RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 KLHL26Q53HC5 615 aa5.42□□□□□ -1.54
R3HDM1-202ENST00000409478 TMEM69Q5SWH9 247 aa5.42□□□□□ -1.54
R3HDM1-202ENST00000409478 EEF1A1P5Q5VTE0 462 aa5.42□□□□□ -1.54
R3HDM1-202ENST00000409478 GLT8D1Q68CQ7 371 aa5.42□□□□□ -1.54
R3HDM1-202ENST00000409478 DMKNQ6E0U4 476 aaPredicted RBP5.42□□□□□ -1.54
R3HDM1-202ENST00000409478 IL34Q6ZMJ4 242 aa5.42□□□□□ -1.54
R3HDM1-202ENST00000409478 ZNF813Q6ZN06 617 aa5.42□□□□□ -1.54
R3HDM1-202ENST00000409478 TPGS1Q6ZTW0 290 aa5.42□□□□□ -1.54
R3HDM1-202ENST00000409478 CHST9Q7L1S5 443 aa5.42□□□□□ -1.54
R3HDM1-202ENST00000409478 ABHD13Q7L211 337 aa5.42□□□□□ -1.54
R3HDM1-202ENST00000409478 CPOQ8IVL8 374 aa5.42□□□□□ -1.54
R3HDM1-202ENST00000409478 DCUN1D3Q8IWE4 304 aa5.42□□□□□ -1.54
R3HDM1-202ENST00000409478 OR10H4Q8NGA5 316 aa5.42□□□□□ -1.54
R3HDM1-202ENST00000409478 OR6J1Q8NGC5 347 aa5.42□□□□□ -1.54
R3HDM1-202ENST00000409478 BBS10Q8TAM1 723 aa5.42□□□□□ -1.54
R3HDM1-202ENST00000409478 HMGB4Q8WW32 186 aa5.42□□□□□ -1.54
R3HDM1-202ENST00000409478 PHYHIPQ92561 330 aa5.42□□□□□ -1.54
R3HDM1-202ENST00000409478 EXOSC8Q96B26 276 aaKnown RBP5.42□□□□□ -1.54
R3HDM1-202ENST00000409478 MED8Q96G25 268 aa5.42□□□□□ -1.54
R3HDM1-202ENST00000409478 PEX11GQ96HA9 241 aa5.42□□□□□ -1.54
R3HDM1-202ENST00000409478 FAM46AQ96IP4 442 aaKnown RBP5.42□□□□□ -1.54
R3HDM1-202ENST00000409478 WFDC6Q9BQY6 131 aa5.42□□□□□ -1.54
R3HDM1-202ENST00000409478 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.42□□□□□ -1.54
R3HDM1-202ENST00000409478 KRCC1Q9NPI7 259 aaPredicted RBP5.42□□□□□ -1.54
R3HDM1-202ENST00000409478 TAS2R8Q9NYW2 309 aa5.42□□□□□ -1.54
R3HDM1-202ENST00000409478 DHCR7Q9UBM7 475 aaKnown RBP5.42□□□□□ -1.54
R3HDM1-202ENST00000409478 KLK11Q9UBX7 282 aa5.42□□□□□ -1.54
R3HDM1-202ENST00000409478 NLRC5Q86WI3 1866 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 UTRNP46939 3433 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 MEIS3P2A8K0S8 358 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 H3BNC9 293 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 SOCS6O14544 535 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 FGF16O43320 207 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 GREM1O60565 184 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 SLC25A12O75746 678 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 PCDH8O95206 1070 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 CD8AP01732 235 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 EPCAMP16422 314 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 NT5EP21589 574 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 AHRP35869 848 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 GPX4P36969 197 aaPredicted RBP5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 OMPP47874 163 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 P2RX1P51575 399 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 RAB2AP61019 212 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 FABP9Q0Z7S8 132 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 ZNF311Q5JNZ3 666 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 ACER2Q5QJU3 275 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 ZNF697Q5TEC3 545 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 DCAF12L2Q5VW00 463 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 LPCAT3Q6P1A2 487 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 NIPAL3Q6P499 406 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 TMEM71Q6P5X7 295 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 C6orf120Q7Z4R8 191 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 MUC20Q8N307 709 aaPredicted RBP5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 OR6T1Q8NGN1 323 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 CCDC107Q8WV48 283 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 TIMP4Q99727 224 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 RSPO3Q9BXY4 272 aaPredicted RBP5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 TLNRD1Q9H1K6 362 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 NRIP3Q9NQ35 241 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 HINT3Q9NQE9 182 aaKnown RBP5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 CNIH4Q9P003 139 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 LHX3Q9UBR4 397 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 PRKAB1Q9Y478 270 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 SLC22A31A6NKX4 558 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 ZNF879B4DU55 563 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 ICOSLGO75144 302 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 ZNF821O75541 412 aaPredicted RBP5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 CLDN7O95471 211 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 RLN1P04808 185 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 GJA1P17302 382 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 TBXA2RP21731 343 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 XPAP23025 273 aaPredicted RBP5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 MANFP55145 182 aaKnown RBP5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 ACTC1P68032 377 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 ACTA1P68133 377 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 RELQ04864 619 aaPredicted RBP5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 ST3GAL3Q11203 375 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 ILF3Q12906 894 aaKnown RBP eCLIP5.41□□□□□ -1.543e-8■■■■■ 28.1
R3HDM1-202ENST00000409478 PON3Q15166 354 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 C2orf68Q2NKX9 166 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 RTP2Q5QGT7 225 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 RPL13AP3Q6NVV1 102 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 FAM199XQ6PEV8 388 aaPredicted RBP5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 AGTRAPQ6RW13 159 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 FAM111BQ6SJ93 734 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 TMEM200AQ86VY9 491 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 BEST3Q8N1M1 668 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 TMEM99Q8N816 258 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 OR6N1Q8NGY5 312 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 GHSRQ92847 366 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 RAB8BQ92930 207 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 SLC25A28Q96A46 364 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 SUSD3Q96L08 255 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 VRK1Q99986 396 aaPredicted RBP5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 SGIP1Q9BQI5 828 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 ORAI3Q9BRQ5 295 aa5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 ALX4Q9H161 411 aaPredicted RBP5.41□□□□□ -1.54
R3HDM1-202ENST00000409478 BRD9Q9H8M2 597 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms