RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 FGF4P08620 206 aa10.67□□□□□ -0.7
LIMS2-210ENST00000413578 KRT16P08779 473 aa10.67□□□□□ -0.7
LIMS2-210ENST00000413578 CSF3P09919 207 aa10.67□□□□□ -0.7
LIMS2-210ENST00000413578 CPA3P15088 417 aa10.67□□□□□ -0.7
LIMS2-210ENST00000413578 USF1P22415 310 aaPredicted RBP10.67□□□□□ -0.7
LIMS2-210ENST00000413578 HPCAL1P37235 193 aa10.67□□□□□ -0.7
LIMS2-210ENST00000413578 FABP6P51161 128 aa10.67□□□□□ -0.7
LIMS2-210ENST00000413578 CSNK2A1P68400 391 aaPredicted RBP10.67□□□□□ -0.7
LIMS2-210ENST00000413578 SLC25A3Q00325 362 aa10.67□□□□□ -0.7
LIMS2-210ENST00000413578 TP53BP2Q13625 1128 aa10.67□□□□□ -0.7
LIMS2-210ENST00000413578 MST1LQ2TV78 715 aa10.67□□□□□ -0.7
LIMS2-210ENST00000413578 GALNTL6Q49A17 601 aa10.67□□□□□ -0.7
LIMS2-210ENST00000413578 XKR7Q5GH72 579 aa10.67□□□□□ -0.7
LIMS2-210ENST00000413578 AP1ARQ63HQ0 302 aa10.67□□□□□ -0.7
LIMS2-210ENST00000413578 KLHL17Q6TDP4 642 aa10.67□□□□□ -0.7
LIMS2-210ENST00000413578 ZNF614Q8N883 585 aa10.67□□□□□ -0.7
LIMS2-210ENST00000413578 WDR31Q8NA23 367 aa10.67□□□□□ -0.7
LIMS2-210ENST00000413578 FAM71CQ8NEG0 241 aa10.67□□□□□ -0.7
LIMS2-210ENST00000413578 RFWD2Q8NHY2 731 aa10.67□□□□□ -0.7
LIMS2-210ENST00000413578 SFXN5Q8TD22 340 aa10.67□□□□□ -0.7
LIMS2-210ENST00000413578 APH1AQ96BI3 265 aa10.67□□□□□ -0.7
LIMS2-210ENST00000413578 COQ8BQ96D53 544 aa10.67□□□□□ -0.7
LIMS2-210ENST00000413578 CHMP6Q96FZ7 201 aa10.67□□□□□ -0.7
LIMS2-210ENST00000413578 TRMOQ9BU70 441 aa10.67□□□□□ -0.7
LIMS2-210ENST00000413578 THUMPD3Q9BV44 507 aaKnown RBP10.67□□□□□ -0.7
LIMS2-210ENST00000413578 CCDC106Q9BWC9 280 aa10.67□□□□□ -0.7
LIMS2-210ENST00000413578 GATA5Q9BWX5 397 aaPredicted RBP10.67□□□□□ -0.7
LIMS2-210ENST00000413578 ACER3Q9NUN7 267 aa10.67□□□□□ -0.7
LIMS2-210ENST00000413578 ASB6Q9NWX5 421 aa10.67□□□□□ -0.7
LIMS2-210ENST00000413578 TAS2R16Q9NYV7 291 aa10.67□□□□□ -0.7
LIMS2-210ENST00000413578 EMC3Q9P0I2 261 aa10.67□□□□□ -0.7
LIMS2-210ENST00000413578 FAF1Q9UNN5 650 aaPredicted RBP10.67□□□□□ -0.7
LIMS2-210ENST00000413578 TMEM233B4DJY2 109 aa10.66□□□□□ -0.7
LIMS2-210ENST00000413578 SULT2B1O00204 365 aa10.66□□□□□ -0.7
LIMS2-210ENST00000413578 DNPH1O43598 174 aa10.66□□□□□ -0.7
LIMS2-210ENST00000413578 UGT2B17O75795 530 aa10.66□□□□□ -0.7
LIMS2-210ENST00000413578 LY6HO94772 140 aa10.66□□□□□ -0.7
LIMS2-210ENST00000413578 C6orf47O95873 294 aa10.66□□□□□ -0.7
LIMS2-210ENST00000413578 FAM153BP0C7A2 387 aa10.66□□□□□ -0.7
LIMS2-210ENST00000413578 DDX5P17844 614 aaKnown RBP10.66□□□□□ -0.7
LIMS2-210ENST00000413578 RPL3P39023 403 aaKnown RBP10.66□□□□□ -0.7
LIMS2-210ENST00000413578 CCR4P51679 360 aa10.66□□□□□ -0.7
LIMS2-210ENST00000413578 LSM11P83369 360 aaKnown RBP eCLIP10.66□□□□□ -0.7
LIMS2-210ENST00000413578 SRSF2Q01130 221 aaKnown RBP10.66□□□□□ -0.7
LIMS2-210ENST00000413578 PLAURQ03405 335 aa10.66□□□□□ -0.7
LIMS2-210ENST00000413578 CHRNEQ04844 493 aa10.66□□□□□ -0.7
LIMS2-210ENST00000413578 PTGR1Q14914 329 aa10.66□□□□□ -0.7
LIMS2-210ENST00000413578 PCLAFQ15004 111 aa10.66□□□□□ -0.7
LIMS2-210ENST00000413578 SWI5Q1ZZU3 235 aa10.66□□□□□ -0.7
LIMS2-210ENST00000413578 FAM153CQ494X1 144 aa10.66□□□□□ -0.7
LIMS2-210ENST00000413578 RIMKLAQ8IXN7 391 aa10.66□□□□□ -0.7
LIMS2-210ENST00000413578 TMCO5AQ8N6Q1 288 aa10.66□□□□□ -0.7
LIMS2-210ENST00000413578 OR5D16Q8NGK9 328 aa10.66□□□□□ -0.7
LIMS2-210ENST00000413578 SLC25A43Q8WUT9 341 aaPredicted RBP10.66□□□□□ -0.7
LIMS2-210ENST00000413578 TWIST2Q8WVJ9 160 aa10.66□□□□□ -0.7
LIMS2-210ENST00000413578 ARL8AQ96BM9 186 aa10.66□□□□□ -0.7
LIMS2-210ENST00000413578 MOAP1Q96BY2 351 aa10.66□□□□□ -0.7
LIMS2-210ENST00000413578 ARL5BQ96KC2 179 aa10.66□□□□□ -0.7
LIMS2-210ENST00000413578 OR7D2Q96RA2 312 aa10.66□□□□□ -0.7
LIMS2-210ENST00000413578 PRR14Q9BWN1 585 aa10.66□□□□□ -0.7
LIMS2-210ENST00000413578 ZNF350Q9GZX5 532 aa10.66□□□□□ -0.7
LIMS2-210ENST00000413578 GIMAP2Q9UG22 337 aa10.66□□□□□ -0.7
LIMS2-210ENST00000413578 POU2F3Q9UKI9 436 aa10.66□□□□□ -0.7
LIMS2-210ENST00000413578 NOSIPQ9Y314 301 aaKnown RBP10.66□□□□□ -0.7
LIMS2-210ENST00000413578 FIS1Q9Y3D6 152 aa10.66□□□□□ -0.7
LIMS2-210ENST00000413578 YLPM1P49750 1951 aaKnown RBP10.66□□□□□ -0.7
LIMS2-210ENST00000413578 MALRD1Q5VYJ5 2156 aa10.65□□□□□ -0.7
LIMS2-210ENST00000413578 CIB4A0PJX0 185 aa10.65□□□□□ -0.7
LIMS2-210ENST00000413578 CCT8L1PA6NM43 557 aa10.65□□□□□ -0.7
LIMS2-210ENST00000413578 TMEM114B3SHH9 223 aa10.65□□□□□ -0.7
LIMS2-210ENST00000413578 M0R1B8 84 aa10.65□□□□□ -0.7
LIMS2-210ENST00000413578 GPR171O14626 319 aa10.65□□□□□ -0.7
LIMS2-210ENST00000413578 PIP5K1BO14986 540 aa10.65□□□□□ -0.7
LIMS2-210ENST00000413578 FCMRO60667 390 aa10.65□□□□□ -0.7
LIMS2-210ENST00000413578 BCAS1O75363 584 aaPredicted RBP10.65□□□□□ -0.7
LIMS2-210ENST00000413578 PMS2P2O95744 297 aa10.65□□□□□ -0.7
LIMS2-210ENST00000413578 CHRNGP07510 517 aa10.65□□□□□ -0.7
LIMS2-210ENST00000413578 SRD5A1P18405 259 aa10.65□□□□□ -0.7
LIMS2-210ENST00000413578 APOBEC3AP31941 199 aaPredicted RBP10.65□□□□□ -0.7
LIMS2-210ENST00000413578 CCT5P48643 541 aa10.65□□□□□ -0.7
LIMS2-210ENST00000413578 GZMKP49863 264 aa10.65□□□□□ -0.7
LIMS2-210ENST00000413578 RPS26P62854 115 aaKnown RBP10.65□□□□□ -0.7
LIMS2-210ENST00000413578 HBA1P69905 142 aa10.65□□□□□ -0.7
LIMS2-210ENST00000413578 H3F3AP84243 136 aa10.65□□□□□ -0.7
LIMS2-210ENST00000413578 MERTKQ12866 999 aa10.65□□□□□ -0.7
LIMS2-210ENST00000413578 FAM120AOSQ5T036 256 aa10.65□□□□□ -0.7
LIMS2-210ENST00000413578 OR7E24Q6IFN5 339 aa10.65□□□□□ -0.7
LIMS2-210ENST00000413578 OLIG3Q7RTU3 272 aa10.65□□□□□ -0.7
LIMS2-210ENST00000413578 C10orf107Q8IVU9 208 aa10.65□□□□□ -0.7
LIMS2-210ENST00000413578 C17orf78Q8N4C9 275 aa10.65□□□□□ -0.7
LIMS2-210ENST00000413578 KRTCAP2Q8N6L1 136 aa10.65□□□□□ -0.7
LIMS2-210ENST00000413578 NATD1Q8N6N6 113 aa10.65□□□□□ -0.7
LIMS2-210ENST00000413578 OR52E4Q8NGH9 312 aa10.65□□□□□ -0.7
LIMS2-210ENST00000413578 OR5AK3PQ8NH89 298 aa10.65□□□□□ -0.7
LIMS2-210ENST00000413578 MSI2Q96DH6 328 aaKnown RBP10.65□□□□□ -0.7
LIMS2-210ENST00000413578 SLC17A5Q9NRA2 495 aa10.65□□□□□ -0.7
LIMS2-210ENST00000413578 CTPS2Q9NRF8 586 aa10.65□□□□□ -0.7
LIMS2-210ENST00000413578 SERINC1Q9NRX5 453 aa10.65□□□□□ -0.7
LIMS2-210ENST00000413578 CHRNA9Q9UGM1 479 aa10.65□□□□□ -0.7
LIMS2-210ENST00000413578 DCTN4Q9UJW0 460 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms