RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 ADH6P28332 368 aa14.96□□□□□ -0.01
TSPAN4-208ENST00000409531 GCKP35557 465 aa14.96□□□□□ -0.01
TSPAN4-208ENST00000409531 RFC3P40938 356 aa14.96□□□□□ -0.01
TSPAN4-208ENST00000409531 SESN3P58005 492 aa14.96□□□□□ -0.01
TSPAN4-208ENST00000409531 ALDH6A1Q02252 535 aaKnown RBP14.96□□□□□ -0.01
TSPAN4-208ENST00000409531 OR1Q1Q15612 314 aa14.96□□□□□ -0.01
TSPAN4-208ENST00000409531 KRTCAP3Q53RY4 240 aa14.96□□□□□ -0.01
TSPAN4-208ENST00000409531 SWT1Q5T5J6 900 aaKnown RBP14.96□□□□□ -0.01
TSPAN4-208ENST00000409531 ULK3Q6PHR2 472 aa14.96□□□□□ -0.01
TSPAN4-208ENST00000409531 ARSKQ6UWY0 536 aa14.96□□□□□ -0.01
TSPAN4-208ENST00000409531 GRINAQ7Z429 371 aa14.96□□□□□ -0.01
TSPAN4-208ENST00000409531 OR14L1PQ8NHC6 308 aa14.96□□□□□ -0.01
TSPAN4-208ENST00000409531 ADAMTS16Q8TE57 1224 aa14.96□□□□□ -0.01
TSPAN4-208ENST00000409531 PHF10Q8WUB8 498 aaKnown RBP14.96□□□□□ -0.01
TSPAN4-208ENST00000409531 OR2B2Q9GZK3 357 aa14.96□□□□□ -0.01
TSPAN4-208ENST00000409531 ARMC1Q9NVT9 282 aa14.96□□□□□ -0.01
TSPAN4-208ENST00000409531 DNAJC13O75165 2243 aa14.96□□□□□ -0.01
TSPAN4-208ENST00000409531 MPDZO75970 2070 aa14.96□□□□□ -0.01
TSPAN4-208ENST00000409531 LINC01387J3KSC0 135 aa14.95□□□□□ -0.02
TSPAN4-208ENST00000409531 ADAMDEC1O15204 470 aa14.95□□□□□ -0.02
TSPAN4-208ENST00000409531 HNRNPRO43390 633 aaKnown RBP14.95□□□□□ -0.02
TSPAN4-208ENST00000409531 TPST2O60704 377 aa14.95□□□□□ -0.02
TSPAN4-208ENST00000409531 HPNP05981 417 aa14.95□□□□□ -0.02
TSPAN4-208ENST00000409531 THRBP10828 461 aa14.95□□□□□ -0.02
TSPAN4-208ENST00000409531 FCGR1AP12314 374 aa14.95□□□□□ -0.02
TSPAN4-208ENST00000409531 ZNF17P17021 662 aa14.95□□□□□ -0.02
TSPAN4-208ENST00000409531 MAGEA5P43359 124 aa14.95□□□□□ -0.02
TSPAN4-208ENST00000409531 DLX5P56178 289 aa14.95□□□□□ -0.02
TSPAN4-208ENST00000409531 SMIM11AP58511 58 aa14.95□□□□□ -0.02
TSPAN4-208ENST00000409531 ST3GAL3Q11203 375 aa14.95□□□□□ -0.02
TSPAN4-208ENST00000409531 SLC10A1Q14973 349 aa14.95□□□□□ -0.02
TSPAN4-208ENST00000409531 TOMM34Q15785 309 aaPredicted RBP14.95□□□□□ -0.02
TSPAN4-208ENST00000409531 SLC25A53Q5H9E4 307 aa14.95□□□□□ -0.02
TSPAN4-208ENST00000409531 GFRALQ6UXV0 394 aa14.95□□□□□ -0.02
TSPAN4-208ENST00000409531 ZGRF1Q86YA3 2104 aa14.95□□□□□ -0.02
TSPAN4-208ENST00000409531 FAM83FQ8NEG4 500 aaPredicted RBP14.95□□□□□ -0.02
TSPAN4-208ENST00000409531 PIP5K1AQ99755 562 aa14.95□□□□□ -0.02
TSPAN4-208ENST00000409531 PIGQQ9BRB3 760 aa14.95□□□□□ -0.02
TSPAN4-208ENST00000409531 FNDC11Q9BVV2 318 aa14.95□□□□□ -0.02
TSPAN4-208ENST00000409531 ZDHHC11Q9H8X9 412 aa14.95□□□□□ -0.02
TSPAN4-208ENST00000409531 C12orf10Q9HB07 376 aa14.95□□□□□ -0.02
TSPAN4-208ENST00000409531 ACKR4Q9NPB9 350 aa14.95□□□□□ -0.02
TSPAN4-208ENST00000409531 ACAD8Q9UKU7 415 aa14.95□□□□□ -0.02
TSPAN4-208ENST00000409531 A0A0B4J2E0 115 aa14.94□□□□□ -0.02
TSPAN4-208ENST00000409531 A0A1B0GWA3 101 aa14.94□□□□□ -0.02
TSPAN4-208ENST00000409531 A0A1B0GX12 115 aa14.94□□□□□ -0.02
TSPAN4-208ENST00000409531 ZIC3O60481 467 aa14.94□□□□□ -0.02
TSPAN4-208ENST00000409531 WISP2O76076 250 aa14.94□□□□□ -0.02
TSPAN4-208ENST00000409531 PNMTP11086 282 aa14.94□□□□□ -0.02
TSPAN4-208ENST00000409531 ELK4P28324 431 aa14.94□□□□□ -0.02
TSPAN4-208ENST00000409531 APOBEC1P41238 236 aaKnown RBP14.94□□□□□ -0.02
TSPAN4-208ENST00000409531 POLR2HP52434 150 aaKnown RBP14.94□□□□□ -0.02
TSPAN4-208ENST00000409531 MAP2K6P52564 334 aa14.94□□□□□ -0.02
TSPAN4-208ENST00000409531 ELF3P78545 371 aaPredicted RBP14.94□□□□□ -0.02
TSPAN4-208ENST00000409531 MERTKQ12866 999 aa14.94□□□□□ -0.02
TSPAN4-208ENST00000409531 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.94□□□□□ -0.02
TSPAN4-208ENST00000409531 IQCCQ4KMZ1 466 aa14.94□□□□□ -0.02
TSPAN4-208ENST00000409531 ALG10BQ5I7T1 473 aa14.94□□□□□ -0.02
TSPAN4-208ENST00000409531 RAET1LQ5VY80 246 aa14.94□□□□□ -0.02
TSPAN4-208ENST00000409531 AAGABQ6PD74 315 aa14.94□□□□□ -0.02
TSPAN4-208ENST00000409531 OFCC1Q8IZS5 231 aa14.94□□□□□ -0.02
TSPAN4-208ENST00000409531 GTPBP8Q8N3Z3 284 aaPredicted RBP14.94□□□□□ -0.02
TSPAN4-208ENST00000409531 PYDC1Q8WXC3 89 aa14.94□□□□□ -0.02
TSPAN4-208ENST00000409531 SLCO4A1Q96BD0 722 aa14.94□□□□□ -0.02
TSPAN4-208ENST00000409531 C3orf49Q96BT1 292 aa14.94□□□□□ -0.02
TSPAN4-208ENST00000409531 SLC41A3Q96GZ6 507 aa14.94□□□□□ -0.02
TSPAN4-208ENST00000409531 MPP4Q96JB8 637 aa14.94□□□□□ -0.02
TSPAN4-208ENST00000409531 KLHDC3Q9BQ90 382 aa14.94□□□□□ -0.02
TSPAN4-208ENST00000409531 PRR14Q9BWN1 585 aa14.94□□□□□ -0.02
TSPAN4-208ENST00000409531 ADAM19Q9H013 955 aa14.94□□□□□ -0.02
TSPAN4-208ENST00000409531 STOML1Q9UBI4 398 aa14.94□□□□□ -0.02
TSPAN4-208ENST00000409531 RIMS3Q9UJD0 308 aa14.94□□□□□ -0.02
TSPAN4-208ENST00000409531 A4GNTQ9UNA3 340 aa14.94□□□□□ -0.02
TSPAN4-208ENST00000409531 ZNF407Q9C0G0 2248 aa14.94□□□□□ -0.02
TSPAN4-208ENST00000409531 ELOA3DA6NLF2 546 aaPredicted RBP14.93□□□□□ -0.02
TSPAN4-208ENST00000409531 NPIPA5E9PKD4 350 aa14.93□□□□□ -0.02
TSPAN4-208ENST00000409531 CHP2O43745 196 aa14.93□□□□□ -0.02
TSPAN4-208ENST00000409531 DEAF1O75398 565 aaPredicted RBP14.93□□□□□ -0.02
TSPAN4-208ENST00000409531 KRT36O76013 467 aa14.93□□□□□ -0.02
TSPAN4-208ENST00000409531 CST1P01037 141 aa14.93□□□□□ -0.02
TSPAN4-208ENST00000409531 MT-ND1P03886 318 aa14.93□□□□□ -0.02
TSPAN4-208ENST00000409531 CXCR1P25024 350 aa14.93□□□□□ -0.02
TSPAN4-208ENST00000409531 FKBP2P26885 142 aaKnown RBP14.93□□□□□ -0.02
TSPAN4-208ENST00000409531 TACR3P29371 465 aa14.93□□□□□ -0.02
TSPAN4-208ENST00000409531 YAP1P46937 504 aaKnown RBP14.93□□□□□ -0.02
TSPAN4-208ENST00000409531 FOXF1Q12946 379 aa14.93□□□□□ -0.02
TSPAN4-208ENST00000409531 PIN1Q13526 163 aaPredicted RBP14.93□□□□□ -0.02
TSPAN4-208ENST00000409531 ELOA3BQ3SY89 546 aa14.93□□□□□ -0.02
TSPAN4-208ENST00000409531 RNFT1Q5M7Z0 435 aa14.93□□□□□ -0.02
TSPAN4-208ENST00000409531 TSEN54Q7Z6J9 526 aaKnown RBP14.93□□□□□ -0.02
TSPAN4-208ENST00000409531 SIAH3Q8IW03 269 aa14.93□□□□□ -0.02
TSPAN4-208ENST00000409531 ELOA3Q8NG57 546 aa14.93□□□□□ -0.02
TSPAN4-208ENST00000409531 RNF217Q8TC41 542 aa14.93□□□□□ -0.02
TSPAN4-208ENST00000409531 SLC38A4Q969I6 547 aa14.93□□□□□ -0.02
TSPAN4-208ENST00000409531 GPR137Q96N19 417 aa14.93□□□□□ -0.02
TSPAN4-208ENST00000409531 ANKRD19PQ9H560 264 aa14.93□□□□□ -0.02
TSPAN4-208ENST00000409531 CTPS2Q9NRF8 586 aa14.93□□□□□ -0.02
TSPAN4-208ENST00000409531 SERINC1Q9NRX5 453 aa14.93□□□□□ -0.02
TSPAN4-208ENST00000409531 SLC7A7Q9UM01 511 aa14.93□□□□□ -0.02
TSPAN4-208ENST00000409531 NPIPA1Q9UND3 350 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms