RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 C12orf73Q69YU5 71 aa12.06□□□□□ -0.48
LITAF-203ENST00000413364 MZT2BQ6NZ67 158 aa12.06□□□□□ -0.48
LITAF-203ENST00000413364 RASSF6Q6ZTQ3 369 aa12.06□□□□□ -0.48
LITAF-203ENST00000413364 SLC46A3Q7Z3Q1 461 aa12.06□□□□□ -0.48
LITAF-203ENST00000413364 CA13Q8N1Q1 262 aa12.06□□□□□ -0.48
LITAF-203ENST00000413364 MORN4Q8NDC4 146 aa12.06□□□□□ -0.48
LITAF-203ENST00000413364 OR4K5Q8NGD3 323 aa12.06□□□□□ -0.48
LITAF-203ENST00000413364 OR5T3Q8NGG3 340 aa12.06□□□□□ -0.48
LITAF-203ENST00000413364 WBP1Q96G27 269 aa12.06□□□□□ -0.48
LITAF-203ENST00000413364 REG4Q9BYZ8 158 aa12.06□□□□□ -0.48
LITAF-203ENST00000413364 CHRDQ9H2X0 955 aa12.06□□□□□ -0.48
LITAF-203ENST00000413364 SMURF1Q9HCE7 757 aa12.06□□□□□ -0.48
LITAF-203ENST00000413364 CLN6Q9NWW5 311 aa12.06□□□□□ -0.48
LITAF-203ENST00000413364 MALT1Q9UDY8 824 aa12.06□□□□□ -0.48
LITAF-203ENST00000413364 PURGQ9UJV8 347 aaKnown RBP12.06□□□□□ -0.48
LITAF-203ENST00000413364 CBY1Q9Y3M2 126 aa12.06□□□□□ -0.48
LITAF-203ENST00000413364 DNASE2O00115 360 aaPredicted RBP12.05□□□□□ -0.48
LITAF-203ENST00000413364 TLR4O00206 839 aa12.05□□□□□ -0.48
LITAF-203ENST00000413364 AKAP8O43823 692 aaKnown RBP12.05□□□□□ -0.48
LITAF-203ENST00000413364 FCMRO60667 390 aa12.05□□□□□ -0.48
LITAF-203ENST00000413364 SLC43A1O75387 559 aa12.05□□□□□ -0.48
LITAF-203ENST00000413364 SOX14O95416 240 aa12.05□□□□□ -0.48
LITAF-203ENST00000413364 GPR75O95800 540 aa12.05□□□□□ -0.48
LITAF-203ENST00000413364 WNT1P04628 370 aa12.05□□□□□ -0.48
LITAF-203ENST00000413364 ACP2P11117 423 aa12.05□□□□□ -0.48
LITAF-203ENST00000413364 C21orf33P30042 268 aaPredicted RBP12.05□□□□□ -0.48
LITAF-203ENST00000413364 ATP12AP54707 1039 aa12.05□□□□□ -0.48
LITAF-203ENST00000413364 SNRPGP62308 76 aaKnown RBP12.05□□□□□ -0.48
LITAF-203ENST00000413364 SHC2P98077 582 aa12.05□□□□□ -0.48
LITAF-203ENST00000413364 CSTF1Q05048 431 aaKnown RBP12.05□□□□□ -0.48
LITAF-203ENST00000413364 LARS2Q15031 903 aaKnown RBP12.05□□□□□ -0.48
LITAF-203ENST00000413364 SYT16Q17RD7 645 aa12.05□□□□□ -0.48
LITAF-203ENST00000413364 ARHGAP11BQ3KRB8 267 aa12.05□□□□□ -0.48
LITAF-203ENST00000413364 TEX30Q5JUR7 227 aa12.05□□□□□ -0.48
LITAF-203ENST00000413364 FRRS1Q6ZNA5 592 aa12.05□□□□□ -0.48
LITAF-203ENST00000413364 FAM181AQ8N9Y4 354 aa12.05□□□□□ -0.48
LITAF-203ENST00000413364 TMEM52Q8NDY8 209 aa12.05□□□□□ -0.48
LITAF-203ENST00000413364 DUSP18Q8NEJ0 188 aa12.05□□□□□ -0.48
LITAF-203ENST00000413364 OR1M1Q8NGA1 313 aa12.05□□□□□ -0.48
LITAF-203ENST00000413364 OR52P1PQ8NH57 321 aa12.05□□□□□ -0.48
LITAF-203ENST00000413364 NANPQ8TBE9 248 aa12.05□□□□□ -0.48
LITAF-203ENST00000413364 MTHFD2LQ9H903 347 aaPredicted RBP12.05□□□□□ -0.48
LITAF-203ENST00000413364 FAM60AQ9NP50 221 aa12.05□□□□□ -0.48
LITAF-203ENST00000413364 C11orf16Q9NQ32 467 aa12.05□□□□□ -0.48
LITAF-203ENST00000413364 A0A087WV62 115 aa12.04□□□□□ -0.48
LITAF-203ENST00000413364 A0A1W2PR77 199 aa12.04□□□□□ -0.48
LITAF-203ENST00000413364 METTL12A8MUP2 240 aa12.04□□□□□ -0.48
LITAF-203ENST00000413364 WWP2O00308 870 aa12.04□□□□□ -0.48
LITAF-203ENST00000413364 FABP7O15540 132 aa12.04□□□□□ -0.48
LITAF-203ENST00000413364 HCRTR1O43613 425 aa12.04□□□□□ -0.48
LITAF-203ENST00000413364 TPST2O60704 377 aa12.04□□□□□ -0.48
LITAF-203ENST00000413364 LALBAP00709 142 aa12.04□□□□□ -0.48
LITAF-203ENST00000413364 PLATP00750 562 aa12.04□□□□□ -0.48
LITAF-203ENST00000413364 CSF2P04141 144 aa12.04□□□□□ -0.48
LITAF-203ENST00000413364 IGFBP1P08833 259 aaPredicted RBP12.04□□□□□ -0.48
LITAF-203ENST00000413364 STSP08842 583 aa12.04□□□□□ -0.48
LITAF-203ENST00000413364 MMP11P24347 488 aa12.04□□□□□ -0.48
LITAF-203ENST00000413364 MAZP56270 477 aaKnown RBP12.04□□□□□ -0.48
LITAF-203ENST00000413364 BPIFB3P59826 476 aa12.04□□□□□ -0.48
LITAF-203ENST00000413364 FZD5Q13467 585 aa12.04□□□□□ -0.48
LITAF-203ENST00000413364 DUSP5Q16690 384 aa12.04□□□□□ -0.48
LITAF-203ENST00000413364 TRMT12Q53H54 448 aaKnown RBP12.04□□□□□ -0.48
LITAF-203ENST00000413364 EXOSC6Q5RKV6 272 aaKnown RBP12.04□□□□□ -0.48
LITAF-203ENST00000413364 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.04□□□□□ -0.48
LITAF-203ENST00000413364 RAB11FIP2Q7L804 512 aa12.04□□□□□ -0.48
LITAF-203ENST00000413364 ZER1Q7Z7L7 766 aa12.04□□□□□ -0.48
LITAF-203ENST00000413364 GJD3Q8N144 294 aa12.04□□□□□ -0.48
LITAF-203ENST00000413364 AVL9Q8NBF6 648 aa12.04□□□□□ -0.48
LITAF-203ENST00000413364 NLGN4YQ8NFZ3 816 aaPredicted RBP12.04□□□□□ -0.48
LITAF-203ENST00000413364 NSMAFQ92636 917 aa12.04□□□□□ -0.48
LITAF-203ENST00000413364 PDCD10Q9BUL8 212 aa12.04□□□□□ -0.48
LITAF-203ENST00000413364 DPCDQ9BVM2 203 aaPredicted RBP12.04□□□□□ -0.48
LITAF-203ENST00000413364 ZCCHC4Q9H5U6 513 aa12.04□□□□□ -0.48
LITAF-203ENST00000413364 UFSP2Q9NUQ7 469 aa12.04□□□□□ -0.48
LITAF-203ENST00000413364 KLHL28Q9NXS3 571 aa12.04□□□□□ -0.48
LITAF-203ENST00000413364 CNOT2Q9NZN8 540 aaKnown RBP12.04□□□□□ -0.48
LITAF-203ENST00000413364 GPR55Q9Y2T6 319 aaPredicted RBP12.04□□□□□ -0.48
LITAF-203ENST00000413364 CHST2Q9Y4C5 530 aa12.04□□□□□ -0.48
LITAF-203ENST00000413364 H3BN98 237 aa12.04□□□□□ -0.48
LITAF-203ENST00000413364 SMLR1H3BR10 107 aa12.04□□□□□ -0.48
LITAF-203ENST00000413364 TNRC18O15417 2968 aaPredicted RBP12.04□□□□□ -0.48
LITAF-203ENST00000413364 PLOD3O60568 738 aa12.04□□□□□ -0.48
LITAF-203ENST00000413364 LDB3O75112 727 aa12.04□□□□□ -0.48
LITAF-203ENST00000413364 FCER2P06734 321 aa12.04□□□□□ -0.48
LITAF-203ENST00000413364 IFI6P09912 130 aa12.04□□□□□ -0.48
LITAF-203ENST00000413364 NME1P15531 152 aaKnown RBP12.04□□□□□ -0.48
LITAF-203ENST00000413364 RORAP35398 523 aa12.04□□□□□ -0.48
LITAF-203ENST00000413364 LIMK1P53667 647 aa12.04□□□□□ -0.48
LITAF-203ENST00000413364 RAB38P57729 211 aa12.04□□□□□ -0.48
LITAF-203ENST00000413364 TAS2R41P59536 307 aa12.04□□□□□ -0.48
LITAF-203ENST00000413364 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.04□□□□□ -0.48
LITAF-203ENST00000413364 ST3GAL4Q11206 333 aa12.04□□□□□ -0.48
LITAF-203ENST00000413364 COL9A2Q14055 689 aaPredicted RBP12.04□□□□□ -0.48
LITAF-203ENST00000413364 ELOCQ15369 112 aa12.04□□□□□ -0.48
LITAF-203ENST00000413364 CCDC85BQ15834 202 aaPredicted RBP12.04□□□□□ -0.48
LITAF-203ENST00000413364 TIGD6Q17RP2 521 aa12.04□□□□□ -0.48
LITAF-203ENST00000413364 C1orf94Q6P1W5 598 aa12.04□□□□□ -0.48
LITAF-203ENST00000413364 KRT74Q7RTS7 529 aa12.04□□□□□ -0.48
LITAF-203ENST00000413364 IQCHQ86VS3 1027 aa12.04□□□□□ -0.48
LITAF-203ENST00000413364 SHISA5Q8N114 240 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms