RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 OTUD1Q5VV17 481 aaPredicted RBP16.09■□□□□ 0.17
PHRF1-202ENST00000413872 FAM71E1Q6IPT2 247 aa16.09■□□□□ 0.17
PHRF1-202ENST00000413872 OR51T1Q8NGJ9 327 aa16.09■□□□□ 0.17
PHRF1-202ENST00000413872 RSC1A1Q92681 617 aa16.09■□□□□ 0.17
PHRF1-202ENST00000413872 GLIPR2Q9H4G4 154 aa16.09■□□□□ 0.17
PHRF1-202ENST00000413872 ANKRD19PQ9H560 264 aa16.09■□□□□ 0.17
PHRF1-202ENST00000413872 MRPS2Q9Y399 296 aaKnown RBP16.09■□□□□ 0.17
PHRF1-202ENST00000413872 TRAV36DV7A0A075B6V5 113 aa16.09■□□□□ 0.17
PHRF1-202ENST00000413872 A0A1W2PPC4 97 aa16.09■□□□□ 0.17
PHRF1-202ENST00000413872 GFYI3L273 518 aa16.09■□□□□ 0.17
PHRF1-202ENST00000413872 DPP4P27487 766 aa16.09■□□□□ 0.17
PHRF1-202ENST00000413872 TACR3P29371 465 aa16.09■□□□□ 0.17
PHRF1-202ENST00000413872 RAB12Q6IQ22 244 aa16.09■□□□□ 0.17
PHRF1-202ENST00000413872 IGFN1Q86VF2 1251 aa16.09■□□□□ 0.17
PHRF1-202ENST00000413872 LRRC56Q8IYG6 542 aaPredicted RBP16.09■□□□□ 0.17
PHRF1-202ENST00000413872 PIAS4Q8N2W9 510 aaPredicted RBP16.09■□□□□ 0.17
PHRF1-202ENST00000413872 CPT1CQ8TCG5 803 aa16.09■□□□□ 0.17
PHRF1-202ENST00000413872 SLC41A2Q96JW4 573 aa16.09■□□□□ 0.17
PHRF1-202ENST00000413872 DDX31Q9H8H2 851 aaKnown RBP16.09■□□□□ 0.17
PHRF1-202ENST00000413872 DDAH2O95865 285 aa16.09■□□□□ 0.17
PHRF1-202ENST00000413872 LTB4RQ15722 352 aa16.09■□□□□ 0.17
PHRF1-202ENST00000413872 NKAIN1Q4KMZ8 207 aa16.09■□□□□ 0.17
PHRF1-202ENST00000413872 C1orf53Q5VUE5 145 aa16.09■□□□□ 0.17
PHRF1-202ENST00000413872 MRPL41Q8IXM3 137 aaKnown RBP16.09■□□□□ 0.17
PHRF1-202ENST00000413872 LMNTD1Q8N9Z9 388 aa16.09■□□□□ 0.17
PHRF1-202ENST00000413872 RAB39BQ96DA2 213 aa16.09■□□□□ 0.17
PHRF1-202ENST00000413872 STACQ99469 402 aa16.09■□□□□ 0.17
PHRF1-202ENST00000413872 RDH8Q9NYR8 311 aa16.09■□□□□ 0.17
PHRF1-202ENST00000413872 TBC1D29Q9UFV1 150 aa16.09■□□□□ 0.17
PHRF1-202ENST00000413872 TRAV18A0A075B6X5 111 aa16.09■□□□□ 0.17
PHRF1-202ENST00000413872 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.09■□□□□ 0.17
PHRF1-202ENST00000413872 ITGB2P05107 769 aa16.09■□□□□ 0.17
PHRF1-202ENST00000413872 SLC26A5P58743 744 aa16.09■□□□□ 0.17
PHRF1-202ENST00000413872 OR5M10Q6IEU7 315 aa16.09■□□□□ 0.17
PHRF1-202ENST00000413872 AAED1Q7RTV5 226 aa16.09■□□□□ 0.17
PHRF1-202ENST00000413872 OR1J2Q8NGS2 313 aa16.09■□□□□ 0.17
PHRF1-202ENST00000413872 TRMT10AQ8TBZ6 339 aaKnown RBP16.09■□□□□ 0.17
PHRF1-202ENST00000413872 ZFAND2BQ8WV99 257 aa16.09■□□□□ 0.17
PHRF1-202ENST00000413872 SLC29A1Q99808 456 aa16.09■□□□□ 0.17
PHRF1-202ENST00000413872 VRK1Q99986 396 aaPredicted RBP16.09■□□□□ 0.17
PHRF1-202ENST00000413872 BEX2Q9BXY8 128 aa16.09■□□□□ 0.17
PHRF1-202ENST00000413872 TMEM38AQ9H6F2 299 aa16.09■□□□□ 0.17
PHRF1-202ENST00000413872 BEX1Q9HBH7 125 aa16.09■□□□□ 0.17
PHRF1-202ENST00000413872 DOCK2Q92608 1830 aa16.08■□□□□ 0.17
PHRF1-202ENST00000413872 CRTAPO75718 401 aaPredicted RBP16.08■□□□□ 0.17
PHRF1-202ENST00000413872 SERPINA5P05154 406 aa16.08■□□□□ 0.17
PHRF1-202ENST00000413872 B3GNT7Q8NFL0 401 aa16.08■□□□□ 0.17
PHRF1-202ENST00000413872 OR2T11Q8NH01 316 aa16.08■□□□□ 0.17
PHRF1-202ENST00000413872 TFAP2CQ92754 450 aa16.08■□□□□ 0.17
PHRF1-202ENST00000413872 CCDC74AQ96AQ1 378 aa16.08■□□□□ 0.17
PHRF1-202ENST00000413872 GPRIN2O60269 458 aa16.08■□□□□ 0.16
PHRF1-202ENST00000413872 CDK1P06493 297 aa16.08■□□□□ 0.16
PHRF1-202ENST00000413872 GPR50Q13585 617 aa16.08■□□□□ 0.16
PHRF1-202ENST00000413872 MED25Q71SY5 747 aa16.08■□□□□ 0.16
PHRF1-202ENST00000413872 MAFAQ8NHW3 353 aaPredicted RBP16.08■□□□□ 0.16
PHRF1-202ENST00000413872 ZNF566Q969W8 418 aa16.08■□□□□ 0.16
PHRF1-202ENST00000413872 MPIG6BO95866 241 aa16.08■□□□□ 0.16
PHRF1-202ENST00000413872 AGTR1P30556 359 aa16.08■□□□□ 0.16
PHRF1-202ENST00000413872 MFSD12Q6NUT3 480 aa16.08■□□□□ 0.16
PHRF1-202ENST00000413872 LILRA3Q8N6C8 439 aaPredicted RBP16.08■□□□□ 0.16
PHRF1-202ENST00000413872 C16orf58Q96GQ5 468 aa16.08■□□□□ 0.16
PHRF1-202ENST00000413872 CACNG6Q9BXT2 260 aa16.08■□□□□ 0.16
PHRF1-202ENST00000413872 CXorf36Q9H7Y0 433 aa16.08■□□□□ 0.16
PHRF1-202ENST00000413872 FOXD2O60548 495 aaPredicted RBP16.08■□□□□ 0.16
PHRF1-202ENST00000413872 ACP2P11117 423 aa16.08■□□□□ 0.16
PHRF1-202ENST00000413872 ATP1B3P54709 279 aa16.08■□□□□ 0.16
PHRF1-202ENST00000413872 C6orf15Q6UXA7 325 aaPredicted RBP16.08■□□□□ 0.16
PHRF1-202ENST00000413872 TMEM64Q6YI46 380 aa16.08■□□□□ 0.16
PHRF1-202ENST00000413872 MKXQ8IYA7 352 aa16.08■□□□□ 0.16
PHRF1-202ENST00000413872 CENPSQ8N2Z9 138 aa16.08■□□□□ 0.16
PHRF1-202ENST00000413872 ZADH2Q8N4Q0 377 aa16.08■□□□□ 0.16
PHRF1-202ENST00000413872 CD1CP29017 333 aa16.07■□□□□ 0.16
PHRF1-202ENST00000413872 FAM76BQ5HYJ3 339 aa16.07■□□□□ 0.16
PHRF1-202ENST00000413872 MBOAT2Q6ZWT7 520 aa16.07■□□□□ 0.16
PHRF1-202ENST00000413872 SLC16A14Q7RTX9 510 aa16.07■□□□□ 0.16
PHRF1-202ENST00000413872 KMT5CQ86Y97 462 aa16.07■□□□□ 0.16
PHRF1-202ENST00000413872 GALNT11Q8NCW6 608 aa16.07■□□□□ 0.16
PHRF1-202ENST00000413872 CSNK2A3Q8NEV1 391 aa16.07■□□□□ 0.16
PHRF1-202ENST00000413872 ELP4Q96EB1 424 aa16.07■□□□□ 0.16
PHRF1-202ENST00000413872 LMF1Q96S06 567 aa16.07■□□□□ 0.16
PHRF1-202ENST00000413872 RANBP3Q9H6Z4 567 aaPredicted RBP16.07■□□□□ 0.16
PHRF1-202ENST00000413872 TMEM165Q9HC07 324 aa16.07■□□□□ 0.16
PHRF1-202ENST00000413872 FBXL3Q9UKT7 428 aa16.07■□□□□ 0.16
PHRF1-202ENST00000413872 TVP23AA6NH52 213 aa16.07■□□□□ 0.16
PHRF1-202ENST00000413872 WDPCPO95876 746 aa16.07■□□□□ 0.16
PHRF1-202ENST00000413872 CDK2P24941 298 aa16.07■□□□□ 0.16
PHRF1-202ENST00000413872 CYB561P49447 251 aa16.07■□□□□ 0.16
PHRF1-202ENST00000413872 C3orf38Q5JPI3 329 aa16.07■□□□□ 0.16
PHRF1-202ENST00000413872 HES5Q5TA89 166 aa16.07■□□□□ 0.16
PHRF1-202ENST00000413872 BORAQ6PGQ7 559 aa16.07■□□□□ 0.16
PHRF1-202ENST00000413872 SLC35F3Q8IY50 421 aa16.07■□□□□ 0.16
PHRF1-202ENST00000413872 CMTM1Q8IZ96 169 aa16.07■□□□□ 0.16
PHRF1-202ENST00000413872 ATG4BQ9Y4P1 393 aa16.07■□□□□ 0.16
PHRF1-202ENST00000413872 NAP1L6A6NFF2 107 aa16.07■□□□□ 0.16
PHRF1-202ENST00000413872 AMY2AP04746 511 aa16.07■□□□□ 0.16
PHRF1-202ENST00000413872 AKR1C2P52895 323 aa16.07■□□□□ 0.16
PHRF1-202ENST00000413872 IFI44Q8TCB0 444 aa16.07■□□□□ 0.16
PHRF1-202ENST00000413872 MVB12AQ96EY5 273 aa16.07■□□□□ 0.16
PHRF1-202ENST00000413872 VN1R3Q9BXE9 311 aa16.07■□□□□ 0.16
PHRF1-202ENST00000413872 LHPPQ9H008 270 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms