RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 CNOT11Q9UKZ1 510 aaKnown RBP4.44□□□□□ -1.7
VPS41-205ENST00000414632 BAG5Q9UL15 447 aa4.44□□□□□ -1.7
VPS41-205ENST00000414632 CFL2Q9Y281 166 aa4.44□□□□□ -1.7
VPS41-205ENST00000414632 OR10H1Q9Y4A9 318 aa4.44□□□□□ -1.7
VPS41-205ENST00000414632 CHST2Q9Y4C5 530 aa4.44□□□□□ -1.7
VPS41-205ENST00000414632 CHCHD2Q9Y6H1 151 aaPredicted RBP4.44□□□□□ -1.7
VPS41-205ENST00000414632 PHF3Q92576 2039 aaKnown RBP4.44□□□□□ -1.7
VPS41-205ENST00000414632 MED12Q93074 2177 aa4.44□□□□□ -1.7
VPS41-205ENST00000414632 CELSR2Q9HCU4 2923 aa4.44□□□□□ -1.7
VPS41-205ENST00000414632 USP9YO00507 2555 aaPredicted RBP4.44□□□□□ -1.7
VPS41-205ENST00000414632 NCOA6Q14686 2063 aaPredicted RBP4.43□□□□□ -1.7
VPS41-205ENST00000414632 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 NPIPA5A0A0B4J1W7 369 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 A0A1W2PPH5 198 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 A0A1W2PRB8 838 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 CLEC18AA5D8T8 446 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 FRG2CA6NGY1 282 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 ZAR1LA6NP61 321 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 AHRRA9YTQ3 701 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 NPIPA2E9PIF3 369 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 NPIPA7E9PJI5 369 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 NPIPA3F8WFD2 350 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 CCL21O00585 134 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 HDAC3O15379 428 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 EMC8O43402 210 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 PLOD3O60568 738 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 TSPAN2O60636 221 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 SLC19A2O60779 497 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 TBX19O60806 448 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 ZG16O60844 167 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 ICOSLGO75144 302 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 TRAPPC6AO75865 159 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 BCAS2O75934 225 aaPredicted RBP4.43□□□□□ -1.7
VPS41-205ENST00000414632 GLSO94925 669 aaPredicted RBP4.43□□□□□ -1.7
VPS41-205ENST00000414632 SCAF4O95104 1147 aaKnown RBP4.43□□□□□ -1.7
VPS41-205ENST00000414632 IGKV1D-16P01601 117 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 TPOP07202 933 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 NPIPA8P0DM63 369 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 ACP2P11117 423 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 CYP4B1P13584 511 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 LBPP18428 481 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 DRD5P21918 477 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 GABRA3P34903 492 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 KRT20P35900 424 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 PTGDSP41222 190 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 CASP3P42574 277 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 FRKP42685 505 aaPredicted RBP4.43□□□□□ -1.7
VPS41-205ENST00000414632 TMED10P49755 219 aaKnown RBP4.43□□□□□ -1.7
VPS41-205ENST00000414632 DGKQP52824 942 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 CLDN8P56748 225 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 PSG6Q00889 435 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 MAD2L1Q13257 205 aaPredicted RBP4.43□□□□□ -1.7
VPS41-205ENST00000414632 GAB1Q13480 694 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 LASP1Q14847 261 aaKnown RBP4.43□□□□□ -1.7
VPS41-205ENST00000414632 FAM174BQ3ZCQ3 159 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 SPANXN4Q5MJ08 99 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 CCNJQ5T5M9 372 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 C16orf54Q6UWD8 224 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 CLEC18BQ6UXF7 455 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 YRDCQ86U90 279 aaKnown RBP4.43□□□□□ -1.7
VPS41-205ENST00000414632 SLC22A16Q86VW1 577 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 KRTAP19-1Q8IUB9 90 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 CHERPQ8IWX8 916 aaKnown RBP4.43□□□□□ -1.7
VPS41-205ENST00000414632 RIMKLAQ8IXN7 391 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 SAMD14Q8IZD0 417 aaPredicted RBP4.43□□□□□ -1.7
VPS41-205ENST00000414632 GHDCQ8N2G8 530 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 OR2L13Q8N349 312 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 RPRMLQ8N4K4 120 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 ZFP62Q8NB50 900 aaPredicted RBP4.43□□□□□ -1.7
VPS41-205ENST00000414632 POGLUT1Q8NBL1 392 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 CLEC18CQ8NCF0 446 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 SLC16A11Q8NCK7 471 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 OR4A15Q8NGL6 344 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 OR9I1Q8NGQ6 314 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 RAB3IL1Q8TBN0 382 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 SPPL2AQ8TCT8 520 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 CDS1Q92903 461 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 HGDQ93099 445 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 MTERF3Q96E29 417 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 FAM120BQ96EK7 910 aaKnown RBP4.43□□□□□ -1.7
VPS41-205ENST00000414632 GIMAP5Q96F15 307 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 ZBED6CLQ96FA7 236 aaPredicted RBP4.43□□□□□ -1.7
VPS41-205ENST00000414632 RMND5BQ96G75 393 aaPredicted RBP4.43□□□□□ -1.7
VPS41-205ENST00000414632 TEX37Q96LM6 180 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 ZNF597Q96LX8 424 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 COL21A1Q96P44 957 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 BTBD9Q96Q07 612 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 EBF4Q9BQW3 602 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 CHCHD6Q9BRQ6 235 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 OSBPL11Q9BXB4 747 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 ACTRT3Q9BYD9 372 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 EXO5Q9H790 373 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 ZNF703Q9H7S9 590 aaPredicted RBP4.43□□□□□ -1.7
VPS41-205ENST00000414632 IL1RL2Q9HB29 575 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 ZCCHC3Q9NUD5 404 aaKnown RBP4.43□□□□□ -1.7
VPS41-205ENST00000414632 INTS9Q9NV88 658 aaKnown RBP4.43□□□□□ -1.7
VPS41-205ENST00000414632 AIG1Q9NVV5 245 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 GIN1Q9NXP7 522 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 ALKBH4Q9NXW9 302 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 TAS2R9Q9NYW1 312 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms