ENST00000414781 WDYHV1Q96HA8 205 aa12.16□□□□□ -0.46
RAPGEF1-204ENST00000414781 TMEM19Q96HH6 336 aa12.16□□□□□ -0.46
RAPGEF1-204ENST00000414781 ZNF597Q96LX8 424 aa12.16□□□□□ -0.46
RAPGEF1-204ENST00000414781 NSMCE2Q96MF7 247 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms