RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 PHIPQ8WWQ0 1821 aa2.65□□□□□ -1.98
HMGB1P11-201ENST00000413899 A0A0G2JMZ2 1700 aa2.65□□□□□ -1.98
HMGB1P11-201ENST00000413899 LRRC37A2A6NM11 1700 aa2.65□□□□□ -1.98
HMGB1P11-201ENST00000413899 A0A0U1RQV5 110 aa2.65□□□□□ -1.99
HMGB1P11-201ENST00000413899 A0A1B0GUL7 405 aa2.65□□□□□ -1.99
HMGB1P11-201ENST00000413899 SAGE2PA6NJ88 616 aa2.65□□□□□ -1.99
HMGB1P11-201ENST00000413899 B4DXG7 233 aa2.65□□□□□ -1.99
HMGB1P11-201ENST00000413899 F8WDY8 70 aa2.65□□□□□ -1.99
HMGB1P11-201ENST00000413899 CASKO14936 926 aa2.65□□□□□ -1.99
HMGB1P11-201ENST00000413899 SCRG1O75711 98 aa2.65□□□□□ -1.99
HMGB1P11-201ENST00000413899 PTBP3O95758 552 aaKnown RBP2.65□□□□□ -1.99
HMGB1P11-201ENST00000413899 PGK1P00558 417 aa2.65□□□□□ -1.99
HMGB1P11-201ENST00000413899 THRBP10828 461 aa2.65□□□□□ -1.99
HMGB1P11-201ENST00000413899 PDHBP11177 359 aa2.65□□□□□ -1.99
HMGB1P11-201ENST00000413899 PSMB1P20618 241 aaKnown RBP2.65□□□□□ -1.99
HMGB1P11-201ENST00000413899 UGT1A3P35503 534 aa2.65□□□□□ -1.99
HMGB1P11-201ENST00000413899 EFNA3P52797 238 aa2.65□□□□□ -1.99
HMGB1P11-201ENST00000413899 GMFBP60983 142 aa2.65□□□□□ -1.99
HMGB1P11-201ENST00000413899 RPL8P62917 257 aaKnown RBP2.65□□□□□ -1.99
HMGB1P11-201ENST00000413899 VLDLRP98155 873 aa2.65□□□□□ -1.99
HMGB1P11-201ENST00000413899 HSF2Q03933 536 aa2.65□□□□□ -1.99
HMGB1P11-201ENST00000413899 HSP90AB3PQ58FF7 597 aa2.65□□□□□ -1.99
HMGB1P11-201ENST00000413899 OR2B11Q5JQS5 317 aa2.65□□□□□ -1.99
HMGB1P11-201ENST00000413899 OR5M10Q6IEU7 315 aa2.65□□□□□ -1.99
HMGB1P11-201ENST00000413899 ZCCHC12Q6PEW1 402 aa2.65□□□□□ -1.99
HMGB1P11-201ENST00000413899 CYS1Q717R9 158 aa2.65□□□□□ -1.99
HMGB1P11-201ENST00000413899 LRRC70Q7Z2Q7 622 aa2.65□□□□□ -1.99
HMGB1P11-201ENST00000413899 ANKRD37Q7Z713 158 aa2.65□□□□□ -1.99
HMGB1P11-201ENST00000413899 LHFPL4Q7Z7J7 247 aa2.65□□□□□ -1.99
HMGB1P11-201ENST00000413899 Q8N7P7 452 aa2.65□□□□□ -1.99
HMGB1P11-201ENST00000413899 ZSCAN4Q8NAM6 433 aaPredicted RBP2.65□□□□□ -1.99
HMGB1P11-201ENST00000413899 SLC25A38Q96DW6 304 aa2.65□□□□□ -1.99
HMGB1P11-201ENST00000413899 TCEANC2Q96MN5 208 aa2.65□□□□□ -1.99
HMGB1P11-201ENST00000413899 ZIM3Q96PE6 472 aa2.65□□□□□ -1.99
HMGB1P11-201ENST00000413899 TBCDQ9BTW9 1192 aa2.65□□□□□ -1.99
HMGB1P11-201ENST00000413899 NFKBIZQ9BYH8 718 aa2.65□□□□□ -1.99
HMGB1P11-201ENST00000413899 KRT23Q9C075 422 aa2.65□□□□□ -1.99
HMGB1P11-201ENST00000413899 POLR3FQ9H1D9 316 aaPredicted RBP2.65□□□□□ -1.99
HMGB1P11-201ENST00000413899 Q9H3A6 140 aa2.65□□□□□ -1.99
HMGB1P11-201ENST00000413899 BOLA2Q9H3K6 86 aa2.65□□□□□ -1.99
HMGB1P11-201ENST00000413899 EHD1Q9H4M9 534 aa2.65□□□□□ -1.99
HMGB1P11-201ENST00000413899 ABCB10Q9NRK6 738 aa2.65□□□□□ -1.99
HMGB1P11-201ENST00000413899 AGPAT5Q9NUQ2 364 aa2.65□□□□□ -1.99
HMGB1P11-201ENST00000413899 ADAM22Q9P0K1 906 aa2.65□□□□□ -1.99
HMGB1P11-201ENST00000413899 NYAP2Q9P242 653 aa2.65□□□□□ -1.99
HMGB1P11-201ENST00000413899 SPRR3Q9UBC9 169 aa2.65□□□□□ -1.99
HMGB1P11-201ENST00000413899 CRLS1Q9UJA2 301 aa2.65□□□□□ -1.99
HMGB1P11-201ENST00000413899 ODF2LQ9ULJ1 636 aa2.65□□□□□ -1.99
HMGB1P11-201ENST00000413899 LCTP09848 1927 aa2.65□□□□□ -1.99
HMGB1P11-201ENST00000413899 DICER1Q9UPY3 1922 aaKnown RBP2.65□□□□□ -1.99
HMGB1P11-201ENST00000413899 PTPRFP10586 1907 aa2.64□□□□□ -1.99
HMGB1P11-201ENST00000413899 VPS26AO75436 327 aa2.64□□□□□ -1.99
HMGB1P11-201ENST00000413899 CTDNEP1O95476 244 aa2.64□□□□□ -1.99
HMGB1P11-201ENST00000413899 SEMG1P04279 462 aa2.64□□□□□ -1.99
HMGB1P11-201ENST00000413899 CA3P07451 260 aa2.64□□□□□ -1.99
HMGB1P11-201ENST00000413899 GCFC2P16383 781 aaKnown RBP2.64□□□□□ -1.99
HMGB1P11-201ENST00000413899 ADRA1AP35348 466 aa2.64□□□□□ -1.99
HMGB1P11-201ENST00000413899 CYLC1P35663 651 aaPredicted RBP2.64□□□□□ -1.99
HMGB1P11-201ENST00000413899 STARP49675 285 aa2.64□□□□□ -1.99
HMGB1P11-201ENST00000413899 KRTAP12-2P59991 146 aa2.64□□□□□ -1.99
HMGB1P11-201ENST00000413899 OSTNP61366 133 aa2.64□□□□□ -1.99
HMGB1P11-201ENST00000413899 TIMM10P62072 90 aa2.64□□□□□ -1.99
HMGB1P11-201ENST00000413899 OTUD4Q01804 1114 aaKnown RBP2.64□□□□□ -1.99
HMGB1P11-201ENST00000413899 PDZK1IP1Q13113 114 aa2.64□□□□□ -1.99
HMGB1P11-201ENST00000413899 RFTN1Q14699 578 aaPredicted RBP2.64□□□□□ -1.99
HMGB1P11-201ENST00000413899 INAQ16352 499 aa2.64□□□□□ -1.99
HMGB1P11-201ENST00000413899 C12orf60Q5U649 245 aa2.64□□□□□ -1.99
HMGB1P11-201ENST00000413899 ZNF544Q6NX49 715 aa2.64□□□□□ -1.99
HMGB1P11-201ENST00000413899 NIPAL3Q6P499 406 aa2.64□□□□□ -1.99
HMGB1P11-201ENST00000413899 LRRC8BQ6P9F7 803 aa2.64□□□□□ -1.99
HMGB1P11-201ENST00000413899 CXCL17Q6UXB2 119 aa2.64□□□□□ -1.99
HMGB1P11-201ENST00000413899 UNC5DQ6UXZ4 953 aa2.64□□□□□ -1.99
HMGB1P11-201ENST00000413899 MISPQ8IVT2 679 aa2.64□□□□□ -1.99
HMGB1P11-201ENST00000413899 IL1F10Q8WWZ1 152 aa2.64□□□□□ -1.99
HMGB1P11-201ENST00000413899 NUS1Q96E22 293 aa2.64□□□□□ -1.99
HMGB1P11-201ENST00000413899 PDFQ9HBH1 243 aa2.64□□□□□ -1.99
HMGB1P11-201ENST00000413899 ABCG2Q9UNQ0 655 aa2.64□□□□□ -1.99
HMGB1P11-201ENST00000413899 C10orf71Q711Q0 1435 aa2.64□□□□□ -1.99
HMGB1P11-201ENST00000413899 DOCK1Q14185 1865 aa2.64□□□□□ -1.99
HMGB1P11-201ENST00000413899 RLFQ13129 1914 aa2.64□□□□□ -1.99
HMGB1P11-201ENST00000413899 ROBO3Q96MS0 1386 aa2.63□□□□□ -1.99
HMGB1P11-201ENST00000413899 SBF1O95248 1867 aa2.63□□□□□ -1.99
HMGB1P11-201ENST00000413899 DHRS7CA6NNS2 312 aa2.63□□□□□ -1.99
HMGB1P11-201ENST00000413899 CHADO15335 359 aa2.63□□□□□ -1.99
HMGB1P11-201ENST00000413899 JAK2O60674 1132 aa2.63□□□□□ -1.99
HMGB1P11-201ENST00000413899 TOM1O60784 492 aa2.63□□□□□ -1.99
HMGB1P11-201ENST00000413899 STX11O75558 287 aa2.63□□□□□ -1.99
HMGB1P11-201ENST00000413899 LYPLA1O75608 230 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P11-201ENST00000413899 OPN1LWP04000 364 aa2.63□□□□□ -1.99
HMGB1P11-201ENST00000413899 ANXA3P12429 323 aa2.63□□□□□ -1.99
HMGB1P11-201ENST00000413899 ELK1P19419 428 aa2.63□□□□□ -1.99
HMGB1P11-201ENST00000413899 PTGFRP43088 359 aa2.63□□□□□ -1.99
HMGB1P11-201ENST00000413899 GNPDA1P46926 289 aa2.63□□□□□ -1.99
HMGB1P11-201ENST00000413899 SLC26A2P50443 739 aa2.63□□□□□ -1.99
HMGB1P11-201ENST00000413899 NOVA1P51513 510 aaKnown RBP2.63□□□□□ -1.99
HMGB1P11-201ENST00000413899 DIO3P55073 304 aa2.63□□□□□ -1.99
HMGB1P11-201ENST00000413899 LIM2P55344 173 aa2.63□□□□□ -1.99
HMGB1P11-201ENST00000413899 MRPS11P82912 194 aaKnown RBP2.63□□□□□ -1.99
HMGB1P11-201ENST00000413899 BDH1Q02338 343 aa2.63□□□□□ -1.99
HMGB1P11-201ENST00000413899 TMEM52BQ4KMG9 183 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms