RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 IST1P53990 364 aa4.12□□□□□ -1.75
LSM5-205ENST00000409952 HMGCS2P54868 508 aa4.12□□□□□ -1.75
LSM5-205ENST00000409952 PAX9P55771 341 aa4.12□□□□□ -1.75
LSM5-205ENST00000409952 RAD51Q06609 339 aa4.12□□□□□ -1.75
LSM5-205ENST00000409952 RCAN2Q14206 197 aa4.12□□□□□ -1.75
LSM5-205ENST00000409952 FASTKD3Q14CZ7 662 aaKnown RBP4.12□□□□□ -1.75
LSM5-205ENST00000409952 MLF2Q15773 248 aaPredicted RBP4.12□□□□□ -1.75
LSM5-205ENST00000409952 ISXQ2M1V0 245 aa4.12□□□□□ -1.75
LSM5-205ENST00000409952 HSDL1Q3SXM5 330 aa4.12□□□□□ -1.75
LSM5-205ENST00000409952 KIAA1644Q3SXP7 199 aa4.12□□□□□ -1.75
LSM5-205ENST00000409952 XKR4Q5GH76 650 aa4.12□□□□□ -1.75
LSM5-205ENST00000409952 PVRIGQ6DKI7 326 aa4.12□□□□□ -1.75
LSM5-205ENST00000409952 C22orf42Q6IC83 251 aa4.12□□□□□ -1.75
LSM5-205ENST00000409952 APOOLQ6UXV4 268 aa4.12□□□□□ -1.75
LSM5-205ENST00000409952 FOXL2NBQ6ZUU3 175 aa4.12□□□□□ -1.75
LSM5-205ENST00000409952 SH2D5Q6ZV89 423 aa4.12□□□□□ -1.75
LSM5-205ENST00000409952 SLC16A14Q7RTX9 510 aa4.12□□□□□ -1.75
LSM5-205ENST00000409952 TRPT1Q86TN4 253 aaKnown RBP4.12□□□□□ -1.75
LSM5-205ENST00000409952 SLC47A2Q86VL8 602 aa4.12□□□□□ -1.75
LSM5-205ENST00000409952 CCDC65Q8IXS2 484 aa4.12□□□□□ -1.75
LSM5-205ENST00000409952 ST13P4Q8IZP2 240 aaPredicted RBP4.12□□□□□ -1.75
LSM5-205ENST00000409952 LSMEM2Q8N112 164 aa4.12□□□□□ -1.75
LSM5-205ENST00000409952 OR2L13Q8N349 312 aa4.12□□□□□ -1.75
LSM5-205ENST00000409952 ATP6V0D2Q8N8Y2 350 aa4.12□□□□□ -1.75
LSM5-205ENST00000409952 TMEM178AQ8NBL3 297 aa4.12□□□□□ -1.75
LSM5-205ENST00000409952 TMEM104Q8NE00 496 aa4.12□□□□□ -1.75
LSM5-205ENST00000409952 IL1F10Q8WWZ1 152 aa4.12□□□□□ -1.75
LSM5-205ENST00000409952 NR4A3Q92570 626 aa4.12□□□□□ -1.75
LSM5-205ENST00000409952 ARL5BQ96KC2 179 aa4.12□□□□□ -1.75
LSM5-205ENST00000409952 CABLES2Q9BTV7 478 aa4.12□□□□□ -1.75
LSM5-205ENST00000409952 RANBP3Q9H6Z4 567 aaPredicted RBP4.12□□□□□ -1.75
LSM5-205ENST00000409952 UGT1A10Q9HAW8 530 aa4.12□□□□□ -1.75
LSM5-205ENST00000409952 ADAP2Q9NPF8 381 aa4.12□□□□□ -1.75
LSM5-205ENST00000409952 DYRK4Q9NR20 520 aa4.12□□□□□ -1.75
LSM5-205ENST00000409952 NANSQ9NR45 359 aa4.12□□□□□ -1.75
LSM5-205ENST00000409952 NUDT15Q9NV35 164 aa4.12□□□□□ -1.75
LSM5-205ENST00000409952 GPATCH2LQ9NWQ4 482 aa4.12□□□□□ -1.75
LSM5-205ENST00000409952 TAAR2Q9P1P5 351 aa4.12□□□□□ -1.75
LSM5-205ENST00000409952 CD300AQ9UGN4 299 aa4.12□□□□□ -1.75
LSM5-205ENST00000409952 PHF11Q9UIL8 331 aa4.12□□□□□ -1.75
LSM5-205ENST00000409952 ICAM5Q9UMF0 924 aa4.12□□□□□ -1.75
LSM5-205ENST00000409952 BARX2Q9UMQ3 279 aaPredicted RBP4.12□□□□□ -1.75
LSM5-205ENST00000409952 EXOGQ9Y2C4 368 aaKnown RBP4.12□□□□□ -1.75
LSM5-205ENST00000409952 USP16Q9Y5T5 823 aa4.12□□□□□ -1.75
LSM5-205ENST00000409952 NEURL4Q96JN8 1562 aa4.11□□□□□ -1.75
LSM5-205ENST00000409952 GSTTP1A0A1W2PQM5 241 aa4.11□□□□□ -1.75
LSM5-205ENST00000409952 PRAC2D3DTV9 90 aa4.11□□□□□ -1.75
LSM5-205ENST00000409952 NR5A2O00482 541 aa4.11□□□□□ -1.75
LSM5-205ENST00000409952 TYROBPO43914 113 aa4.11□□□□□ -1.75
LSM5-205ENST00000409952 CHST1O43916 411 aa4.11□□□□□ -1.75
LSM5-205ENST00000409952 CXCL13O43927 109 aa4.11□□□□□ -1.75
LSM5-205ENST00000409952 HUS1O60921 280 aa4.11□□□□□ -1.75
LSM5-205ENST00000409952 AP2A2O94973 939 aa4.11□□□□□ -1.75
LSM5-205ENST00000409952 ZBTB11O95625 1053 aaPredicted RBP4.11□□□□□ -1.75
LSM5-205ENST00000409952 NUDT14O95848 222 aa4.11□□□□□ -1.75
LSM5-205ENST00000409952 OR9G9P0C7N8 305 aa4.11□□□□□ -1.75
LSM5-205ENST00000409952 ZNF853P0CG23 659 aa4.11□□□□□ -1.75
LSM5-205ENST00000409952 UBCP0CG48 685 aaKnown RBP4.11□□□□□ -1.75
LSM5-205ENST00000409952 MYL2P10916 166 aa4.11□□□□□ -1.75
LSM5-205ENST00000409952 CD1DP15813 335 aa4.11□□□□□ -1.75
LSM5-205ENST00000409952 SDC1P18827 310 aa4.11□□□□□ -1.75
LSM5-205ENST00000409952 POLR2EP19388 210 aaKnown RBP4.11□□□□□ -1.75
LSM5-205ENST00000409952 CCNOP22674 350 aa4.11□□□□□ -1.75
LSM5-205ENST00000409952 ETV5P41161 510 aa4.11□□□□□ -1.75
LSM5-205ENST00000409952 TSFMP43897 325 aaKnown RBP4.11□□□□□ -1.75
LSM5-205ENST00000409952 HSPA2P54652 639 aa4.11□□□□□ -1.75
LSM5-205ENST00000409952 DHODHQ02127 395 aa4.11□□□□□ -1.75
LSM5-205ENST00000409952 CDH17Q12864 832 aa4.11□□□□□ -1.75
LSM5-205ENST00000409952 GPR176Q14439 515 aa4.11□□□□□ -1.75
LSM5-205ENST00000409952 USF2Q15853 346 aaPredicted RBP4.11□□□□□ -1.75
LSM5-205ENST00000409952 ZIC1Q15915 447 aa4.11□□□□□ -1.75
LSM5-205ENST00000409952 LGSNQ5TDP6 509 aa4.11□□□□□ -1.75
LSM5-205ENST00000409952 GPR157Q5UAW9 335 aa4.11□□□□□ -1.75
LSM5-205ENST00000409952 FAM86B1Q8N7N1 296 aa4.11□□□□□ -1.75
LSM5-205ENST00000409952 STPG4Q8N801 248 aa4.11□□□□□ -1.75
LSM5-205ENST00000409952 ZNF781Q8N8C0 355 aa4.11□□□□□ -1.75
LSM5-205ENST00000409952 C8orf31Q8N9H6 132 aa4.11□□□□□ -1.75
LSM5-205ENST00000409952 KLHDC9Q8NEP7 349 aa4.11□□□□□ -1.75
LSM5-205ENST00000409952 OR52I1Q8NGK6 324 aa4.11□□□□□ -1.75
LSM5-205ENST00000409952 PLPPR1Q8TBJ4 325 aa4.11□□□□□ -1.75
LSM5-205ENST00000409952 PDCD6IPQ8WUM4 868 aaKnown RBP4.11□□□□□ -1.75
LSM5-205ENST00000409952 MRPS31Q92665 395 aaKnown RBP4.11□□□□□ -1.75
LSM5-205ENST00000409952 KCNA7Q96RP8 456 aa4.11□□□□□ -1.75
LSM5-205ENST00000409952 TM6SF2Q9BZW4 377 aa4.11□□□□□ -1.75
LSM5-205ENST00000409952 WDR41Q9HAD4 459 aa4.11□□□□□ -1.75
LSM5-205ENST00000409952 ELL3Q9HB65 397 aaPredicted RBP4.11□□□□□ -1.75
LSM5-205ENST00000409952 ADGRL4Q9HBW9 690 aa4.11□□□□□ -1.75
LSM5-205ENST00000409952 ZNF334Q9HCZ1 680 aaPredicted RBP4.11□□□□□ -1.75
LSM5-205ENST00000409952 UBAP1Q9NZ09 502 aa4.11□□□□□ -1.75
LSM5-205ENST00000409952 WRAP73Q9P2S5 460 aaPredicted RBP4.11□□□□□ -1.75
LSM5-205ENST00000409952 STAP1Q9ULZ2 295 aa4.11□□□□□ -1.75
LSM5-205ENST00000409952 USP47Q96K76 1375 aa4.11□□□□□ -1.75
LSM5-205ENST00000409952 IGHV4-4A0A075B6R2 117 aa4.1□□□□□ -1.75
LSM5-205ENST00000409952 IGHV3-20A0A0C4DH32 117 aa4.1□□□□□ -1.75
LSM5-205ENST00000409952 TRBV5-4A0A0C4DH59 114 aa4.1□□□□□ -1.75
LSM5-205ENST00000409952 IQANK1A0A1B0GTG1 560 aa4.1□□□□□ -1.75
LSM5-205ENST00000409952 C15orf61A6NNL5 157 aa4.1□□□□□ -1.75
LSM5-205ENST00000409952 IQCF5A8MTL0 148 aa4.1□□□□□ -1.75
LSM5-205ENST00000409952 PDZK1P1A8MUH7 402 aa4.1□□□□□ -1.75
LSM5-205ENST00000409952 SH3BGRLO75368 114 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms